Incidental Mutation 'R6887:Adgrl4'
ID |
536985 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Adgrl4
|
Ensembl Gene |
ENSMUSG00000039167 |
Gene Name |
adhesion G protein-coupled receptor L4 |
Synonyms |
EGF-TM7 receptor, Eltd1, 1110033N21Rik, Etl |
MMRRC Submission |
044981-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R6887 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
3 |
Chromosomal Location |
151143519-151250718 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 151248370 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Phenylalanine
at position 681
(I681F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000041939
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000046977]
|
AlphaFold |
Q923X1 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000046977
AA Change: I681F
PolyPhen 2
Score 0.458 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000041939 Gene: ENSMUSG00000039167 AA Change: I681F
Domain | Start | End | E-Value | Type |
EGF
|
21 |
57 |
9.13e0 |
SMART |
EGF_CA
|
58 |
107 |
4.88e-9 |
SMART |
EGF_CA
|
108 |
157 |
4.88e-9 |
SMART |
Pfam:GAIN
|
182 |
390 |
6.8e-38 |
PFAM |
GPS
|
414 |
467 |
1.25e-17 |
SMART |
Pfam:7tm_2
|
473 |
709 |
2.5e-58 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.4%
- 20x: 98.1%
|
Validation Efficiency |
100% (39/39) |
MGI Phenotype |
PHENOTYPE: For a targeted mutation, no significant differences were detected between homozygous mice and controls in a high-throughput screen. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 39 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acan |
G |
A |
7: 78,742,231 (GRCm39) |
V543I |
probably damaging |
Het |
Adcy5 |
A |
G |
16: 35,118,960 (GRCm39) |
I1104V |
possibly damaging |
Het |
Adgrv1 |
T |
A |
13: 81,676,820 (GRCm39) |
M2004L |
probably benign |
Het |
Anapc1 |
A |
G |
2: 128,501,688 (GRCm39) |
S785P |
possibly damaging |
Het |
Ap3d1 |
A |
T |
10: 80,559,532 (GRCm39) |
I242N |
probably damaging |
Het |
Arhgap5 |
T |
C |
12: 52,565,927 (GRCm39) |
L966P |
probably benign |
Het |
Atp8a1 |
T |
C |
5: 67,895,794 (GRCm39) |
T547A |
probably benign |
Het |
Cadps |
A |
G |
14: 12,505,811 (GRCm38) |
F753S |
probably damaging |
Het |
Cdc20b |
T |
C |
13: 113,215,187 (GRCm39) |
S252P |
possibly damaging |
Het |
Cep63 |
A |
G |
9: 102,503,126 (GRCm39) |
|
probably benign |
Het |
Chrna5 |
G |
T |
9: 54,912,417 (GRCm39) |
V302L |
probably benign |
Het |
Crtc2 |
A |
G |
3: 90,168,378 (GRCm39) |
T374A |
probably damaging |
Het |
Dmtf1 |
T |
G |
5: 9,187,149 (GRCm39) |
D140A |
probably damaging |
Het |
Exosc8 |
C |
T |
3: 54,641,120 (GRCm39) |
V39M |
probably damaging |
Het |
Fam135b |
A |
C |
15: 71,335,164 (GRCm39) |
S677A |
probably damaging |
Het |
Hif1an |
T |
C |
19: 44,551,828 (GRCm39) |
Y93H |
probably damaging |
Het |
Hrc |
T |
C |
7: 44,985,088 (GRCm39) |
F80L |
probably benign |
Het |
Jmjd1c |
A |
G |
10: 67,025,599 (GRCm39) |
T139A |
possibly damaging |
Het |
Kdr |
T |
G |
5: 76,129,111 (GRCm39) |
R178S |
probably benign |
Het |
Lrrc61 |
A |
C |
6: 48,545,366 (GRCm39) |
N63T |
probably damaging |
Het |
Mrc1 |
C |
T |
2: 14,330,048 (GRCm39) |
A1219V |
possibly damaging |
Het |
Neto1 |
T |
C |
18: 86,516,760 (GRCm39) |
V359A |
probably benign |
Het |
Ngly1 |
T |
C |
14: 16,281,836 (GRCm38) |
