Mutagenetix > Incidental Mutation

Incidental Mutation 'R6815:Prr15l'

537291

Institutional Source

Beutler Lab

Gene Symbol

Prr15l

Ensembl Gene

ENSMUSG00000047040

Gene Name

proline rich 15-like

Synonyms

Atad4, E230006A12Rik

MMRRC Submission

044927-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

R6815 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

96816987-96826474 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 96825433 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 21 (V21A)

Ref Sequence

ENSEMBL: ENSMUSP00000103262 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000018803] [ENSMUST00000054311] [ENSMUST00000062172] [ENSMUST00000107629] [ENSMUST00000107633] [ENSMUST00000107636]

AlphaFold

Q8JZM2

Predicted Effect

probably benign
Transcript: ENSMUST00000018803

SMART Domains

Protein: ENSMUSP00000018803
Gene: ENSMUSG00000018659

Domain	Start	End	E-Value	Type
Pfam:Pyridox_oxase_2	59	149	3.9e-8	PFAM
Pfam:Pyridox_oxidase	60	153	2.4e-27	PFAM
Pfam:PNPOx_C	206	261	2.8e-19	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000054311
AA Change: V21A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000056614
Gene: ENSMUSG00000047040
AA Change: V21A

Domain	Start	End	E-Value	Type
Pfam:ATAD4	6	88	3.7e-33	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000062172
AA Change: V21A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000056647
Gene: ENSMUSG00000047040
AA Change: V21A

Domain	Start	End	E-Value	Type
Pfam:ATAD4	6	87	1.3e-26	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000107629

SMART Domains

Protein: ENSMUSP00000103255
Gene: ENSMUSG00000018659

Domain	Start	End	E-Value	Type
PDB:1NRG\|A	1	92	2e-49	PDB
SCOP:d1dnla_	57	86	3e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000107633
AA Change: V21A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000103259
Gene: ENSMUSG00000047040
AA Change: V21A

Domain	Start	End	E-Value	Type
Pfam:ATAD4	6	88	3.7e-33	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000107636
AA Change: V21A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000103262
Gene: ENSMUSG00000047040
AA Change: V21A

