Mutagenetix > Incidental Mutation

Incidental Mutation 'R6815:Tpm3-rs7'

537300

Institutional Source

Beutler Lab

Gene Symbol

Tpm3-rs7

Ensembl Gene

ENSMUSG00000058126

Gene Name

tropomyosin 3, related sequence 7

Synonyms

MMRRC Submission

044927-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.273) question?

Stock #

R6815 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

113552033-113554152 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 113552292 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 62 (E62G)

Ref Sequence

ENSEMBL: ENSMUSP00000072197 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000072359]

AlphaFold

D3Z2H9

Predicted Effect

probably benign
Transcript: ENSMUST00000072359
AA Change: E62G

PolyPhen 2 Score 0.088 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000072197
Gene: ENSMUSG00000058126
AA Change: E62G

Domain	Start	End	E-Value	Type
Pfam:Tropomyosin_1	3	117	7e-22	PFAM
Pfam:Tropomyosin	12	248	5e-90	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931414P19Rik	T	G	14: 54,828,610 (GRCm39)	N297T	probably damaging	Het
6820408C15Rik	A	G	2: 152,282,975 (GRCm39)	N251S	probably benign	Het
Abcc5	T	C	16: 20,152,380 (GRCm39)	T1389A	probably damaging	Het
Acad11	A	G	9: 103,958,526 (GRCm39)	T265A	probably benign	Het
Ace3	C	T	11: 105,888,084 (GRCm39)	Q302*	probably null	Het
Aip	A	T	19: 4,166,066 (GRCm39)	H128Q	probably benign	Het
Akr1b7	A	T	6: 34,389,269 (GRCm39)		probably null	Het
Arid4a	T	A	12: 71,063,856 (GRCm39)		probably null	Het
Armh1	T	A	4: 117,087,134 (GRCm39)	H177L	probably damaging	Het
Aspm	A	G	1: 139,407,880 (GRCm39)	T2256A	probably benign	Het
Bco1	A	T	8: 117,840,261 (GRCm39)	M260L	probably benign	Het
Ccdc110	A	G	8: 46,395,024 (GRCm39)	N305S	probably benign	Het
Ccdc158	T	A	5: 92,760,345 (GRCm39)	Y1035F	probably damaging	Het
Cd180	C	T	13: 102,841,937 (GRCm39)	L328F	probably damaging	Het
Cntrl	T	C	2: 35,039,503 (GRCm39)	L1121P	probably damaging	Het
Cyp2u1	A	C	3: 131,091,659 (GRCm39)	I287S	probably damaging	Het
Dnah3	C	T	7: 119,570,950 (GRCm39)	M2195I	probably benign	Het
Dnajc21	C	T	15: 10,447,777 (GRCm39)		probably null	Het
Dock10	C	T	1: 80,516,576 (GRCm39)	V1398M	possibly damaging	Het
Dpy19l3	T	A	7: 35,449,272 (GRCm39)	I44F	possibly damaging	Het
Dst	C	A	1: 34,267,450 (GRCm39)	T4964K	possibly damaging	Het
Ercc4	T	C	16: 12,941,299 (GRCm39)	I139T	probably damaging	Het
Gpr4	T	A	7: 18,956,560 (GRCm39)	F161I	probably damaging	Het
Gucy2e	A	C	11: 69,122,827 (GRCm39)	L516R	possibly damaging	Het
Hdhd5	A	G	6: 120,498,170 (GRCm39)	V143A	probably benign	Het
Heatr4	T	A	12: 84,026,501 (GRCm39)	Q252L	probably damaging	Het
Heatr5a	T	G	12: 52,002,291 (GRCm39)	D215A	possibly damaging	Het
Hipk2	G	T	6: 38,795,777 (GRCm39)	A164D	probably damaging	Het
Igsf11	A	G	16: 38,829,243 (GRCm39)	I46V	probably benign	Het
Iqgap1	C	T	7: 80,416,632 (GRCm39)		probably null	Het
Lrig1	A	G	6: 94,602,010 (GRCm39)	L281P	probably damaging	Het
Or10p22	A	G	10: 128,826,191 (GRCm39)	S137G	probably benign	Het
Or7g32	G	T	9: 19,389,061 (GRCm39)	H159N	probably benign	Het
Pcdha7	A	G	18: 37,108,174 (GRCm39)	T400A	probably damaging	Het
Pde5a	A	G	3: 122,618,573 (GRCm39)	T629A	probably benign	Het
Pkhd1l1	A	G	15: 44,426,051 (GRCm39)	D3204G	probably damaging	Het
Prkd2	T	C	7: 16,577,718 (GRCm39)	F57S	probably benign	Het
Prr15l	T	C	11: 96,825,433 (GRCm39)	V21A	probably damaging	Het
Rag2	T	A	2: 101,460,900 (GRCm39)	N403K	probably damaging	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,229,111 (GRCm39)		probably benign	Het
Rtl1	C	A	12: 109,560,937 (GRCm39)	D301Y	probably damaging	Het
Septin14	T	C	5: 129,770,051 (GRCm39)	N215S	probably benign	Het
Sin3a	T	A	9: 57,024,824 (GRCm39)	D1061E	probably benign	Het
Skint5	T	A	4: 113,574,324 (GRCm39)		probably null	Het
Stox2	A	T	8: 47,646,136 (GRCm39)	D441E	probably damaging	Het
Tmem52b	G	A	6: 129,493,705 (GRCm39)		probably null	Het
Trim54	G	T	5: 31,291,424 (GRCm39)	V182L	probably damaging	Het
Trmt6	A	C	2: 132,651,778 (GRCm39)	V214G	probably damaging	Het
Ttc21b	T	C	2: 66,057,134 (GRCm39)	S613G	probably benign	Het
Ttll4	C	A	1: 74,718,508 (GRCm39)	R120S	possibly damaging	Het
Wdr41	A	T	13: 95,154,682 (GRCm39)	K354N	probably damaging	Het
Zfp652	A	T	11: 95,640,230 (GRCm39)	K52*	probably null	Het