I364T |
probably benign |
Het |
Nisch |
C |
T |
14: 30,907,301 (GRCm39) |
|
probably benign |
Het |
Or2y8 |
C |
A |
11: 52,036,179 (GRCm39) |
M59I |
probably benign |
Het |
Prrc2a |
T |
C |
17: 35,374,651 (GRCm39) |
D1333G |
probably damaging |
Het |
Raly |
G |
T |
2: 154,703,830 (GRCm39) |
V134F |
probably damaging |
Het |
Rbm6 |
T |
C |
9: 107,729,430 (GRCm39) |
Y406C |
probably damaging |
Het |
Robo4 |
G |
C |
9: 37,313,363 (GRCm39) |
E6Q |
possibly damaging |
Het |
Scnn1g |
C |
A |
7: 121,359,667 (GRCm39) |
S383R |
probably benign |
Het |
Sgtb |
T |
C |
13: 104,247,659 (GRCm39) |
W13R |
probably benign |
Het |
Slit3 |
T |
C |
11: 35,435,633 (GRCm39) |
|
probably null |
Het |
Tbc1d32 |
G |
A |
10: 56,027,907 (GRCm39) |
Q732* |
probably null |
Het |
Tek |
T |
A |
4: 94,693,181 (GRCm39) |
C247S |
probably damaging |
Het |
Tmf1 |
A |
T |
6: 97,153,799 (GRCm39) |
D91E |
probably damaging |
Het |
Usp39 |
A |
G |
6: 72,310,140 (GRCm39) |
L326P |
probably damaging |
Het |
Vmn2r7 |
A |
T |
3: 64,598,248 (GRCm39) |
C770S |
probably damaging |
Het |
Wdr31 |
C |
T |
4: 62,375,802 (GRCm39) |
G58R |
probably benign |
Het |
Zfyve26 |
A |
G |
12: 79,313,223 (GRCm39) |
I54T |
probably damaging |
Het |
|
Other mutations in Adgrl4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00488:Adgrl4
|
APN |
3 |
151,248,478 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00694:Adgrl4
|
APN |
3 |
151,145,033 (GRCm39) |
splice site |
probably benign |
|
IGL01143:Adgrl4
|
APN |
3 |
151,205,866 (GRCm39) |
splice site |
probably null |
|
IGL01359:Adgrl4
|
APN |
3 |
151,248,923 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01947:Adgrl4
|
APN |
3 |
151,216,428 (GRCm39) |
critical splice donor site |
probably null |
|
IGL02149:Adgrl4
|
APN |
3 |
151,205,991 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL02324:Adgrl4
|
APN |
3 |
151,203,511 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02562:Adgrl4
|
APN |
3 |
151,144,949 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02644:Adgrl4
|
APN |
3 |
151,198,007 (GRCm39) |
missense |
probably benign |
0.00 |
trivial
|
UTSW |
3 |
151,223,247 (GRCm39) |
missense |
probably benign |
0.07 |
R0077:Adgrl4
|
UTSW |
3 |
151,223,418 (GRCm39) |
missense |
probably damaging |
1.00 |
R0116:Adgrl4
|
UTSW |
3 |
151,223,247 (GRCm39) |
missense |
probably benign |
0.07 |
R0331:Adgrl4
|
UTSW |
3 |
151,203,577 (GRCm39) |
missense |
probably benign |
0.00 |
R0601:Adgrl4
|
UTSW |
3 |
151,204,066 (GRCm39) |
splice site |
probably benign |
|
R0613:Adgrl4
|
UTSW |
3 |
151,248,859 (GRCm39) |
splice site |
probably benign |
|
R1293:Adgrl4
|
UTSW |
3 |
151,213,081 (GRCm39) |
missense |
probably benign |
0.00 |
R1463:Adgrl4
|
UTSW |
3 |
151,216,233 (GRCm39) |
missense |
probably damaging |
0.98 |
R1697:Adgrl4
|
UTSW |
3 |
151,223,248 (GRCm39) |
missense |
probably damaging |
1.00 |
R1731:Adgrl4
|
UTSW |
3 |
151,246,623 (GRCm39) |
missense |
possibly damaging |
0.64 |
R1765:Adgrl4
|
UTSW |
3 |
151,248,872 (GRCm39) |
missense |
probably damaging |
1.00 |
R1782:Adgrl4
|
UTSW |
3 |
151,248,442 (GRCm39) |
nonsense |
probably null |
|
R1888:Adgrl4
|
UTSW |
3 |
151,144,914 (GRCm39) |
missense |
probably benign |
0.11 |
R1888:Adgrl4
|
UTSW |
3 |
151,144,914 (GRCm39) |
missense |
probably benign |
0.11 |
