Incidental Mutation 'R6821:Atp8b2'
ID 537609
Institutional Source Beutler Lab
Gene Symbol Atp8b2
Ensembl Gene ENSMUSG00000060671
Gene Name ATPase, class I, type 8B, member 2
Synonyms Id
MMRRC Submission 044933-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.209) question?
Stock # R6821 (G1)
Quality Score 225.009
Status Validated
Chromosome 3
Chromosomal Location 89846795-89870645 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 89855480 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 506 (F506I)
Ref Sequence ENSEMBL: ENSMUSP00000128423 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000069805] [ENSMUST00000107396] [ENSMUST00000166502] [ENSMUST00000168276] [ENSMUST00000170739]
AlphaFold P98199
Predicted Effect possibly damaging
Transcript: ENSMUST00000069805
AA Change: F525I

PolyPhen 2 Score 0.901 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000063384
Gene: ENSMUSG00000060671
AA Change: F525I

DomainStartEndE-ValueType
low complexity region 30 44 N/A INTRINSIC
low complexity region 80 96 N/A INTRINSIC
Pfam:E1-E2_ATPase 103 374 5.6e-18 PFAM
Pfam:HAD 408 842 1.3e-17 PFAM
Pfam:Hydrolase_like2 491 590 1e-11 PFAM
Pfam:Hydrolase 590 845 7.9e-8 PFAM
low complexity region 1133 1147 N/A INTRINSIC
low complexity region 1167 1190 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000107396
AA Change: F506I

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000103019
Gene: ENSMUSG00000060671
AA Change: F506I

DomainStartEndE-ValueType
Pfam:PhoLip_ATPase_N 15 81 1.3e-29 PFAM
Pfam:E1-E2_ATPase 81 351 2.7e-9 PFAM
Pfam:HAD 389 847 1.5e-17 PFAM
Pfam:Cation_ATPase 472 571 4.3e-12 PFAM
Pfam:PhoLip_ATPase_C 864 1118 2e-84 PFAM
low complexity region 1138 1152 N/A INTRINSIC
low complexity region 1172 1195 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000166502
SMART Domains Protein: ENSMUSP00000132201
Gene: ENSMUSG00000060671

DomainStartEndE-ValueType
SCOP:d1eula_ 2 95 5e-7 SMART
low complexity region 100 109 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000168276
AA Change: F506I

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000128423
Gene: ENSMUSG00000060671
AA Change: F506I

DomainStartEndE-ValueType
low complexity region 8 25 N/A INTRINSIC
low complexity region 61 77 N/A INTRINSIC
Pfam:E1-E2_ATPase 84 355 2.5e-18 PFAM
Pfam:HAD 389 823 7.9e-18 PFAM
Pfam:Hydrolase_like2 472 571 3.6e-12 PFAM
Pfam:Hydrolase 571 826 6.5e-8 PFAM
low complexity region 1114 1128 N/A INTRINSIC
low complexity region 1148 1171 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000170739
AA Change: F27I

PolyPhen 2 Score 0.959 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000127720
Gene: ENSMUSG00000060671
AA Change: F27I

DomainStartEndE-ValueType
Pfam:Hydrolase_like2 1 82 1.4e-7 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000171941
SMART Domains Protein: ENSMUSP00000130545
Gene: ENSMUSG00000060671

