Mutagenetix > Incidental Mutation

Incidental Mutation 'R6836:Bpifb5'

534551

Institutional Source

Beutler Lab

Gene Symbol

Bpifb5

Ensembl Gene

ENSMUSG00000038572

Gene Name

BPI fold containing family B, member 5

Synonyms

BC018465

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R6836 (G1)

Quality Score

214.009

Status

Validated

Chromosome

Chromosomal Location

154065662-154082822 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 154069985 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 145 (I145N)

Ref Sequence

ENSEMBL: ENSMUSP00000046683 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045959]

AlphaFold

Q3UQ05

Predicted Effect

probably benign
Transcript: ENSMUST00000045959
AA Change: I145N

PolyPhen 2 Score 0.019 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000046683
Gene: ENSMUSG00000038572
AA Change: I145N

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
coiled coil region	26	54	N/A	INTRINSIC
Pfam:LBP_BPI_CETP	94	231	7.6e-14	PFAM
Blast:BPI2	291	488	4e-91	BLAST
SCOP:d1ewfa2	433	486	8e-3	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 97.9%

Validation Efficiency

100% (62/62)

Allele List at MGI

All alleles(1) : Targeted, other(1)

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamtsl2	T	C	2: 26,971,718 (GRCm39)	M1T	probably null	Het
Aim2	C	G	1: 173,291,546 (GRCm39)	T317R	probably damaging	Het
Alox8	T	C	11: 69,077,331 (GRCm39)	Y473C	probably damaging	Het
Alox8	T	C	11: 69,080,715 (GRCm39)	R209G	possibly damaging	Het
Asb5	A	G	8: 55,038,106 (GRCm39)	M210V	probably benign	Het
Atp2c2	T	A	8: 120,461,154 (GRCm39)	L249Q	probably damaging	Het
AU018091	T	G	7: 3,213,986 (GRCm39)	D77A	probably damaging	Het
Bahcc1	A	T	11: 120,162,583 (GRCm39)	K294*	probably null	Het
Baz2b	C	T	2: 59,747,769 (GRCm39)	R1298Q	probably damaging	Het
Bivm	T	A	1: 44,182,296 (GRCm39)	N501K	possibly damaging	Het
Casq2	A	T	3: 101,994,076 (GRCm39)	N41I	probably damaging	Het
Ccdc18	T	C	5: 108,345,833 (GRCm39)	L993P	probably damaging	Het
Cdcp3	A	T	7: 130,798,233 (GRCm39)	I81F	possibly damaging	Het
Cfap44	A	G	16: 44,224,442 (GRCm39)	D50G	probably damaging	Het
Clca3a2	T	A	3: 144,512,144 (GRCm39)	I91F	probably damaging	Het
Crebbp	T	A	16: 3,997,886 (GRCm39)	H66L	possibly damaging	Het
Cyfip2	T	C	11: 46,163,467 (GRCm39)	T321A	probably benign	Het
Dido1	A	G	2: 180,304,100 (GRCm39)	V1268A	probably benign	Het
E030030I06Rik	A	C	10: 22,024,391 (GRCm39)	V174G	probably damaging	Het
Gm20730	G	T	6: 43,058,767 (GRCm39)		probably null	Het
Gm36176	T	C	10: 77,682,976 (GRCm39)		probably benign	Het
Gper1	T	A	5: 139,412,435 (GRCm39)	M260K	probably damaging	Het
Igfbp2	T	C	1: 72,888,817 (GRCm39)	L89P	probably damaging	Het
Katnal1	T	C	5: 148,830,974 (GRCm39)	N200S	probably damaging	Het
Kcnk13	G	T	12: 100,027,948 (GRCm39)	R341L	probably damaging	Het
Klhl20	T	A	1: 160,932,976 (GRCm39)	E277D	probably benign	Het
Lingo1	T	C	9: 56,527,056 (GRCm39)	Y517C	probably damaging	Het
Lrrk1	C	T	7: 65,992,527 (GRCm39)	E82K	probably benign	Het
Mtor	T	A	4: 148,573,955 (GRCm39)	V1275D	possibly damaging	Het
Ncan	C	T	8: 70,552,965 (GRCm39)	S1089N	possibly damaging	Het
Notch4	C	T	17: 34,805,074 (GRCm39)	T1643I	probably damaging	Het
Or13a25	A	C	7: 140,248,093 (GRCm39)	I298L	possibly damaging	Het
Or1i2	A	G	10: 78,448,424 (GRCm39)	L17P	probably damaging	Het
Or2y15	A	T	11: 49,350,904 (GRCm39)	T133S	possibly damaging	Het
Or4c10	T	C	2: 89,760,683 (GRCm39)	C177R	probably damaging	Het
Pcdhgb6	T	C	18: 37,876,015 (GRCm39)	V241A	probably benign	Het
Phf11b	T	A	14: 59,565,572 (GRCm39)	T102S	possibly damaging	Het
Pkd1	T	A	17: 24,800,233 (GRCm39)	V2998E	probably damaging	Het
Ppp1r13b	T	C	12: 111,801,629 (GRCm39)	S352G	probably benign	Het
Ptprh	C	T	7: 4,554,134 (GRCm39)	V778M	probably damaging	Het
Ptprz1	C	T	6: 23,030,664 (GRCm39)	Q1008*	probably null	Het
Ralgapa1	A	T	12: 55,651,058 (GRCm39)		probably null	Het
Rbm20	G	A	19: 53,802,500 (GRCm39)	G336E	probably damaging	Het
Sdsl	T	C	5: 120,600,167 (GRCm39)	I77V	probably benign	Het
Serpina3b	G	A	12: 104,100,341 (GRCm39)	E308K	probably benign	Het
Sfrp5	G	A	19: 42,190,149 (GRCm39)	T101I	probably damaging	Het
Slc2a13	C	T	15: 91,205,835 (GRCm39)	V451I	probably benign	Het
Slc6a9	C	T	4: 117,725,083 (GRCm39)	A559V	possibly damaging	Het
Spg11	C	T	2: 121,890,016 (GRCm39)	A2109T	probably damaging	Het
Stard9	C	T	2: 120,530,324 (GRCm39)	R2194C	probably benign	Het
Tfeb	T	C	17: 48,097,123 (GRCm39)		probably null	Het
Tiam2	T	A	17: 3,464,655 (GRCm39)	I128N	probably benign	Het
Tmem161b	C	A	13: 84,370,537 (GRCm39)		probably benign	Het
Tpr	T	G	1: 150,312,424 (GRCm39)		probably null	Het
Traf3ip1	T	C	1: 91,448,722 (GRCm39)	I456T	probably benign	Het
Ttll4	T	A	1: 74,728,572 (GRCm39)	D892E	probably damaging	Het
Ubr1	T	A	2: 120,727,156 (GRCm39)		probably null	Het
Vmn2r74	T	A	7: 85,606,630 (GRCm39)	I239F	probably benign	Het
Wdfy3	C	T	5: 102,100,865 (GRCm39)	V251M	probably damaging	Het
Xylb	T	A	9: 119,220,820 (GRCm39)	L531H	probably damaging	Het
Zfp960	T	A	17: 17,308,434 (GRCm39)	C383S	probably damaging	Het