R1957:Adgrl4
|
UTSW |
3 |
151,216,416 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2128:Adgrl4
|
UTSW |
3 |
151,205,838 (GRCm39) |
missense |
probably benign |
0.00 |
R2180:Adgrl4
|
UTSW |
3 |
151,205,779 (GRCm39) |
missense |
probably damaging |
0.96 |
R2238:Adgrl4
|
UTSW |
3 |
151,205,779 (GRCm39) |
missense |
probably damaging |
0.96 |
R2474:Adgrl4
|
UTSW |
3 |
151,248,361 (GRCm39) |
missense |
probably benign |
0.01 |
R2697:Adgrl4
|
UTSW |
3 |
151,216,260 (GRCm39) |
missense |
probably damaging |
1.00 |
R3835:Adgrl4
|
UTSW |
3 |
151,216,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R4499:Adgrl4
|
UTSW |
3 |
151,216,422 (GRCm39) |
missense |
possibly damaging |
0.81 |
R4640:Adgrl4
|
UTSW |
3 |
151,205,947 (GRCm39) |
unclassified |
probably benign |
|
R4747:Adgrl4
|
UTSW |
3 |
151,213,077 (GRCm39) |
missense |
probably benign |
0.01 |
R5428:Adgrl4
|
UTSW |
3 |
151,248,323 (GRCm39) |
missense |
probably damaging |
1.00 |
R5510:Adgrl4
|
UTSW |
3 |
151,203,467 (GRCm39) |
missense |
possibly damaging |
0.89 |
R5717:Adgrl4
|
UTSW |
3 |
151,197,971 (GRCm39) |
missense |
probably benign |
0.01 |
R6106:Adgrl4
|
UTSW |
3 |
151,246,622 (GRCm39) |
missense |
possibly damaging |
0.67 |
R6343:Adgrl4
|
UTSW |
3 |
151,223,443 (GRCm39) |
missense |
probably damaging |
1.00 |
R6419:Adgrl4
|
UTSW |
3 |
151,144,953 (GRCm39) |
missense |
probably damaging |
1.00 |
R6468:Adgrl4
|
UTSW |
3 |
151,198,012 (GRCm39) |
missense |
probably benign |
|
R6636:Adgrl4
|
UTSW |
3 |
151,223,410 (GRCm39) |
nonsense |
probably null |
|
R6637:Adgrl4
|
UTSW |
3 |
151,223,410 (GRCm39) |
nonsense |
probably null |
|
R6687:Adgrl4
|
UTSW |
3 |
151,248,392 (GRCm39) |
missense |
probably benign |
0.00 |
R6856:Adgrl4
|
UTSW |
3 |
151,205,755 (GRCm39) |
missense |
probably benign |
0.00 |
R7041:Adgrl4
|
UTSW |
3 |
151,144,959 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Adgrl4
|
UTSW |
3 |
151,144,887 (GRCm39) |
missense |
probably benign |
0.08 |
R7597:Adgrl4
|
UTSW |
3 |
151,248,895 (GRCm39) |
missense |
probably damaging |
1.00 |
R7751:Adgrl4
|
UTSW |
3 |
151,197,946 (GRCm39) |
missense |
probably damaging |
0.99 |
R8556:Adgrl4
|
UTSW |
3 |
151,216,302 (GRCm39) |
missense |
probably damaging |
0.98 |
R8696:Adgrl4
|
UTSW |
3 |
151,248,344 (GRCm39) |
missense |
probably damaging |
1.00 |
R8698:Adgrl4
|
UTSW |
3 |
151,203,512 (GRCm39) |
missense |
probably damaging |
1.00 |
R8795:Adgrl4
|
UTSW |
3 |
151,216,416 (GRCm39) |
missense |
probably benign |
0.03 |
R9226:Adgrl4
|
UTSW |
3 |
151,198,064 (GRCm39) |
critical splice donor site |
probably null |
|
R9655:Adgrl4
|
UTSW |
3 |
151,248,450 (GRCm39) |
missense |
probably damaging |
0.96 |
R9755:Adgrl4
|
UTSW |
3 |
151,216,418 (GRCm39) |
missense |
probably benign |
0.01 |
R9767:Adgrl4
|
UTSW |
3 |
151,207,394 (GRCm39) |
missense |
probably benign |
0.16 |
R9784:Adgrl4
|
UTSW |
3 |
151,214,948 (GRCm39) |
missense |
probably damaging |
1.00 |
X0053:Adgrl4
|
UTSW |
3 |
151,203,470 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1088:Adgrl4
|
UTSW |
3 |
151,205,812 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGTTGCATCAAACCACAAGC -3'
(R):5'- GTCACACTTCAAGGCAACAG -3'
Sequencing Primer
(F):5'- CCACAAGCCAGCTATGAGC -3'
(R):5'- GTCACACTTCAAGGCAACAGTTTTTC -3'
|
Posted On |
2018-10-18 |