Other mutations in Tpm3-rs7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02568:Tpm3-rs7	APN	14	113,552,370 (GRCm39)	missense	probably damaging	1.00
IGL02966:Tpm3-rs7	APN	14	113,552,810 (GRCm39)	nonsense	probably null
R1414:Tpm3-rs7	UTSW	14	113,552,274 (GRCm39)	missense	possibly damaging	0.61
R1789:Tpm3-rs7	UTSW	14	113,552,379 (GRCm39)	missense	probably damaging	0.99
R1823:Tpm3-rs7	UTSW	14	113,552,595 (GRCm39)	missense	possibly damaging	0.89
R5770:Tpm3-rs7	UTSW	14	113,552,807 (GRCm39)	missense	probably benign	0.00
R6612:Tpm3-rs7	UTSW	14	113,552,268 (GRCm39)	missense	probably benign	0.01
R6818:Tpm3-rs7	UTSW	14	113,552,448 (GRCm39)	missense	possibly damaging	0.91
R8109:Tpm3-rs7	UTSW	14	113,552,772 (GRCm39)	missense	probably benign	0.00
R8921:Tpm3-rs7	UTSW	14	113,552,493 (GRCm39)	missense	probably benign	0.42
R8985:Tpm3-rs7	UTSW	14	113,552,756 (GRCm39)	missense	probably benign	0.44
R9386:Tpm3-rs7	UTSW	14	113,552,597 (GRCm39)	missense	probably benign	0.00
Z1176:Tpm3-rs7	UTSW	14	113,552,109 (GRCm39)	start codon destroyed	probably null	0.62

Predicted Primers

PCR Primer
(F):5'- TAGGAACCTGATTTCCAGAAGC -3'
(R):5'- TCGGCCTCTTCTGCAATGTG -3'

Sequencing Primer
(F):5'- ATTTCCAGAAGCAGCTTGTAGGC -3'
(R):5'- GCAATGTGCTTTGCTTCCTTTAG -3'

Posted On

2018-10-18