Domain	Start	End	E-Value	Type
Pfam:ATAD4	6	88	3.7e-33	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931414P19Rik	T	G	14: 54,828,610 (GRCm39)	N297T	probably damaging	Het
6820408C15Rik	A	G	2: 152,282,975 (GRCm39)	N251S	probably benign	Het
Abcc5	T	C	16: 20,152,380 (GRCm39)	T1389A	probably damaging	Het
Acad11	A	G	9: 103,958,526 (GRCm39)	T265A	probably benign	Het
Ace3	C	T	11: 105,888,084 (GRCm39)	Q302*	probably null	Het
Aip	A	T	19: 4,166,066 (GRCm39)	H128Q	probably benign	Het
Akr1b7	A	T	6: 34,389,269 (GRCm39)		probably null	Het
Arid4a	T	A	12: 71,063,856 (GRCm39)		probably null	Het
Armh1	T	A	4: 117,087,134 (GRCm39)	H177L	probably damaging	Het
Aspm	A	G	1: 139,407,880 (GRCm39)	T2256A	probably benign	Het
Bco1	A	T	8: 117,840,261 (GRCm39)	M260L	probably benign	Het
Ccdc110	A	G	8: 46,395,024 (GRCm39)	N305S	probably benign	Het
Ccdc158	T	A	5: 92,760,345 (GRCm39)	Y1035F	probably damaging	Het
Cd180	C	T	13: 102,841,937 (GRCm39)	L328F	probably damaging	Het
Cntrl	T	C	2: 35,039,503 (GRCm39)	L1121P	probably damaging	Het
Cyp2u1	A	C	3: 131,091,659 (GRCm39)	I287S	probably damaging	Het
Dnah3	C	T	7: 119,570,950 (GRCm39)	M2195I	probably benign	Het
Dnajc21	C	T	15: 10,447,777 (GRCm39)		probably null	Het
Dock10	C	T	1: 80,516,576 (GRCm39)	V1398M	possibly damaging	Het
Dpy19l3	T	A	7: 35,449,272 (GRCm39)	I44F	possibly damaging	Het
Dst	C	A	1: 34,267,450 (GRCm39)	T4964K	possibly damaging	Het
Ercc4	T	C	16: 12,941,299 (GRCm39)	I139T	probably damaging	Het
Gpr4	T	A	7: 18,956,560 (GRCm39)	F161I	probably damaging	Het
Gucy2e	A	C	11: 69,122,827 (GRCm39)	L516R	possibly damaging	Het
Hdhd5	A	G	6: 120,498,170 (GRCm39)	V143A	probably benign	Het
Heatr4	T	A	12: 84,026,501 (GRCm39)	Q252L	probably damaging	Het
Heatr5a	T	G	12: 52,002,291 (GRCm39)	D215A	possibly damaging	Het
Hipk2	G	T	6: 38,795,777 (GRCm39)	A164D	probably damaging	Het
Igsf11	A	G	16: 38,829,243 (GRCm39)	I46V	probably benign	Het
Iqgap1	C	T	7: 80,416,632 (GRCm39)		probably null	Het
Lrig1	A	G	6: 94,602,010 (GRCm39)	L281P	probably damaging	Het
Or10p22	A	G	10: 128,826,191 (GRCm39)	S137G	probably benign	Het
Or7g32	G	T	9: 19,389,061 (GRCm39)	H159N	probably benign	Het
Pcdha7	A	G	18: 37,108,174 (GRCm39)	T400A	probably damaging	Het
Pde5a	A	G	3: 122,618,573 (GRCm39)	T629A	probably benign	Het
Pkhd1l1	A	G	15: 44,426,051 (GRCm39)	D3204G	probably damaging	Het
Prkd2	T	C	7: 16,577,718 (GRCm39)	F57S	probably benign	Het
Rag2	T	A	2: 101,460,900 (GRCm39)	N403K	probably damaging	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,229,111 (GRCm39)		probably benign	Het
Rtl1	C	A	12: 109,560,937 (GRCm39)	D301Y	probably damaging	Het
Septin14	T	C	5: 129,770,051 (GRCm39)	N215S	probably benign	Het
Sin3a	T	A	9: 57,024,824 (GRCm39)	D1061E	probably benign	Het
Skint5	T	A	4: 113,574,324 (GRCm39)		probably null	Het
Stox2	A	T	8: 47,646,136 (GRCm39)	D441E	probably damaging	Het
Tmem52b	G	A	6: 129,493,705 (GRCm39)		probably null	Het
Tpm3-rs7	A	G	14: 113,552,292 (GRCm39)	E62G	probably benign	Het
Trim54	G	T	5: 31,291,424 (GRCm39)	V182L	probably damaging	Het
Trmt6	A	C	2: 132,651,778 (GRCm39)	V214G	probably damaging	Het
Ttc21b	T	C	2: 66,057,134 (GRCm39)	S613G	probably benign	Het
Ttll4	C	A	1: 74,718,508 (GRCm39)	R120S	possibly damaging	Het
Wdr41	A	T	13: 95,154,682 (GRCm39)	K354N	probably damaging	Het
Zfp652	A	T	11: 95,640,230 (GRCm39)	K52*	probably null	Het

Other mutations in Prr15l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0389:Prr15l	UTSW	11	96,825,440 (GRCm39)	nonsense	probably null
R4933:Prr15l	UTSW	11	96,825,588 (GRCm39)	missense	probably damaging	1.00
R7776:Prr15l	UTSW	11	96,825,390 (GRCm39)	missense	possibly damaging	0.48
R9336:Prr15l	UTSW	11	96,825,599 (GRCm39)	missense	probably damaging	1.00
R9626:Prr15l	UTSW	11	96,825,440 (GRCm39)	nonsense	probably null
Z1176:Prr15l	UTSW	11	96,825,589 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TAGGGTTGTCTCACTGTCCC -3'
(R):5'- CTTTGAAGCGGCCTGAGTTG -3'

Sequencing Primer
(F):5'- TGTAGACAGGCCCTCACTATGTAG -3'
(R):5'- GGAGACCTTGACATGCTTGC -3'

Posted On

2018-10-18