Mutagenetix > Incidental Mutation

Incidental Mutation 'R6923:Or5b94'

539761

Institutional Source

Beutler Lab

Gene Symbol

Or5b94

Ensembl Gene

ENSMUSG00000044441

Gene Name

olfactory receptor family 5 subfamily B member 94

Synonyms

Olfr1442, GA_x6K02T2RE5P-3000589-3001527, MOR202-9

MMRRC Submission

045381-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

R6923 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

12651543-12652607 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 12652409 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 280 (I280N)

Ref Sequence

ENSEMBL: ENSMUSP00000146650 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000049724] [ENSMUST00000057924] [ENSMUST00000207341] [ENSMUST00000208494] [ENSMUST00000208657] [ENSMUST00000213486] [ENSMUST00000215134]

AlphaFold

Q0VEV7

Predicted Effect

probably benign
Transcript: ENSMUST00000049724

SMART Domains

Protein: ENSMUSP00000059886
Gene: ENSMUSG00000045030

Domain	Start	End	E-Value	Type
Pfam:7tm_4	29	306	2.4e-50	PFAM
Pfam:7TM_GPCR_Srsx	33	303	1.5e-6	PFAM
Pfam:7tm_1	39	288	8.6e-22	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000057924
AA Change: I280N

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000050632
Gene: ENSMUSG00000044441
AA Change: I280N

Domain	Start	End	E-Value	Type
Pfam:7tm_4	29	306	7.9e-49	PFAM
Pfam:7TM_GPCR_Srsx	33	303	1.6e-6	PFAM
Pfam:7tm_1	39	288	1.6e-19	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000207341
AA Change: I280N

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000208494
AA Change: I280N

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000208657
AA Change: I280N

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

Predicted Effect

probably benign
Transcript: ENSMUST00000213486

Predicted Effect

probably benign
Transcript: ENSMUST00000215134

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.2%
20x: 97.4%

Validation Efficiency

100% (59/59)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 58 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Albfm1	A	G	5: 90,725,652 (GRCm39)	N288S	probably benign	Het
Ap4b1	T	A	3: 103,719,530 (GRCm39)	D81E	probably benign	Het
Atg16l1	A	T	1: 87,702,078 (GRCm39)		probably null	Het
Atp11a	A	G	8: 12,906,949 (GRCm39)	T459A	probably damaging	Het
Bloc1s5	T	A	13: 38,815,040 (GRCm39)	I40F	probably damaging	Het
Bltp2	T	A	11: 78,165,452 (GRCm39)	S1323T	possibly damaging	Het
Capn5	T	A	7: 97,778,461 (GRCm39)	Q386L	probably damaging	Het
Cbfa2t2	C	T	2: 154,376,903 (GRCm39)	H529Y	probably damaging	Het
Cd3d	T	C	9: 44,897,157 (GRCm39)		probably benign	Het
Cenpa	A	G	5: 30,829,806 (GRCm39)		probably null	Het
Chit1	A	T	1: 134,077,163 (GRCm39)	Y322F	probably null	Het
Cntnap5c	T	A	17: 58,399,345 (GRCm39)	N399K	possibly damaging	Het
Dock8	A	T	19: 25,072,970 (GRCm39)	T417S	probably benign	Het
Firrm	A	G	1: 163,814,454 (GRCm39)		probably null	Het
Fkbp2	A	G	19: 6,956,537 (GRCm39)			Het
Fsip1	G	A	2: 118,080,394 (GRCm39)	R121C	probably benign	Het
Gbp2b	T	C	3: 142,306,320 (GRCm39)	I131T	probably benign	Het
Gm12695	T	C	4: 96,658,053 (GRCm39)	N39D	probably benign	Het
Gm4922	T	C	10: 18,659,616 (GRCm39)	R369G	probably damaging	Het
Gpatch3	C	T	4: 133,309,836 (GRCm39)	L390F	probably damaging	Het
Gpd2	G	A	2: 57,245,800 (GRCm39)	M443I	probably damaging	Het
Gpt2	G	A	8: 86,244,681 (GRCm39)	E325K	probably benign	Het
Hdac1-ps	A	G	17: 78,800,343 (GRCm39)	T445A	possibly damaging	Het
Jph3	A	G	8: 122,480,110 (GRCm39)	T263A	possibly damaging	Het
Me3	C	A	7: 89,495,093 (GRCm39)	A337E	probably damaging	Het
Mndal	A	C	1: 173,712,264 (GRCm39)		probably null	Het
Msantd5l	C	T	11: 51,144,808 (GRCm39)	D158N	probably damaging	Het
Muc6	C	T	7: 141,217,453 (GRCm39)	E2342K	possibly damaging	Het
Neb	A	G	2: 52,076,076 (GRCm39)	V5659A	probably damaging	Het
Nkapd1	T	A	9: 50,521,610 (GRCm39)	I104L	probably benign	Het
Nrxn1	G	A	17: 91,395,661 (GRCm39)	A165V	probably benign	Het
Or5b97	T	C	19: 12,878,676 (GRCm39)	N156S	probably benign	Het
Orc2	A	G	1: 58,539,534 (GRCm39)	L35S	probably benign	Het
Pax4	A	G	6: 28,447,118 (GRCm39)		probably null	Het
Pcdhb7	C	T	18: 37,475,522 (GRCm39)		probably null	Het
Pla2r1	C	T	2: 60,345,310 (GRCm39)	E349K	probably benign	Het
Polr2a	C	T	11: 69,626,787 (GRCm39)	A1516T	probably benign	Het
Pramel23	A	T	4: 143,425,676 (GRCm39)	I89N	probably benign	Het
Prpf38a	G	T	4: 108,427,401 (GRCm39)	D187E	possibly damaging	Het
Rdh16f1	T	A	10: 127,624,737 (GRCm39)		probably null	Het
S100z	T	A	13: 95,615,090 (GRCm39)	D25V	probably damaging	Het
Scamp2	T	G	9: 57,488,895 (GRCm39)	F199V	probably damaging	Het
Semp2l2b	C	A	10: 21,943,654 (GRCm39)	G109C	probably damaging	Het
Senp2	T	G	16: 21,830,326 (GRCm39)		probably benign	Het
Sltm	T	A	9: 70,481,892 (GRCm39)	S365T	probably damaging	Het
Smg6	C	G	11: 74,820,169 (GRCm39)	P147A	possibly damaging	Het
Spem2	T	A	11: 69,708,603 (GRCm39)	R121W	probably damaging	Het
Sufu	A	G	19: 46,439,405 (GRCm39)		probably null	Het
Syt2	T	C	1: 134,674,501 (GRCm39)	V313A	possibly damaging	Het
Tet2	C	T	3: 133,185,102 (GRCm39)		probably null	Het
Tfeb	T	A	17: 48,097,908 (GRCm39)	I232N	probably benign	Het
Ticrr	T	G	7: 79,341,601 (GRCm39)	I1062M	probably damaging	Het
Vmn2r111	T	C	17: 22,778,032 (GRCm39)	N549S	possibly damaging	Het
Vrk2	G	A	11: 26,439,893 (GRCm39)	A226V	probably damaging	Het
Wnk1	A	T	6: 119,942,639 (GRCm39)		probably benign	Het
Xpo4	G	T	14: 57,841,168 (GRCm39)	T505K	probably benign	Het
Yy1	A	T	12: 108,759,594 (GRCm39)	I86F	probably benign	Het
Zc3h15	A	G	2: 83,487,400 (GRCm39)	D73G	possibly damaging	Het

