Incidental Mutation 'R6970:Vmn2r115'
ID |
542220 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r115
|
Ensembl Gene |
ENSMUSG00000091076 |
Gene Name |
vomeronasal 2, receptor 115 |
Synonyms |
V2Rp4, EG638102 |
MMRRC Submission |
045080-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.084)
|
Stock # |
R6970 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
23562951-23579102 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 23564989 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glycine to Aspartic acid
at position 292
(G292D)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000131447
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000168175]
|
AlphaFold |
E9Q0E7 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000168175
AA Change: G292D
PolyPhen 2
Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000131447 Gene: ENSMUSG00000091076 AA Change: G292D
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
73 |
471 |
1.4e-28 |
PFAM |
Pfam:NCD3G
|
512 |
565 |
2.9e-20 |
PFAM |
Pfam:7tm_3
|
598 |
833 |
5e-55 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.2%
- 20x: 97.2%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 82 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acadsb |
T |
C |
7: 131,036,044 (GRCm39) |
Y285H |
possibly damaging |
Het |
Adam17 |
A |
G |
12: 21,395,669 (GRCm39) |
S285P |
probably benign |
Het |
Adcy10 |
A |
G |
1: 165,384,485 (GRCm39) |
N1082S |
probably benign |
Het |
Ahdc1 |
T |
A |
4: 132,789,656 (GRCm39) |
L299Q |
possibly damaging |
Het |
Ambra1 |
T |
A |
2: 91,602,945 (GRCm39) |
|
probably benign |
Het |
Arfgef1 |
T |
C |
1: 10,223,903 (GRCm39) |
Q1465R |
probably damaging |
Het |
Arfgef1 |
G |
T |
1: 10,223,904 (GRCm39) |
Q1465K |
probably damaging |
Het |
Atp8a1 |
A |
G |
5: 67,895,805 (GRCm39) |
V543A |
probably damaging |
Het |
BC034090 |
T |
A |
1: 155,117,185 (GRCm39) |
D311V |
probably damaging |
Het |
Blnk |
G |
T |
19: 40,950,821 (GRCm39) |
P110Q |
probably damaging |
Het |
Cc2d2a |
A |
G |
5: 43,875,927 (GRCm39) |
E968G |
probably damaging |
Het |
Ccdc14 |
A |
T |
16: 34,529,903 (GRCm39) |
E394V |
probably damaging |
Het |
Ccdc162 |
A |
T |
10: 41,491,954 (GRCm39) |
H1086Q |
probably benign |
Het |
Ccdc85b |
T |
A |
19: 5,507,248 (GRCm39) |
I60F |
probably damaging |
Het |
Ceacam20 |
T |
A |
7: 19,723,902 (GRCm39) |
L562Q |
probably damaging |
Het |
Cntrl |
T |
C |
2: 35,008,149 (GRCm39) |
F188L |
probably benign |
Het |
Cplane1 |
T |
C |
15: 8,217,032 (GRCm39) |
V750A |
probably benign |
Het |
Dclk1 |
A |
T |
3: 55,374,022 (GRCm39) |
|
probably benign |
Het |
Ddx20 |
A |
T |
3: 105,587,674 (GRCm39) |
L434H |
probably damaging |
Het |
Ddx51 |
G |
A |
5: 110,804,728 (GRCm39) |
V547M |
probably damaging |
Het |
Dnah11 |
T |
A |
12: 118,072,679 (GRCm39) |
Q1472L |
probably benign |
Het |
Dnajb13 |
T |
C |
7: 100,156,629 (GRCm39) |
E149G |
probably damaging |
Het |
Efcab3 |
A |
G |
11: 104,667,182 (GRCm39) |
E1422G |
probably benign |
Het |
Eif1ad8 |
G |
T |
12: 87,563,388 (GRCm39) |
|
probably benign |
Het |
Fat4 |
A |
G |