DomainStartEndE-ValueType
Pfam:HAD 2 158 3.3e-8 PFAM
Pfam:Hydrolase_3 124 167 1.7e-6 PFAM
Meta Mutation Damage Score 0.2703 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.7%
Validation Efficiency 97% (63/65)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene belongs to the family of P-type cation transport ATPases, and to the subfamily of aminophospholipid-transporting ATPases. The aminophospholipid translocases transport phosphatidylserine and phosphatidylethanolamine from one side of a bilayer to another. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acsl5 T C 19: 55,277,268 (GRCm39) I417T probably benign Het
Adamts12 A C 15: 11,152,134 (GRCm39) K208T probably benign Het
Adamts8 T A 9: 30,867,922 (GRCm39) L582Q probably benign Het
Aim2 C G 1: 173,291,546 (GRCm39) T317R probably damaging Het
Ano9 A T 7: 140,687,169 (GRCm39) F357I possibly damaging Het
Aox3 T C 1: 58,189,547 (GRCm39) V416A probably benign Het
Arhgap21 A C 2: 20,853,659 (GRCm39) F1901C probably benign Het
Atp9b A T 18: 80,890,463 (GRCm39) L292H probably damaging Het
C2cd5 A G 6: 142,963,712 (GRCm39) V891A probably damaging Het
Ccnt2 T C 1: 127,731,072 (GRCm39) S650P probably damaging Het
Cdhr3 T A 12: 33,085,044 (GRCm39) N791Y probably damaging Het
Cmtm1 TCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGG TCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGG 8: 105,036,334 (GRCm39) probably null Het
D630003M21Rik A C 2: 158,046,694 (GRCm39) L761R probably damaging Het
Draxin G T 4: 148,200,148 (GRCm39) Q101K possibly damaging Het
Dtx3l A T 16: 35,753,430 (GRCm39) L392Q probably damaging Het
Eif3d A G 15: 77,845,855 (GRCm39) S389P possibly damaging Het
Enpp5 G A 17: 44,396,155 (GRCm39) G356S probably damaging Het
Epha4 T C 1: 77,359,582 (GRCm39) N757S possibly damaging Het
Fam228b T C 12: 4,813,083 (GRCm39) I96V probably benign Het
Gars1 A G 6: 55,056,323 (GRCm39) E728G probably benign Het
Gldn T C 9: 54,246,054 (GRCm39) M535T probably benign Het
Gm47985 A G 1: 151,058,787 (GRCm39) T143A possibly damaging Het
Gpr6 T C 10: 40,947,004 (GRCm39) T193A probably benign Het
Grik5 C T 7: 24,745,780 (GRCm39) R431Q possibly damaging Het
Hecw1 T A 13: 14,438,719 (GRCm39) Y1315F probably damaging Het
Hs3st2 A G 7: 121,099,745 (GRCm39) D197G possibly damaging Het
Igsf9 T C 1: 172,312,060 (GRCm39) I2T probably benign Het
Ints9 A G 14: 65,274,907 (GRCm39) E621G probably benign Het
Itm2b G A 14: 73,603,907 (GRCm39) P47S probably benign Het
Map10 A G 8: 126,397,138 (GRCm39) K177R probably benign Het
Mdh2 T C 5: 135,818,525 (GRCm39) F260S possibly damaging Het
Mtmr11 A G 3: 96,077,723 (GRCm39) T573A probably benign Het
Mycbp2 A T 14: 103,376,845 (GRCm39) I3812N probably damaging Het
Myo15a A G 11: 60,415,301 (GRCm39) N3403S probably damaging Het
Nvl G A 1: 180,954,535 (GRCm39) Q343* probably null Het
Ocstamp A T 2: 165,239,842 (GRCm39) S115T probably benign Het
Or51ai2 A T 7: 103,586,793 (GRCm39) I69F probably benign Het
Otoa G A 7: 120,692,070 (GRCm39) probably null Het
Pcdhb20 A T 18: 37,639,175 (GRCm39) N567I probably damaging Het
Pgm5 A T 19: 24,839,011 (GRCm39) V48E possibly damaging Het
Phlpp1 T A 1: 106,314,174 (GRCm39) S1182R probably damaging Het
Pik3r4 T A 9: 105,527,805 (GRCm39) L386Q probably damaging Het
Pop1 A G 15: 34,508,785 (GRCm39) K287E possibly damaging Het
Pramel23 A T 4: 143,425,874 (GRCm39) L23* probably null Het
Rad54b A G 4: 11,612,777 (GRCm39) D803G probably damaging Het
Rbm26 G A 14: 105,354,400 (GRCm39) probably benign Het
Rspry1 C T 8: 95,362,059 (GRCm39) Q113* probably null Het
Siah2 T A 3: 58,599,191 (GRCm39) S16C probably benign Het
Sirpa C A 2: 129,472,017 (GRCm39) D481E probably damaging Het
Slc38a7 A C 8: 96,571,548 (GRCm39) D227E probably benign Het
Smc5 A G 19: 23,220,151 (GRCm39) V438A probably benign Het
Spast A G 17: 74,658,957 (GRCm39) E108G probably benign Het
Speg A G 1: 75,394,547 (GRCm39) E1752G possibly damaging Het
Tanc2 T G 11: 105,777,316 (GRCm39) probably null Het
Tgfbi T C 13: 56,773,950 (GRCm39) I243T possibly damaging Het
Tlr12 T C 4: 128,510,685 (GRCm39) S522G possibly damaging Het
Trav14-3 A G 14: 54,000,929 (GRCm39) I47V probably benign Het
Tsc22d4 T C 5: 137,760,906 (GRCm39) V109A possibly damaging Het
Ttl G A 2: 128,910,835 (GRCm39) R73H probably damaging Het