Other mutations in Or5b94

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00336:Or5b94	APN	19	12,651,924 (GRCm39)	nonsense	probably null
IGL00969:Or5b94	APN	19	12,651,605 (GRCm39)	missense	probably damaging	1.00
IGL01788:Or5b94	APN	19	12,652,442 (GRCm39)	missense	probably damaging	0.97
IGL02081:Or5b94	APN	19	12,652,180 (GRCm39)	missense	probably benign
IGL02335:Or5b94	APN	19	12,651,602 (GRCm39)	missense	probably damaging	0.97
IGL02383:Or5b94	APN	19	12,651,899 (GRCm39)	missense	probably benign	0.01
IGL02389:Or5b94	APN	19	12,651,899 (GRCm39)	missense	probably benign	0.00
IGL02484:Or5b94	APN	19	12,652,223 (GRCm39)	missense	possibly damaging	0.56
IGL02682:Or5b94	APN	19	12,652,033 (GRCm39)	missense	probably damaging	0.98
IGL03136:Or5b94	APN	19	12,652,331 (GRCm39)	missense	probably damaging	0.99
R0109:Or5b94	UTSW	19	12,652,224 (GRCm39)	missense	probably benign	0.02
R0109:Or5b94	UTSW	19	12,652,224 (GRCm39)	missense	probably benign	0.02
R0112:Or5b94	UTSW	19	12,652,121 (GRCm39)	missense	probably benign
R4005:Or5b94	UTSW	19	12,652,210 (GRCm39)	missense	probably benign	0.05
R4346:Or5b94	UTSW	19	12,651,592 (GRCm39)	missense	probably benign	0.03
R4611:Or5b94	UTSW	19	12,652,318 (GRCm39)	missense	probably damaging	1.00
R5858:Or5b94	UTSW	19	12,651,743 (GRCm39)	missense	probably damaging	1.00
R5944:Or5b94	UTSW	19	12,652,283 (GRCm39)	missense	probably damaging	1.00
R6406:Or5b94	UTSW	19	12,652,184 (GRCm39)	missense	probably benign	0.21
R7710:Or5b94	UTSW	19	12,652,340 (GRCm39)	missense	probably damaging	1.00
R8699:Or5b94	UTSW	19	12,652,246 (GRCm39)	missense	probably benign	0.21
Z1176:Or5b94	UTSW	19	12,651,674 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TGGAGCAGGCTTCATTATCTG -3'
(R):5'- ACTCTAGGTCACTAGGTACCTAAG -3'

Sequencing Primer
(F):5'- GAGCAGGCTTCATTATCTGTTCTGC -3'
(R):5'- GTCACTAGGTACCTAAGAAAATGTG -3'

Posted On

2018-11-06