3: 39,035,924 (GRCm39) |
N3192S |
probably damaging |
Het |
Fat4 |
A |
T |
3: 39,050,120 (GRCm39) |
D3994V |
probably damaging |
Het |
Fcgr1 |
C |
A |
3: 96,191,936 (GRCm39) |
|
probably null |
Het |
Gm12185 |
G |
A |
11: 48,798,739 (GRCm39) |
R585* |
probably null |
Het |
Gm32687 |
A |
G |
10: 81,715,304 (GRCm39) |
H232R |
probably benign |
Het |
Gm5431 |
G |
T |
11: 48,779,317 (GRCm39) |
A535D |
probably damaging |
Het |
Jarid2 |
C |
T |
13: 45,056,461 (GRCm39) |
P556S |
probably damaging |
Het |
Map3k4 |
C |
A |
17: 12,467,803 (GRCm39) |
G1077V |
probably damaging |
Het |
Mast4 |
C |
T |
13: 102,941,155 (GRCm39) |
V301I |
probably damaging |
Het |
Mlxip |
A |
G |
5: 123,583,735 (GRCm39) |
T433A |
possibly damaging |
Het |
Ms4a20 |
A |
G |
19: 11,089,678 (GRCm39) |
|
probably null |
Het |
Mus81 |
G |
T |
19: 5,535,554 (GRCm39) |
H199Q |
probably benign |
Het |
Mylk3 |
G |
A |
8: 86,085,892 (GRCm39) |
T54M |
probably damaging |
Het |
Nalcn |
A |
G |
14: 123,551,506 (GRCm39) |
F1034L |
possibly damaging |
Het |
Nfatc1 |
A |
C |
18: 80,710,228 (GRCm39) |
S513A |
probably benign |
Het |
Ninj2 |
A |
G |
6: 120,175,092 (GRCm39) |
I88V |
possibly damaging |
Het |
Nomo1 |
C |
T |
7: 45,695,391 (GRCm39) |
P277L |
probably damaging |
Het |
Nup214 |
C |
T |
2: 31,941,810 (GRCm39) |
S571L |
probably damaging |
Het |
Or10g9b |
T |
A |
9: 39,918,009 (GRCm39) |
M79L |
probably benign |
Het |
Or5b3 |
T |
A |
19: 13,388,792 (GRCm39) |
N286K |
probably damaging |
Het |
Or9a7 |
T |
C |
6: 40,521,590 (GRCm39) |
S108G |
probably benign |
Het |
Pcdh15 |
C |
T |
10: 74,338,519 (GRCm39) |
P1005S |
probably damaging |
Het |
Pkhd1l1 |
G |
A |
15: 44,375,070 (GRCm39) |
A942T |
possibly damaging |
Het |
Plagl1 |
T |
C |
10: 13,000,860 (GRCm39) |
C34R |
probably damaging |
Het |
Plekha2 |
T |
C |
8: 25,549,280 (GRCm39) |
Q168R |
probably benign |
Het |
Plekha6 |
G |
A |
1: 133,191,556 (GRCm39) |
A146T |
probably benign |
Het |
Plekhm3 |
T |
G |
1: 64,931,912 (GRCm39) |
K564T |
possibly damaging |
Het |
Plpp2 |
A |
G |
10: 79,366,380 (GRCm39) |
V26A |
possibly damaging |
Het |
Prdm10 |
T |
G |
9: 31,241,119 (GRCm39) |
Y302* |
probably null |
Het |
Prdm8 |
A |
G |
5: 98,332,471 (GRCm39) |
E124G |
probably damaging |
Het |
Prg4 |
T |
G |
1: 150,331,657 (GRCm39) |
|
probably benign |
Het |
Qser1 |
A |
G |
2: 104,618,475 (GRCm39) |
V779A |
probably benign |
Het |
Rbm39 |
G |
A |
2: 156,009,504 (GRCm39) |
R123C |
probably damaging |
Het |
Ric1 |
C |
T |
19: 29,565,172 (GRCm39) |
P640S |
probably damaging |
Het |
Rpl14 |
G |
A |
9: 120,403,293 (GRCm39) |
|
probably benign |
Het |
Rsl1d1 |
T |
A |
16: 11,011,558 (GRCm39) |
D382V |
probably benign |
Het |
Rubcn |
G |
T |
16: 32,688,514 (GRCm39) |
|
probably benign |
Het |
Sec16a |
G |
A |
2: 26,320,498 (GRCm39) |
R1361C |
probably damaging |
Het |
Slc26a11 |
T |
G |
11: 119,247,798 (GRCm39) |
V41G |
probably damaging |
Het |
Slc41a2 |
A |
G |
10: 83,151,960 (GRCm39) |
F172L |
possibly damaging |
Het |
Slc4a4 |
A |
C |
5: 89,327,690 (GRCm39) |
Y674S |
probably damaging |
Het |
Spata31e3 |
