Incidental Mutation 'R6944:Vmn2r14'
ID |
540765 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r14
|
Ensembl Gene |
ENSMUSG00000091059 |
Gene Name |
vomeronasal 2, receptor 14 |
Synonyms |
EG231591 |
MMRRC Submission |
045058-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.526)
|
Stock # |
R6944 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
109362822-109372488 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 109363925 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Alanine
at position 664
(T664A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000128015
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000170341]
|
AlphaFold |
E9Q759 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000170341
AA Change: T664A
PolyPhen 2
Score 0.220 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000128015 Gene: ENSMUSG00000091059 AA Change: T664A
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
26 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
76 |
466 |
8.3e-31 |
PFAM |
Pfam:NCD3G
|
507 |
561 |
1.1e-17 |
PFAM |
Pfam:7tm_3
|
594 |
829 |
1.2e-55 |
PFAM |
|
Meta Mutation Damage Score |
0.0846 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.5%
- 20x: 98.2%
|
Validation Efficiency |
97% (75/77) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 75 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcb1b |
T |
G |
5: 8,863,693 (GRCm39) |
V216G |
probably damaging |
Het |
Abcb5 |
T |
C |
12: 118,875,265 (GRCm39) |
R636G |
probably benign |
Het |
Ago1 |
G |
T |
4: 126,354,215 (GRCm39) |
F198L |
possibly damaging |
Het |
Ankrd42 |
C |
T |
7: 92,268,755 (GRCm39) |
|
probably null |
Het |
Anxa11 |
T |
A |
14: 25,875,176 (GRCm39) |
F274I |
probably damaging |
Het |
Ascc1 |
T |
C |
10: 59,849,475 (GRCm39) |
L122P |
probably damaging |
Het |
Bptf |
T |
C |
11: 106,971,649 (GRCm39) |
S953G |
probably damaging |
Het |
Chml |
T |
A |
1: 175,515,727 (GRCm39) |
N65Y |
probably damaging |
Het |
Clcc1 |
A |
G |
3: 108,578,284 (GRCm39) |
K262E |
probably damaging |
Het |
Clhc1 |
T |
G |
11: 29,519,346 (GRCm39) |
D384E |
probably damaging |
Het |
Cnot2 |
G |
A |
10: 116,373,128 (GRCm39) |
|
probably benign |
Het |
Cntnap1 |
T |
C |
11: 101,073,730 (GRCm39) |
V627A |
probably damaging |
Het |
Col6a4 |
A |
G |
9: 105,949,370 (GRCm39) |
V755A |
probably damaging |
Het |
Cyp4f18 |
T |
A |
8: 72,743,738 (GRCm39) |
I406F |
probably benign |
Het |
Dclre1a |
T |
C |
19: 56,533,451 (GRCm39) |
E381G |
possibly damaging |
Het |
Dnah1 |
A |
G |
14: 30,990,861 (GRCm39) |
Y3153H |
probably damaging |
Het |
Dnah8 |
C |
A |
17: 31,013,633 (GRCm39) |
D3791E |
probably benign |
Het |
Dnah9 |
T |
C |
11: 65,975,975 (GRCm39) |
E1358G |
possibly damaging |
Het |
Eef1g |
G |
A |
19: 8,945,656 (GRCm39) |
R30H |
probably benign |
Het |
Egln3 |
A |
T |
12: 54,230,738 (GRCm39) |
I181N |
probably benign |
Het |
Entpd6 |
A |
G |
