Mutagenetix > Incidental Mutation

Incidental Mutation 'R6875:Prpsap1'

536391

Institutional Source

Beutler Lab

Gene Symbol

Prpsap1

Ensembl Gene

ENSMUSG00000015869

Gene Name

phosphoribosyl pyrophosphate synthetase-associated protein 1

Synonyms

5730409F23Rik, PAP39

MMRRC Submission

044971-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.108) question?

Stock #

R6875 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

116470845-116494202 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 116471438 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 373 (S373P)

Ref Sequence

ENSEMBL: ENSMUSP00000101999 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000106391]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000106391
AA Change: S373P

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000101999
Gene: ENSMUSG00000015869
AA Change: S373P

Domain	Start	End	E-Value	Type
low complexity region	5	34	N/A	INTRINSIC
Pfam:Pribosyltran_N	38	155	4.8e-41	PFAM
Pfam:Pribosyl_synth	196	379	1.1e-102	PFAM

Meta Mutation Damage Score

0.3875

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.2%

Validation Efficiency

98% (58/59)

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
6030458C11Rik	T	C	15: 12,812,068 (GRCm38)	H270R	probably damaging	Het
Abcb1a	T	C	5: 8,701,628 (GRCm38)	I336T	probably benign	Het
Adam19	T	A	11: 46,112,875 (GRCm38)	F177I	probably benign	Het
Ankrd53	T	C	6: 83,768,173 (GRCm38)	V455A	probably damaging	Het
Arrdc1	A	G	2: 24,925,665 (GRCm38)	S415P	probably benign	Het
Atp10a	T	C	7: 58,797,352 (GRCm38)	L614P	probably benign	Het
C130060K24Rik	A	T	6: 65,456,336 (GRCm38)	N380I	probably benign	Het
Catsper1	G	T	19: 5,343,963 (GRCm38)	V668F	probably damaging	Het
Cluh	T	A	11: 74,661,918 (GRCm38)	D596E	probably damaging	Het
Cnot10	A	G	9: 114,615,107 (GRCm38)	S407P	probably benign	Het
Commd6	T	C	14: 101,634,350 (GRCm38)	T86A	probably damaging	Het
D5Ertd579e	A	T	5: 36,604,657 (GRCm38)		probably null	Het
Eif3l	A	G	15: 79,085,560 (GRCm38)	D252G	probably damaging	Het
Epha2	A	T	4: 141,328,468 (GRCm38)	S962C	probably damaging	Het
Fcho1	C	A	8: 71,714,425 (GRCm38)		probably null	Het
Fgf23	G	T	6: 127,073,216 (GRCm38)	G63C	probably damaging	Het
Flnc	A	T	6: 29,445,749 (GRCm38)	Y834F	probably damaging	Het
Gcn1l1	T	C	5: 115,588,110 (GRCm38)	L608P	probably damaging	Het
Hdac5	T	A	11: 102,202,276 (GRCm38)	E545V	probably damaging	Het
Hecw2	A	T	1: 53,937,132 (GRCm38)	M166K	probably benign	Het
Ikbkb	T	C	8: 22,665,893 (GRCm38)	D586G	probably damaging	Het
Il1f9	G	C	2: 24,188,621 (GRCm38)		probably null	Het
Ipo13	A	T	4: 117,904,911 (GRCm38)	I422N	possibly damaging	Het
Iqgap3	GGAGAG	GGAG	3: 88,112,771 (GRCm38)		probably null	Het
Kat6a	G	A	8: 22,932,361 (GRCm38)	A896T	probably benign	Het
Kif28	A	G	1: 179,735,994 (GRCm38)	I139T	probably damaging	Het
Klhl25	A	G	7: 75,866,342 (GRCm38)	E332G	probably damaging	Het
Krt8	C	T	15: 101,997,908 (GRCm38)	A389T	probably benign	Het
Msrb3	T	C	10: 120,784,106 (GRCm38)	S175G	probably benign	Het
Muc5ac	C	T	7: 141,809,744 (GRCm38)		probably benign	Het
Myo10	T	C	15: 25,805,659 (GRCm38)	Y1709H	probably benign	Het
Nckap5	A	G	1: 126,023,194 (GRCm38)	S1519P	probably benign	Het
Npnt	T	A	3: 132,909,910 (GRCm38)	D124V	probably damaging	Het
Nr1d1	A	T	11: 98,770,836 (GRCm38)		probably null	Het
Ogdh	A	G	11: 6,340,477 (GRCm38)	Y365C	probably benign	Het
Olfr1305	A	T	2: 111,872,961 (GRCm38)	I298N	possibly damaging	Het
Phf21b	A	T	15: 84,787,446 (GRCm38)	C416S	probably damaging	Het
Rab28	T	C	5: 41,703,534 (GRCm38)	T26A	probably damaging	Het
Rbbp8nl	A	G	2: 180,279,226 (GRCm38)	I455T	probably benign	Het
Rnft2	G	A	5: 118,228,818 (GRCm38)	A285V	possibly damaging	Het
Rrp36	G	T	17: 46,672,371 (GRCm38)	Q106K	probably benign	Het
Rsf1	CG	CGACGGCGGAG	7: 97,579,908 (GRCm38)		probably benign	Het
Runx2	G	A	17: 44,814,192 (GRCm38)	P80L	probably damaging	Het
Scn5a	A	G	9: 119,486,644 (GRCm38)	L1666P	probably damaging	Het
Siglecf	A	C	7: 43,355,200 (GRCm38)	T318P	probably benign	Het
Slc22a1	C	T	17: 12,667,305 (GRCm38)	W147*	probably null	Het
Smchd1	T	C	17: 71,353,506 (GRCm38)	I1868V	probably damaging	Het
Snx21	A	G	2: 164,791,902 (GRCm38)	S203G	probably damaging	Het
Srl	T	C	16: 4,482,831 (GRCm38)	K792R	probably benign	Het
Srrt	A	G	5: 137,298,673 (GRCm38)	F100S	probably benign	Het
Stard9	G	T	2: 120,697,436 (GRCm38)	M1391I	probably benign	Het
Syne2	A	G	12: 76,035,630 (GRCm38)	E119G	probably damaging	Het
Syt11	G	T	3: 88,762,155 (GRCm38)	S143R	possibly damaging	Het
Tiparp	T	A	3: 65,531,642 (GRCm38)	H126Q	probably benign	Het
Tulp2	C	A	7: 45,518,614 (GRCm38)	T150K	probably benign	Het
Ugt2b37	T	A	5: 87,242,429 (GRCm38)	Y386F	probably benign	Het
Usp31	C	T	7: 121,649,640 (GRCm38)	W860*	probably null	Het
Zfp317	A	G	9: 19,643,665 (GRCm38)	R30G	probably damaging	Het
Zfp709	C	A	8: 71,889,007 (GRCm38)	N93K	possibly damaging	Het