A |
T |
13: 50,401,007 (GRCm39) |
Y440N |
possibly damaging |
Het |
Strc |
A |
C |
2: 121,208,495 (GRCm39) |
M292R |
probably benign |
Het |
Syde2 |
A |
G |
3: 145,694,381 (GRCm39) |
T210A |
probably benign |
Het |
Tcf7l2 |
C |
A |
19: 55,743,480 (GRCm39) |
A97E |
probably benign |
Het |
Tenm3 |
C |
T |
8: 48,689,474 (GRCm39) |
D2038N |
probably damaging |
Het |
Tepsin |
G |
A |
11: 119,986,190 (GRCm39) |
T168M |
probably damaging |
Het |
Tex15 |
A |
T |
8: 34,047,456 (GRCm39) |
M178L |
probably benign |
Het |
Tgfbr2 |
T |
C |
9: 115,939,119 (GRCm39) |
N236S |
probably damaging |
Het |
Tnrc18 |
A |
G |
5: 142,713,744 (GRCm39) |
V2531A |
probably damaging |
Het |
Ttn |
T |
G |
2: 76,725,767 (GRCm39) |
|
probably benign |
Het |
Tubgcp3 |
G |
T |
8: 12,687,000 (GRCm39) |
D630E |
probably damaging |
Het |
Ubr4 |
G |
A |
4: 139,133,839 (GRCm39) |
W745* |
probably null |
Het |
Vmn2r38 |
T |
A |
7: 9,078,340 (GRCm39) |
K681* |
probably null |
Het |
Xrcc6 |
A |
G |
15: 81,915,375 (GRCm39) |
K98E |
probably benign |
Het |
Zfp423 |
A |
G |
8: 88,530,407 (GRCm39) |
V13A |
probably benign |
Het |
Zfp512b |
A |
G |
2: 181,228,141 (GRCm39) |
I5T |
possibly damaging |
Het |
Zmynd8 |
C |
T |
2: 165,717,670 (GRCm39) |
E14K |
probably damaging |
Het |
|
Other mutations in Vmn2r115 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00990:Vmn2r115
|
APN |
17 |
23,575,934 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,345 (GRCm39) |
nonsense |
probably null |
|
IGL00990:Vmn2r115
|
APN |
17 |
23,578,371 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,135 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,252 (GRCm39) |
missense |
probably benign |
0.14 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,313 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,578,323 (GRCm39) |
missense |
probably benign |
0.22 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,150 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,180 (GRCm39) |
missense |
possibly damaging |
0.90 |
IGL00990:Vmn2r115
|
APN |
17 |
23,567,008 (GRCm39) |
nonsense |
probably null |
|
IGL00990:Vmn2r115
|
APN |
17 |
23,578,798 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,578,753 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,238 (GRCm39) |
missense |
probably benign |
0.19 |
IGL00990:Vmn2r115
|
APN |
17 |
23,565,346 (GRCm39) |
missense |
probably benign |
0.30 |
IGL01073:Vmn2r115
|
APN |
17 |
23,564,971 (GRCm39) |
missense |
probably benign |
0.12 |
IGL01101:Vmn2r115
|
APN |
17 |
23,564,971 (GRCm39) |
missense |
probably benign |
0.12 |
IGL01300:Vmn2r115
|
APN |
17 |
23,578,755 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01415:Vmn2r115
|
APN |
17 |
23,578,755 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02309:Vmn2r115
|
APN |
17 |
23,564,113 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02863:Vmn2r115
|
APN |
17 |
23,578,257 (GRCm39) |
missense |
probably damaging |
0.97 |
R0023:Vmn2r115
|
UTSW |
17 |
23,565,252 (GRCm39) |
missense |
probably benign |
0.14 |
R0197:Vmn2r115
|
UTSW |
17 |
23,578,755 (GRCm39) |