2: 150,605,519 (GRCm39) |
T250A |
probably damaging |
Het |
Epb41l5 |
C |
T |
1: 119,536,859 (GRCm39) |
R344Q |
probably damaging |
Het |
Fam20b |
T |
C |
1: 156,515,091 (GRCm39) |
D258G |
probably benign |
Het |
Fbxw18 |
A |
T |
9: 109,531,655 (GRCm39) |
D21E |
probably damaging |
Het |
Fbxw21 |
T |
C |
9: 108,986,603 (GRCm39) |
E92G |
probably damaging |
Het |
Fzd6 |
T |
A |
15: 38,889,212 (GRCm39) |
M110K |
possibly damaging |
Het |
Golgb1 |
C |
T |
16: 36,732,475 (GRCm39) |
P574L |
probably benign |
Het |
Gpr153 |
A |
G |
4: 152,363,820 (GRCm39) |
E80G |
probably damaging |
Het |
Gvin2 |
G |
A |
7: 105,551,187 (GRCm39) |
Q622* |
probably null |
Het |
Kcnt1 |
T |
C |
2: 25,767,840 (GRCm39) |
|
probably benign |
Het |
Kcnt2 |
T |
G |
1: 140,511,803 (GRCm39) |
V962G |
probably benign |
Het |
Malt1 |
T |
C |
18: 65,570,991 (GRCm39) |
V109A |
probably benign |
Het |
Marchf7 |
A |
G |
2: 60,064,587 (GRCm39) |
I288V |
probably benign |
Het |
Mief1 |
C |
T |
15: 80,133,644 (GRCm39) |
R234C |
probably damaging |
Het |
Morc3 |
A |
G |
16: 93,667,460 (GRCm39) |
S613G |
probably benign |
Het |
Myt1 |
A |
G |
2: 181,439,387 (GRCm39) |
E345G |
possibly damaging |
Het |
Napb |
T |
C |
2: 148,548,889 (GRCm39) |
T133A |
probably benign |
Het |
Nwd1 |
T |
C |
8: 73,380,162 (GRCm39) |
V16A |
possibly damaging |
Het |
Oas1f |
G |
A |
5: 120,986,247 (GRCm39) |
E67K |
probably benign |
Het |
Obscn |
T |
C |
11: 58,929,756 (GRCm39) |
K5153R |
probably damaging |
Het |
Or2w3b |
T |
A |
11: 58,623,068 (GRCm39) |
S308C |
possibly damaging |
Het |
Or5a3 |
G |
T |
19: 12,400,628 (GRCm39) |
M318I |
probably benign |
Het |
Or5g26 |
C |
T |
2: 85,494,195 (GRCm39) |
M194I |
probably benign |
Het |
Or6d12 |
T |
C |
6: 116,492,791 (GRCm39) |
F18L |
possibly damaging |
Het |
Pdcd2 |
T |
C |
17: 15,745,632 (GRCm39) |
N185S |
possibly damaging |
Het |
Pgap1 |
A |
T |
1: 54,569,320 (GRCm39) |
W349R |
probably damaging |
Het |
Prpf39 |
T |
A |
12: 65,089,454 (GRCm39) |
V64E |
probably benign |
Het |
Ptpn13 |
T |
A |
5: 103,624,857 (GRCm39) |
W54R |
probably null |
Het |
Rbms3 |
G |
T |
9: 116,939,173 (GRCm39) |
P29Q |
probably damaging |
Het |
Rnf123 |
A |
G |
9: 107,940,822 (GRCm39) |
L679P |
probably benign |
Het |
Samd4 |
T |
A |
14: 47,254,092 (GRCm39) |
D84E |
possibly damaging |
Het |
Scarf1 |
T |
C |
11: 75,413,032 (GRCm39) |
V426A |
probably benign |
Het |
Slc12a1 |
A |
G |
2: 125,002,454 (GRCm39) |
N145D |
probably damaging |
Het |
Slc2a6 |
A |
T |
2: 26,916,076 (GRCm39) |
M99K |
probably damaging |
Het |
Slc34a2 |
A |
T |
5: 53,222,225 (GRCm39) |
I306L |
probably benign |
Het |
Slx4ip |
A |
G |
2: 136,910,195 (GRCm39) |
K397E |
probably damaging |
Het |
Smr3a |
C |
T |
5: 88,155,949 (GRCm39) |
|
probably benign |
Het |
Spata31h1 |
A |
C |
10: 82,132,056 (GRCm39) |
I318R |
probably benign |
Het |
Spef2 |
T |
C |
15: 9,592,835 (GRCm39) |
E1502G |
probably damaging |