Other mutations in Prpsap1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0042:Prpsap1	UTSW	11	116,479,656 (GRCm38)	missense	probably benign	0.42
R0684:Prpsap1	UTSW	11	116,471,491 (GRCm38)	missense	probably damaging	1.00
R1538:Prpsap1	UTSW	11	116,479,708 (GRCm38)	missense	probably benign	0.09
R2429:Prpsap1	UTSW	11	116,472,235 (GRCm38)	missense	probably damaging	1.00
R3415:Prpsap1	UTSW	11	116,478,584 (GRCm38)	missense	probably benign	0.01
R3417:Prpsap1	UTSW	11	116,478,584 (GRCm38)	missense	probably benign	0.01
R4035:Prpsap1	UTSW	11	116,473,008 (GRCm38)	missense	probably benign	0.17
R5223:Prpsap1	UTSW	11	116,488,148 (GRCm38)	missense	probably benign	0.09
R6216:Prpsap1	UTSW	11	116,471,413 (GRCm38)	missense	probably damaging	1.00
R7086:Prpsap1	UTSW	11	116,477,283 (GRCm38)	missense	probably benign
R7159:Prpsap1	UTSW	11	116,494,044 (GRCm38)	missense	probably benign	0.26
R7999:Prpsap1	UTSW	11	116,490,216 (GRCm38)	start codon destroyed	probably null
R8414:Prpsap1	UTSW	11	116,478,613 (GRCm38)	missense	probably damaging	1.00
R8940:Prpsap1	UTSW	11	116,479,789 (GRCm38)	missense	probably damaging	0.98
R9364:Prpsap1	UTSW	11	116,494,189 (GRCm38)	start gained	probably benign
Z1176:Prpsap1	UTSW	11	116,479,768 (GRCm38)	missense	possibly damaging	0.89
Z1176:Prpsap1	UTSW	11	116,478,618 (GRCm38)	missense	possibly damaging	0.49

Predicted Primers

PCR Primer
(F):5'- TACTGGAAGGTGTTACCAGCC -3'
(R):5'- TCCTGGCTCACCTGCATAAC -3'

Sequencing Primer
(F):5'- GGTGTTACCAGCCTACAACTG -3'
(R):5'- GGCTCACCTGCATAACTTTGTAC -3'

Posted On

2018-10-18