missense |
probably damaging |
1.00 |
R0361:Vmn2r115
|
UTSW |
17 |
23,564,196 (GRCm39) |
missense |
probably benign |
0.11 |
R0601:Vmn2r115
|
UTSW |
17 |
23,579,074 (GRCm39) |
missense |
probably null |
0.51 |
R0676:Vmn2r115
|
UTSW |
17 |
23,565,238 (GRCm39) |
missense |
probably benign |
0.19 |
R0685:Vmn2r115
|
UTSW |
17 |
23,578,249 (GRCm39) |
missense |
probably benign |
|
R0865:Vmn2r115
|
UTSW |
17 |
23,565,382 (GRCm39) |
missense |
possibly damaging |
0.65 |
R1124:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1145:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1146:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1207:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1266:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1318:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1367:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1376:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1376:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1420:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1469:Vmn2r115
|
UTSW |
17 |
23,564,992 (GRCm39) |
missense |
probably damaging |
0.99 |
R1469:Vmn2r115
|
UTSW |
17 |
23,564,992 (GRCm39) |
missense |
probably damaging |
0.99 |
R1604:Vmn2r115
|
UTSW |
17 |
23,564,245 (GRCm39) |
missense |
probably benign |
0.12 |
R1645:Vmn2r115
|
UTSW |
17 |
23,565,192 (GRCm39) |
missense |
possibly damaging |
0.69 |
R1646:Vmn2r115
|
UTSW |
17 |
23,578,513 (GRCm39) |
missense |
probably damaging |
1.00 |
R1650:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1678:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1716:Vmn2r115
|
UTSW |
17 |
23,566,795 (GRCm39) |
missense |
probably benign |
|
R1846:Vmn2r115
|
UTSW |
17 |
23,578,357 (GRCm39) |
missense |
probably damaging |
1.00 |
R1847:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1885:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R1887:Vmn2r115
|
UTSW |
17 |
23,565,007 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1937:Vmn2r115
|
UTSW |
17 |
23,578,388 (GRCm39) |
missense |
probably damaging |
1.00 |
R2007:Vmn2r115
|
UTSW |
17 |
23,566,927 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2120:Vmn2r115
|
UTSW |
17 |
23,578,297 (GRCm39) |
missense |
probably damaging |
1.00 |
R3161:Vmn2r115
|
UTSW |
17 |
23,575,998 (GRCm39) |
missense |
possibly damaging |
0.82 |
R3780:Vmn2r115
|
UTSW |
17 |
23,564,146 (GRCm39) |
missense |
probably damaging |
1.00 |
R3806:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R3982:Vmn2r115
|
UTSW |
17 |
23,578,948 (GRCm39) |
missense |
probably damaging |
1.00 |
R4019:Vmn2r115
|
UTSW |
17 |
23,579,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R4039:Vmn2r115
|
UTSW |
17 |
23,564,077 (GRCm39) |
missense |
probably benign |
0.26 |
R4087:Vmn2r115
|
UTSW |
17 |
23,565,358 (GRCm39) |
missense |
probably benign |
0.35 |
R4089:Vmn2r115
|
UTSW |
17 |
23,565,358 (GRCm39) |
missense |
probably benign |
0.35 |
R4379:Vmn2r115
|
UTSW |
17 |
23,564,197 (GRCm39) |
missense |
possibly damaging |
0.95 |
R4417:Vmn2r115
|
UTSW |
17 |