Het |
Sri |
A |
T |
5: 8,113,365 (GRCm39) |
T119S |
probably benign |
Het |
Synrg |
T |
A |
11: 83,915,912 (GRCm39) |
L1085H |
probably damaging |
Het |
Taf7 |
A |
T |
18: 37,775,910 (GRCm39) |
L219H |
probably damaging |
Het |
Tmco3 |
T |
A |
8: 13,353,729 (GRCm39) |
V347E |
probably damaging |
Het |
Tmem8b |
A |
T |
4: 43,674,465 (GRCm39) |
I250F |
probably damaging |
Het |
Tom1l2 |
A |
G |
11: 60,139,817 (GRCm39) |
V239A |
probably damaging |
Het |
Trpm1 |
T |
A |
7: 63,893,181 (GRCm39) |
M1011K |
probably damaging |
Het |
Tspan9 |
A |
T |
6: 127,942,769 (GRCm39) |
Y153N |
probably benign |
Het |
Ttll11 |
T |
C |
2: 35,642,306 (GRCm39) |
H675R |
probably benign |
Het |
Unc50 |
C |
T |
1: 37,471,743 (GRCm39) |
T131M |
probably damaging |
Het |
Vgf |
T |
A |
5: 137,061,206 (GRCm39) |
I456N |
probably damaging |
Het |
Vmn1r223 |
A |
G |
13: 23,433,483 (GRCm39) |
I26V |
unknown |
Het |
Vmn1r39 |
T |
C |
6: 66,782,205 (GRCm39) |
M1V |
probably null |
Het |
Vmn2r111 |
T |
C |
17: 22,778,032 (GRCm39) |
N549S |
possibly damaging |
Het |
Vmn2r96 |
T |
A |
17: 18,817,891 (GRCm39) |
F489L |
probably benign |
Het |
Vmn2r-ps158 |
T |
C |
7: 42,697,393 (GRCm39) |
F817L |
possibly damaging |
Het |
|
Other mutations in Vmn2r14 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01472:Vmn2r14
|
APN |
5 |
109,364,180 (GRCm39) |
nonsense |
probably null |
|
IGL01504:Vmn2r14
|
APN |
5 |
109,369,285 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01828:Vmn2r14
|
APN |
5 |
109,372,443 (GRCm39) |
missense |
possibly damaging |
0.71 |
IGL02093:Vmn2r14
|
APN |
5 |
109,368,275 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02103:Vmn2r14
|
APN |
5 |
109,372,349 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02123:Vmn2r14
|
APN |
5 |
109,367,933 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02145:Vmn2r14
|
APN |
5 |
109,368,454 (GRCm39) |
nonsense |
probably null |
|
IGL02676:Vmn2r14
|
APN |
5 |
109,367,882 (GRCm39) |
missense |
probably benign |
0.03 |
IGL02720:Vmn2r14
|
APN |
5 |
109,369,305 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02877:Vmn2r14
|
APN |
5 |
109,368,054 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02974:Vmn2r14
|
APN |
5 |
109,369,292 (GRCm39) |
missense |
possibly damaging |
0.55 |
IGL03151:Vmn2r14
|
APN |
5 |
109,364,260 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03297:Vmn2r14
|
APN |
5 |
109,363,973 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03386:Vmn2r14
|
APN |
5 |
109,368,350 (GRCm39) |
missense |
possibly damaging |
0.90 |
IGL03394:Vmn2r14
|
APN |
5 |
109,367,702 (GRCm39) |
missense |
probably null |
0.83 |
ANU74:Vmn2r14
|
UTSW |
5 |
109,366,910 (GRCm39) |
missense |
probably benign |
0.00 |
R0316:Vmn2r14
|
UTSW |
5 |
109,366,762 (GRCm39) |
missense |
probably benign |
0.07 |
R0755:Vmn2r14
|
UTSW |
5 |
109,364,226 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1219:Vmn2r14
