Mutagenetix > Incidental Mutation

Incidental Mutation 'R6853:Cyp2c38'

535126

Institutional Source

Beutler Lab

Gene Symbol

Cyp2c38

Ensembl Gene

ENSMUSG00000032808

Gene Name

cytochrome P450, family 2, subfamily c, polypeptide 38

Synonyms

MMRRC Submission

044956-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.070) question?

Stock #

R6853 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

39379109-39451519 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 39426748 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Histidine at position 184 (Q184H)

Ref Sequence

ENSEMBL: ENSMUSP00000044722 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035488]

AlphaFold

P56655

Predicted Effect

probably benign
Transcript: ENSMUST00000035488
AA Change: Q184H

PolyPhen 2 Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000044722
Gene: ENSMUSG00000032808
AA Change: Q184H

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
Pfam:p450	30	487	1.5e-161	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 98.0%

Validation Efficiency

98% (63/64)

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
6030458C11Rik	G	T	15: 12,818,031 (GRCm39)	D138E	probably benign	Het
Atp13a5	A	G	16: 29,140,480 (GRCm39)	S359P	possibly damaging	Het
Bcam	T	C	7: 19,494,331 (GRCm39)	D355G	probably damaging	Het
Bmp8a	C	A	4: 123,236,476 (GRCm39)	W9L	unknown	Het
Cacul1	A	T	19: 60,517,904 (GRCm39)	Y334*	probably null	Het
Ccdc178	A	T	18: 22,242,933 (GRCm39)	N227K	probably benign	Het
Ceacam2	T	C	7: 25,217,561 (GRCm39)	N318S	possibly damaging	Het
Cntrl	T	A	2: 35,019,833 (GRCm39)	S553R	possibly damaging	Het
Ctsa	T	A	2: 164,679,284 (GRCm39)	M331K	probably benign	Het
Cyp2c70	C	T	19: 40,172,364 (GRCm39)	E93K	possibly damaging	Het
D430041D05Rik	C	T	2: 104,071,500 (GRCm39)	V1267M	probably damaging	Het
Ddias	C	T	7: 92,508,773 (GRCm39)	A381T	possibly damaging	Het
Dnhd1	G	A	7: 105,352,935 (GRCm39)	C2696Y	probably benign	Het
Efr3a	G	A	15: 65,701,679 (GRCm39)	V198I	probably benign	Het
Farp2	T	C	1: 93,497,738 (GRCm39)	F256S	probably damaging	Het
Fga	A	G	3: 82,938,219 (GRCm39)	Y198C	probably damaging	Het
Gabpa	T	A	16: 84,657,387 (GRCm39)	C421S	probably damaging	Het
Gm21798	A	T	15: 64,689,714 (GRCm39)		probably benign	Het
Gm21798	A	T	15: 64,689,716 (GRCm39)		probably benign	Het
Gm7145	A	C	1: 117,913,874 (GRCm39)	N252T	possibly damaging	Het
H2-Q6	T	C	17: 35,647,335 (GRCm39)	*327R	probably null	Het
H6pd	T	C	4: 150,066,919 (GRCm39)	D489G	probably benign	Het
Htra2	A	G	6: 83,030,812 (GRCm39)		probably benign	Het
Ice1	T	G	13: 70,751,421 (GRCm39)	E1555A	possibly damaging	Het
Inpp5d	T	A	1: 87,609,402 (GRCm39)		probably null	Het
Itih2	T	C	2: 10,120,077 (GRCm39)	D320G	probably damaging	Het
Kif1a	T	G	1: 92,967,524 (GRCm39)	H1129P	possibly damaging	Het
Kmt2a	G	A	9: 44,729,704 (GRCm39)		probably benign	Het
L3mbtl4	G	A	17: 69,084,915 (GRCm39)	D609N	probably damaging	Het
Lgals9	A	T	11: 78,856,832 (GRCm39)	D248E	probably benign	Het
Lhx9	ACC	ACCC	1: 138,769,544 (GRCm39)		probably null	Het
Msh3	A	G	13: 92,449,080 (GRCm39)		probably null	Het
Mtus2	A	G	5: 148,043,821 (GRCm39)	K803R	probably damaging	Het
Oas1a	T	A	5: 121,045,491 (GRCm39)	I17L	possibly damaging	Het
Or2h2c	G	A	17: 37,422,400 (GRCm39)	T158I	probably benign	Het
Or5b121	T	A	19: 13,507,295 (GRCm39)	I130K	possibly damaging	Het
Or5k15	C	T	16: 58,710,121 (GRCm39)	S154N	possibly damaging	Het
Or5k15	T	A	16: 58,710,122 (GRCm39)	S154C	probably damaging	Het
Or7g32	T	G	9: 19,408,102 (GRCm39)	Y19*	probably null	Het
Otof	T	C	5: 30,545,583 (GRCm39)	D539G	probably damaging	Het
Pabpc4	T	C	4: 123,188,536 (GRCm39)	Y382H	possibly damaging	Het
Rag1	T	C	2: 101,472,566 (GRCm39)	T859A	probably damaging	Het
Ralbp1	C	T	17: 66,159,751 (GRCm39)	R504H	possibly damaging	Het
Sdk2	A	G	11: 113,671,755 (GRCm39)	F2131S	probably damaging	Het
Sik1	A	T	17: 32,073,180 (GRCm39)		probably null	Het
Sis	A	G	3: 72,798,759 (GRCm39)	I1763T	possibly damaging	Het
Slc39a6	A	G	18: 24,732,376 (GRCm39)	I304T	possibly damaging	Het
Slc5a12	A	G	2: 110,454,539 (GRCm39)	S367G	probably benign	Het
Smchd1	A	T	17: 71,743,738 (GRCm39)	W476R	probably damaging	Het
Spag17	T	C	3: 99,920,551 (GRCm39)	Y429H	possibly damaging	Het
Stt3a	G	A	9: 36,653,023 (GRCm39)	S553F	possibly damaging	Het
Sult2a1	C	T	7: 13,535,412 (GRCm39)	V214I	possibly damaging	Het
Supt6	T	C	11: 78,123,656 (GRCm39)	E38G	possibly damaging	Het
Tenm4	G	A	7: 96,486,502 (GRCm39)	G990R	possibly damaging	Het
Thop1	T	C	10: 80,911,495 (GRCm39)		probably null	Het
Thumpd2	C	A	17: 81,372,459 (GRCm39)	D11Y	possibly damaging	Het
Tmf1	T	G	6: 97,145,810 (GRCm39)	I574L	probably damaging	Het
Tnfaip3	A	G	10: 18,879,499 (GRCm39)	V623A	probably benign	Het
Ttll3	CAAAGTAA	CAAAGTAAAGTAA	6: 113,376,118 (GRCm39)		probably null	Het
Ush2a	T	G	1: 188,643,434 (GRCm39)	Y4265*	probably null	Het
Vamp5	G	A	6: 72,357,424 (GRCm39)		probably benign	Het
Vmn2r12	A	T	5: 109,240,771 (GRCm39)	L114Q	probably damaging	Het
Vmn2r98	A	T	17: 19,286,063 (GRCm39)	Y187F	probably benign	Het