Other mutations in Bpifb5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01543:Bpifb5	APN	2	154,075,169 (GRCm39)	missense	possibly damaging	0.86
IGL01676:Bpifb5	APN	2	154,070,969 (GRCm39)	missense	possibly damaging	0.71
IGL02065:Bpifb5	APN	2	154,069,103 (GRCm39)	missense	probably damaging	0.98
IGL02141:Bpifb5	APN	2	154,071,477 (GRCm39)	splice site	probably null
IGL02244:Bpifb5	APN	2	154,067,068 (GRCm39)	missense	possibly damaging	0.93
IGL03118:Bpifb5	APN	2	154,078,673 (GRCm39)	splice site	probably benign
A4554:Bpifb5	UTSW	2	154,069,100 (GRCm39)	missense	possibly damaging	0.71
R0022:Bpifb5	UTSW	2	154,072,268 (GRCm39)	missense	probably damaging	0.98
R0492:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0654:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0692:Bpifb5	UTSW	2	154,076,616 (GRCm39)	missense	probably benign	0.33
R0707:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0898:Bpifb5	UTSW	2	154,075,254 (GRCm39)	missense	probably benign
R1534:Bpifb5	UTSW	2	154,071,419 (GRCm39)	missense	possibly damaging	0.86
R1539:Bpifb5	UTSW	2	154,065,776 (GRCm39)	missense	probably benign
R1874:Bpifb5	UTSW	2	154,069,122 (GRCm39)	splice site	probably benign
R1971:Bpifb5	UTSW	2	154,072,264 (GRCm39)	missense	probably benign	0.18
R2001:Bpifb5	UTSW	2	154,075,199 (GRCm39)	missense	possibly damaging	0.53
R3013:Bpifb5	UTSW	2	154,070,775 (GRCm39)	missense	possibly damaging	0.59
R3916:Bpifb5	UTSW	2	154,070,101 (GRCm39)	missense	probably benign
R4499:Bpifb5	UTSW	2	154,082,678 (GRCm39)	missense	possibly damaging	0.53
R5250:Bpifb5	UTSW	2	154,066,881 (GRCm39)	missense	probably benign
R6301:Bpifb5	UTSW	2	154,072,139 (GRCm39)	missense	possibly damaging	0.73
R6869:Bpifb5	UTSW	2	154,075,143 (GRCm39)	missense	probably benign	0.33
R7014:Bpifb5	UTSW	2	154,066,876 (GRCm39)	nonsense	probably null
R7300:Bpifb5	UTSW	2	154,070,066 (GRCm39)	missense	possibly damaging	0.85
R7427:Bpifb5	UTSW	2	154,067,042 (GRCm39)	missense	probably benign
R7428:Bpifb5	UTSW	2	154,067,042 (GRCm39)	missense	probably benign
R7439:Bpifb5	UTSW	2	154,070,853 (GRCm39)	missense	possibly damaging	0.71
R7448:Bpifb5	UTSW	2	154,072,105 (GRCm39)	missense	possibly damaging	0.53
R7935:Bpifb5	UTSW	2	154,070,975 (GRCm39)	missense	probably benign	0.01
R8964:Bpifb5	UTSW	2	154,072,198 (GRCm39)	missense	possibly damaging	0.96
R9049:Bpifb5	UTSW	2	154,070,096 (GRCm39)	missense	probably benign	0.00
R9058:Bpifb5	UTSW	2	154,080,817 (GRCm39)	missense	possibly damaging	0.85
R9349:Bpifb5	UTSW	2	154,067,005 (GRCm39)	missense	possibly damaging	0.96
T0975:Bpifb5	UTSW	2	154,071,384 (GRCm39)	splice site	probably null

Predicted Primers

PCR Primer
(F):5'- ACACTCAGTGCAGGTGTCTG -3'
(R):5'- TTTGAAGGAGAGGCAGCCCTAG -3'

Sequencing Primer
(F):5'- CTGCTGCCCTTGTGAGGATC -3'
(R):5'- CCACTGCAGAAAGGGCTG -3'

Posted On

2018-09-12