|
UTSW |
5 |
109,372,440 (GRCm39) |
missense |
probably benign |
0.17 |
R1321:Vmn2r14
|
UTSW |
5 |
109,364,117 (GRCm39) |
missense |
probably benign |
0.08 |
R1465:Vmn2r14
|
UTSW |
5 |
109,368,195 (GRCm39) |
missense |
possibly damaging |
0.47 |
R1465:Vmn2r14
|
UTSW |
5 |
109,368,195 (GRCm39) |
missense |
possibly damaging |
0.47 |
R1509:Vmn2r14
|
UTSW |
5 |
109,363,862 (GRCm39) |
missense |
probably benign |
0.00 |
R1551:Vmn2r14
|
UTSW |
5 |
109,369,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R1628:Vmn2r14
|
UTSW |
5 |
109,367,838 (GRCm39) |
missense |
probably benign |
0.00 |
R1668:Vmn2r14
|
UTSW |
5 |
109,366,913 (GRCm39) |
nonsense |
probably null |
|
R2013:Vmn2r14
|
UTSW |
5 |
109,369,109 (GRCm39) |
missense |
probably benign |
0.00 |
R2201:Vmn2r14
|
UTSW |
5 |
109,366,698 (GRCm39) |
splice site |
probably null |
|
R2417:Vmn2r14
|
UTSW |
5 |
109,372,329 (GRCm39) |
missense |
probably benign |
0.00 |
R3029:Vmn2r14
|
UTSW |
5 |
109,363,776 (GRCm39) |
missense |
probably damaging |
1.00 |
R3120:Vmn2r14
|
UTSW |
5 |
109,372,431 (GRCm39) |
missense |
probably null |
0.00 |
R3729:Vmn2r14
|
UTSW |
5 |
109,364,095 (GRCm39) |
missense |
probably damaging |
1.00 |
R3762:Vmn2r14
|
UTSW |
5 |
109,368,033 (GRCm39) |
missense |
probably benign |
0.02 |
R3943:Vmn2r14
|
UTSW |
5 |
109,363,930 (GRCm39) |
missense |
probably damaging |
1.00 |
R3944:Vmn2r14
|
UTSW |
5 |
109,363,930 (GRCm39) |
missense |
probably damaging |
1.00 |
R4222:Vmn2r14
|
UTSW |
5 |
109,364,149 (GRCm39) |
missense |
probably benign |
0.00 |
R4224:Vmn2r14
|
UTSW |
5 |
109,364,149 (GRCm39) |
missense |
probably benign |
0.00 |
R4239:Vmn2r14
|
UTSW |
5 |
109,364,277 (GRCm39) |
critical splice acceptor site |
probably null |
|
R4240:Vmn2r14
|
UTSW |
5 |
109,364,277 (GRCm39) |
critical splice acceptor site |
probably null |
|
R4782:Vmn2r14
|
UTSW |
5 |
109,369,370 (GRCm39) |
missense |
probably benign |
0.01 |
R4832:Vmn2r14
|
UTSW |
5 |
109,363,976 (GRCm39) |
missense |
probably damaging |
1.00 |
R4884:Vmn2r14
|
UTSW |
5 |
109,369,384 (GRCm39) |
splice site |
probably null |
|
R4896:Vmn2r14
|
UTSW |
5 |
109,368,246 (GRCm39) |
missense |
probably benign |
0.19 |
R5004:Vmn2r14
|
UTSW |
5 |
109,368,246 (GRCm39) |
missense |
probably benign |
0.19 |
R5117:Vmn2r14
|
UTSW |
5 |
109,363,961 (GRCm39) |
missense |
probably benign |
0.16 |
R5285:Vmn2r14
|
UTSW |
5 |
109,365,442 (GRCm39) |
missense |
probably damaging |
0.98 |
R5413:Vmn2r14
|
UTSW |
5 |
109,369,154 (GRCm39) |
missense |
probably benign |
0.29 |
R5569:Vmn2r14
|
UTSW |
5 |
109,368,261 (GRCm39) |
missense |
probably benign |
0.44 |
R5701:Vmn2r14
|
UTSW |
5 |
109,367,816 (GRCm39) |
missense |
probably damaging |
1.00 |
R5726:Vmn2r14
|
UTSW |
5 |
109,365,486 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5763:Vmn2r14
|
UTSW |
5 |
109,363,724 (GRCm39) |
missense |
possibly damaging |
0.49 |
R5872:Vmn2r14
|