23,564,854 (GRCm39) |
missense |
probably benign |
0.02 |
R4601:Vmn2r115
|
UTSW |
17 |
23,565,373 (GRCm39) |
missense |
probably benign |
0.01 |
R4874:Vmn2r115
|
UTSW |
17 |
23,578,825 (GRCm39) |
missense |
probably damaging |
1.00 |
R5466:Vmn2r115
|
UTSW |
17 |
23,579,030 (GRCm39) |
missense |
probably damaging |
1.00 |
R5613:Vmn2r115
|
UTSW |
17 |
23,564,307 (GRCm39) |
missense |
probably benign |
|
R5821:Vmn2r115
|
UTSW |
17 |
23,566,937 (GRCm39) |
missense |
probably damaging |
0.99 |
R6120:Vmn2r115
|
UTSW |
17 |
23,565,003 (GRCm39) |
missense |
probably damaging |
1.00 |
R6193:Vmn2r115
|
UTSW |
17 |
23,575,983 (GRCm39) |
missense |
probably benign |
0.01 |
R6213:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R6290:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
R6319:Vmn2r115
|
UTSW |
17 |
23,566,877 (GRCm39) |
missense |
possibly damaging |
0.70 |
R6495:Vmn2r115
|
UTSW |
17 |
23,578,572 (GRCm39) |
missense |
probably benign |
0.02 |
R6599:Vmn2r115
|
UTSW |
17 |
23,565,006 (GRCm39) |
missense |
probably benign |
0.00 |
R6764:Vmn2r115
|
UTSW |
17 |
23,565,046 (GRCm39) |
missense |
probably damaging |
1.00 |
R7023:Vmn2r115
|
UTSW |
17 |
23,578,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R7236:Vmn2r115
|
UTSW |
17 |
23,578,576 (GRCm39) |
missense |
probably benign |
0.01 |
R7353:Vmn2r115
|
UTSW |
17 |
23,564,887 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7483:Vmn2r115
|
UTSW |
17 |
23,565,371 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7743:Vmn2r115
|
UTSW |
17 |
23,564,772 (GRCm39) |
nonsense |
probably null |
|
R8005:Vmn2r115
|
UTSW |
17 |
23,563,124 (GRCm39) |
nonsense |
probably null |
|
R8191:Vmn2r115
|
UTSW |
17 |
23,578,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R8544:Vmn2r115
|
UTSW |
17 |
23,564,773 (GRCm39) |
missense |
possibly damaging |
0.88 |
R8890:Vmn2r115
|
UTSW |
17 |
23,578,497 (GRCm39) |
missense |
probably damaging |
0.98 |
R9098:Vmn2r115
|
UTSW |
17 |
23,564,803 (GRCm39) |
missense |
probably benign |
|
R9114:Vmn2r115
|
UTSW |
17 |
23,564,307 (GRCm39) |
missense |
probably benign |
|
R9189:Vmn2r115
|
UTSW |
17 |
23,564,784 (GRCm39) |
missense |
probably damaging |
1.00 |
R9351:Vmn2r115
|
UTSW |
17 |
23,578,482 (GRCm39) |
missense |
probably benign |
0.05 |
R9397:Vmn2r115
|
UTSW |
17 |
23,564,152 (GRCm39) |
nonsense |
probably null |
|
R9410:Vmn2r115
|
UTSW |
17 |
23,578,915 (GRCm39) |
missense |
possibly damaging |
0.67 |
R9593:Vmn2r115
|
UTSW |
17 |
23,578,184 (GRCm39) |
missense |
probably damaging |
0.99 |
V5622:Vmn2r115
|
UTSW |
17 |
23,578,333 (GRCm39) |
missense |
probably benign |
|
V5622:Vmn2r115
|
UTSW |
17 |
23,565,201 (GRCm39) |
missense |
probably damaging |
1.00 |
X0023:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
X0033:Vmn2r115
|
UTSW |
17 |
23,578,962 (GRCm39) |
small deletion |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- GGTCATCTCAGACAATGATCAAGG -3'
(R):5'- ACTCATCTGGGCATTTGACAG -3'
Sequencing Primer
(F):5'- TCTCAGACAATGATCAAGGTATCC -3'
(R):5'- TGACAGAGTTCAATGTCTGGAC -3'
|
Posted On |
2018-11-28 |