Other mutations in Cyp2c38

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00508:Cyp2c38	APN	19	39,449,169 (GRCm39)	nonsense	probably null
IGL01109:Cyp2c38	APN	19	39,451,329 (GRCm39)	critical splice donor site	probably null
IGL01521:Cyp2c38	APN	19	39,449,114 (GRCm39)	missense	probably damaging	0.99
IGL02036:Cyp2c38	APN	19	39,448,760 (GRCm39)	missense	probably null	0.97
IGL02187:Cyp2c38	APN	19	39,424,649 (GRCm39)	missense	probably benign	0.14
IGL02954:Cyp2c38	APN	19	39,379,520 (GRCm39)	missense	probably damaging	0.99
R0479:Cyp2c38	UTSW	19	39,451,449 (GRCm39)	missense	probably damaging	0.99
R0684:Cyp2c38	UTSW	19	39,379,500 (GRCm39)	missense	probably damaging	0.99
R0919:Cyp2c38	UTSW	19	39,393,113 (GRCm39)	missense	probably benign	0.07
R1462:Cyp2c38	UTSW	19	39,380,632 (GRCm39)	missense	probably damaging	0.96
R1462:Cyp2c38	UTSW	19	39,380,632 (GRCm39)	missense	probably damaging	0.96
R1642:Cyp2c38	UTSW	19	39,390,153 (GRCm39)	missense	probably damaging	1.00
R1715:Cyp2c38	UTSW	19	39,393,239 (GRCm39)	missense	probably benign	0.25
R1900:Cyp2c38	UTSW	19	39,426,756 (GRCm39)	missense	probably benign	0.40
R1954:Cyp2c38	UTSW	19	39,393,131 (GRCm39)	missense	probably damaging	0.99
R1955:Cyp2c38	UTSW	19	39,393,131 (GRCm39)	missense	probably damaging	0.99
R2860:Cyp2c38	UTSW	19	39,449,138 (GRCm39)	missense	probably benign	0.01
R2861:Cyp2c38	UTSW	19	39,449,138 (GRCm39)	missense	probably benign	0.01
R2862:Cyp2c38	UTSW	19	39,449,138 (GRCm39)	missense	probably benign	0.01
R3084:Cyp2c38	UTSW	19	39,390,145 (GRCm39)	missense	probably benign	0.00
R3727:Cyp2c38	UTSW	19	39,380,739 (GRCm39)	splice site	probably benign
R4648:Cyp2c38	UTSW	19	39,449,132 (GRCm39)	missense	probably benign	0.05
R5119:Cyp2c38	UTSW	19	39,449,065 (GRCm39)	missense	probably damaging	1.00
R5636:Cyp2c38	UTSW	19	39,426,750 (GRCm39)	nonsense	probably null
R5651:Cyp2c38	UTSW	19	39,449,156 (GRCm39)	missense	probably damaging	0.99
R6263:Cyp2c38	UTSW	19	39,380,659 (GRCm39)	missense	probably damaging	1.00
R6384:Cyp2c38	UTSW	19	39,380,737 (GRCm39)	splice site	probably null
R6915:Cyp2c38	UTSW	19	39,424,512 (GRCm39)	missense	probably damaging	0.99
R7201:Cyp2c38	UTSW	19	39,390,220 (GRCm39)	missense	probably damaging	1.00
R7570:Cyp2c38	UTSW	19	39,393,187 (GRCm39)	missense	possibly damaging	0.76
R7625:Cyp2c38	UTSW	19	39,451,368 (GRCm39)	missense	possibly damaging	0.78
R7666:Cyp2c38	UTSW	19	39,426,686 (GRCm39)	missense	possibly damaging	0.52
R8681:Cyp2c38	UTSW	19	39,390,135 (GRCm39)	missense	possibly damaging	0.70

Predicted Primers

PCR Primer
(F):5'- AACCAAGTTGCCTTGTCACCTC -3'
(R):5'- ATAACAAATGCTGAGCTGTGAG -3'

Sequencing Primer
(F):5'- GTCACCTCACTTTTTGGTCCATATTG -3'
(R):5'- TGCTGAGCTGTGAGGAAAATTG -3'

Posted On

2018-09-12