UTSW |
5 |
109,369,222 (GRCm39) |
missense |
probably benign |
|
R5985:Vmn2r14
|
UTSW |
5 |
109,368,082 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6268:Vmn2r14
|
UTSW |
5 |
109,369,283 (GRCm39) |
missense |
possibly damaging |
0.87 |
R6273:Vmn2r14
|
UTSW |
5 |
109,369,133 (GRCm39) |
missense |
probably benign |
0.44 |
R6409:Vmn2r14
|
UTSW |
5 |
109,364,096 (GRCm39) |
missense |
probably benign |
0.09 |
R6944:Vmn2r14
|
UTSW |
5 |
109,364,140 (GRCm39) |
missense |
probably benign |
0.06 |
R7608:Vmn2r14
|
UTSW |
5 |
109,369,276 (GRCm39) |
missense |
probably benign |
0.03 |
R7740:Vmn2r14
|
UTSW |
5 |
109,368,324 (GRCm39) |
missense |
probably benign |
0.41 |
R7768:Vmn2r14
|
UTSW |
5 |
109,368,086 (GRCm39) |
missense |
probably benign |
0.01 |
R7804:Vmn2r14
|
UTSW |
5 |
109,368,324 (GRCm39) |
missense |
probably benign |
0.41 |
R7872:Vmn2r14
|
UTSW |
5 |
109,369,219 (GRCm39) |
missense |
probably benign |
0.02 |
R7993:Vmn2r14
|
UTSW |
5 |
109,363,862 (GRCm39) |
missense |
probably benign |
0.00 |
R8006:Vmn2r14
|
UTSW |
5 |
109,368,324 (GRCm39) |
missense |
probably benign |
0.41 |
R8007:Vmn2r14
|
UTSW |
5 |
109,368,324 (GRCm39) |
missense |
probably benign |
0.41 |
R8187:Vmn2r14
|
UTSW |
5 |
109,368,420 (GRCm39) |
missense |
probably benign |
0.03 |
R8369:Vmn2r14
|
UTSW |
5 |
109,369,342 (GRCm39) |
missense |
probably damaging |
1.00 |
R8463:Vmn2r14
|
UTSW |
5 |
109,369,340 (GRCm39) |
missense |
probably benign |
0.30 |
R8968:Vmn2r14
|
UTSW |
5 |
109,365,533 (GRCm39) |
missense |
probably benign |
0.01 |
R9008:Vmn2r14
|
UTSW |
5 |
109,367,893 (GRCm39) |
missense |
probably benign |
0.00 |
R9030:Vmn2r14
|
UTSW |
5 |
109,368,054 (GRCm39) |
missense |
probably damaging |
0.99 |
R9039:Vmn2r14
|
UTSW |
5 |
109,367,902 (GRCm39) |
nonsense |
probably null |
|
R9150:Vmn2r14
|
UTSW |
5 |
109,367,783 (GRCm39) |
missense |
probably damaging |
1.00 |
R9164:Vmn2r14
|
UTSW |
5 |
109,364,087 (GRCm39) |
missense |
probably damaging |
1.00 |
R9216:Vmn2r14
|
UTSW |
5 |
109,369,112 (GRCm39) |
missense |
probably benign |
0.01 |
R9225:Vmn2r14
|
UTSW |
5 |
109,369,288 (GRCm39) |
missense |
probably damaging |
1.00 |
R9245:Vmn2r14
|
UTSW |
5 |
109,368,176 (GRCm39) |
missense |
possibly damaging |
0.89 |
R9342:Vmn2r14
|
UTSW |
5 |
109,368,428 (GRCm39) |
missense |
probably damaging |
1.00 |
R9472:Vmn2r14
|
UTSW |
5 |
109,367,962 (GRCm39) |
missense |
probably benign |
0.00 |
R9678:Vmn2r14
|
UTSW |
5 |
109,364,041 (GRCm39) |
missense |
probably damaging |
1.00 |
R9774:Vmn2r14
|
UTSW |
5 |
109,369,126 (GRCm39) |
missense |
probably benign |
0.07 |
Z1177:Vmn2r14
|
UTSW |
5 |
109,367,741 (GRCm39) |
missense |
probably benign |
0.33 |
|
Predicted Primers |
PCR Primer
(F):5'- GCAATGACTGAGCCTTTGTTG -3'
(R):5'- GCCCTCACAGTTCTAGTACTAGTC -3'
Sequencing Primer
(F):5'- TGTATCTCTGTCAATAAAGGGAGG -3'
(R):5'- CACAGTTCTAGTACTAGTCACTTTTG -3'
|
Posted On |
2018-11-28 |