Usp34 C T 11: 23,317,491 (GRCm39) T850I possibly damaging Het
Vdac3 T C 8: 23,070,491 (GRCm39) Y140C probably damaging Het
Vmn2r120 T C 17: 57,843,659 (GRCm39) R62G probably benign Het
Vmn2r17 T A 5: 109,577,331 (GRCm39) Y461N probably damaging Het
Wt1 T A 2: 105,002,612 (GRCm39) F493I probably damaging Het
Other mutations in Atp8b2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02313:Atp8b2 APN 3 89,857,160 (GRCm39) missense probably damaging 1.00
IGL02472:Atp8b2 APN 3 89,861,546 (GRCm39) missense probably damaging 1.00
IGL02651:Atp8b2 APN 3 89,861,896 (GRCm39) splice site probably null
IGL03057:Atp8b2 APN 3 89,851,493 (GRCm39) missense probably damaging 1.00
IGL03349:Atp8b2 APN 3 89,865,124 (GRCm39) missense probably damaging 1.00
IGL03382:Atp8b2 APN 3 89,855,828 (GRCm39) missense probably benign 0.00
R0550:Atp8b2 UTSW 3 89,866,368 (GRCm39) splice site probably benign
R0784:Atp8b2 UTSW 3 89,864,380 (GRCm39) missense probably damaging 0.99
R1249:Atp8b2 UTSW 3 89,855,111 (GRCm39) missense possibly damaging 0.77
R1447:Atp8b2 UTSW 3 89,851,477 (GRCm39) missense probably damaging 1.00
R1568:Atp8b2 UTSW 3 89,857,155 (GRCm39) missense probably damaging 0.98
R1647:Atp8b2 UTSW 3 89,849,091 (GRCm39) missense probably benign 0.30
R1736:Atp8b2 UTSW 3 89,860,001 (GRCm39) missense probably damaging 0.98
R1907:Atp8b2 UTSW 3 89,853,583 (GRCm39) missense probably benign 0.28
R2656:Atp8b2 UTSW 3 89,849,065 (GRCm39) missense probably benign 0.05
R2888:Atp8b2 UTSW 3 89,865,600 (GRCm39) missense probably damaging 1.00
R3706:Atp8b2 UTSW 3 89,852,459 (GRCm39) missense probably damaging 0.99
R3708:Atp8b2 UTSW 3 89,852,459 (GRCm39) missense probably damaging 0.99
R3740:Atp8b2 UTSW 3 89,853,338 (GRCm39) missense probably benign
R3741:Atp8b2 UTSW 3 89,853,338 (GRCm39) missense probably benign
R3742:Atp8b2 UTSW 3 89,853,338 (GRCm39) missense probably benign
R3896:Atp8b2 UTSW 3 89,864,626 (GRCm39) missense probably damaging 1.00
R3914:Atp8b2 UTSW 3 89,861,755 (GRCm39) missense probably damaging 0.98
R4536:Atp8b2 UTSW 3 89,849,091 (GRCm39) missense probably benign 0.30
R4770:Atp8b2 UTSW 3 89,864,374 (GRCm39) missense probably damaging 0.97
R4859:Atp8b2 UTSW 3 89,853,287 (GRCm39) missense probably benign
R4905:Atp8b2 UTSW 3 89,856,315 (GRCm39) missense probably benign
R4925:Atp8b2 UTSW 3 89,853,930 (GRCm39) critical splice donor site probably null
R4955:Atp8b2 UTSW 3 89,860,227 (GRCm39) unclassified probably benign
R5433:Atp8b2 UTSW 3 89,860,216 (GRCm39) unclassified probably benign
R5458:Atp8b2 UTSW 3 89,853,329 (GRCm39) missense probably benign 0.00
R5517:Atp8b2 UTSW 3 89,853,338 (GRCm39) missense probably benign
R5663:Atp8b2 UTSW 3 89,849,101 (GRCm39) missense probably benign 0.19
R6056:Atp8b2 UTSW 3 89,853,528 (GRCm39) missense possibly damaging 0.79
R7069:Atp8b2 UTSW 3 89,861,878 (GRCm39) missense probably damaging 1.00
R7178:Atp8b2 UTSW 3 89,850,979 (GRCm39) missense possibly damaging 0.88
R7533:Atp8b2 UTSW 3 89,852,831 (GRCm39) missense
R7552:Atp8b2 UTSW 3 89,854,071 (GRCm39) missense probably damaging 1.00
R8061:Atp8b2 UTSW 3 89,853,527 (GRCm39) unclassified probably benign
R8491:Atp8b2 UTSW 3 89,865,676 (GRCm39) missense probably damaging 1.00
R8827:Atp8b2 UTSW 3 89,853,307 (GRCm39) missense
R8913:Atp8b2 UTSW 3 89,852,830 (GRCm39) missense
R8996:Atp8b2 UTSW 3 89,850,696 (GRCm39) missense probably damaging 1.00
R9154:Atp8b2 UTSW 3 89,865,927 (GRCm39) missense possibly damaging 0.52
R9341:Atp8b2 UTSW 3 89,855,811 (GRCm39) missense possibly damaging 0.95
R9343:Atp8b2 UTSW 3 89,855,811 (GRCm39) missense possibly damaging 0.95
R9439:Atp8b2 UTSW 3 89,851,492 (GRCm39) missense
R9466:Atp8b2 UTSW 3 89,851,484 (GRCm39) missense probably benign 0.33
R9590:Atp8b2 UTSW 3 89,865,693 (GRCm39) nonsense probably null
R9651:Atp8b2 UTSW 3 89,865,603 (GRCm39) missense probably damaging 1.00
R9739:Atp8b2 UTSW 3 89,853,403 (GRCm39) missense probably benign
R9778:Atp8b2 UTSW 3 89,861,865 (GRCm39) missense possibly damaging 0.95
Z1088:Atp8b2 UTSW 3 89,861,875 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GGATTCCGAACTGTGAATGGC -3'
(R):5'- ACACACGCACGAGTTCTTCC -3'

Sequencing Primer
(F):5'- CGACCAGGCCTATCTGCTGTC -3'
(R):5'- GTGTCACACTGTCATGTCAGAAG -3'
Posted On 2018-10-18