Mutagenetix > Incidental Mutations

Incidental Mutation 'R6988:Vmn1r181'

543079

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r181

Ensembl Gene

ENSMUSG00000097425

Gene Name

vomeronasal 1 receptor 181

Synonyms

V1rd20

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.052) question?

Stock #

R6988 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

23974615-23988139 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 23984847 bp

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 246 (F246L)

Ref Sequence

ENSEMBL: ENSMUSP00000154403 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000181796] [ENSMUST00000226843] [ENSMUST00000226978] [ENSMUST00000227637] [ENSMUST00000228399] [ENSMUST00000228842]

Predicted Effect

probably damaging
Transcript: ENSMUST00000181796
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000137685
Gene: ENSMUSG00000097425
AA Change: F246L

Domain	Start	End	E-Value	Type
Pfam:TAS2R	8	296	3.9e-9	PFAM
Pfam:V1R	41	295	2.7e-13	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000226843
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

probably damaging
Transcript: ENSMUST00000226978
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

probably damaging
Transcript: ENSMUST00000227637
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

probably damaging
Transcript: ENSMUST00000228399
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

probably damaging
Transcript: ENSMUST00000228842
AA Change: F246L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.2%
20x: 97.2%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700013G24Rik	T	G	4: 137,454,579	L15W	probably damaging	Het
4930550C14Rik	G	A	9: 53,411,756	V31I	possibly damaging	Het
4932415D10Rik	T	C	10: 82,291,899	D1759G	possibly damaging	Het
Adgre1	C	T	17: 57,408,445	S255F	probably benign	Het
Aff4	T	G	11: 53,398,237	S404R	probably damaging	Het
Akr1c19	A	T	13: 4,233,758		probably benign	Het
Ankrd31	T	A	13: 96,878,249	I1342K	probably damaging	Het
Arhgap5	T	A	12: 52,518,125	D626E	possibly damaging	Het
Arhgef1	G	A	7: 24,916,923	V332I	probably benign	Het
AY358078	A	G	14: 51,826,187	E430G	probably damaging	Het
B4gat1	T	A	19: 5,040,434	I395N	probably benign	Het
Bub1b	T	A	2: 118,636,830	I878N	probably damaging	Het
Ccdc150	C	T	1: 54,355,709	Q745*	probably null	Het
Ccl19	A	T	4: 42,754,885	I87N	probably damaging	Het
Ces2g	G	C	8: 104,963,908	G107A	probably benign	Het
Chpt1	A	G	10: 88,488,406	V180A	probably damaging	Het
Col2a1	T	C	15: 98,004,454	T14A	unknown	Het
Dnah7a	T	C	1: 53,582,625	I1114V	possibly damaging	Het
Dnah7c	T	C	1: 46,666,213	I2462T	possibly damaging	Het
Dnah8	T	C	17: 30,643,275	F208S	probably damaging	Het
Dnhd1	A	G	7: 105,714,210	E3993G	probably damaging	Het
Erv3	C	T	2: 131,855,966	D158N	possibly damaging	Het
Exoc6	T	A	19: 37,609,091	F647I	probably damaging	Het
Fbrs	G	A	7: 127,479,508		probably benign	Het
Fgfr1op2	T	C	6: 146,589,965	F109L	probably damaging	Het
Fv1	T	C	4: 147,869,271	F98S	possibly damaging	Het
Gm436	A	G	4: 144,686,325	F15S	probably benign	Het
H2-M10.1	T	C	17: 36,325,592	K107E	probably benign	Het
Hspg2	A	T	4: 137,528,890	Q1436L	probably damaging	Het
Ighv1-74	T	C	12: 115,802,763	Y79C	probably damaging	Het
Kcnj1	G	A	9: 32,396,585	V102I	probably benign	Het
Mnt	C	A	11: 74,842,809		probably benign	Het
Mrpl15	T	C	1: 4,782,660	T112A	probably benign	Het
Ncdn	T	C	4: 126,747,189	D506G	probably benign	Het
Ogdh	C	T	11: 6,313,806	R81*	probably null	Het
Olfr791	T	A	10: 129,526,673	S149T	probably benign	Het
Olfr815	G	C	10: 129,902,409	F100L	probably damaging	Het
Pole	G	T	5: 110,329,583	V1863F	probably damaging	Het
Pramel5	T	C	4: 144,274,007		probably benign	Het
Rabep1	A	G	11: 70,934,537	K636E	probably damaging	Het
Rasgrf2	T	A	13: 91,885,635	Y1151F	probably benign	Het
Rrad	A	G	8: 104,630,636	V93A	probably damaging	Het
Sesn3	A	T	9: 14,310,257	R118*	probably null	Het
Slc27a3	T	C	3: 90,386,290	N596S	probably benign	Het
Snx19	C	A	9: 30,428,935	D456E	probably damaging	Het
Supt20	T	C	3: 54,698,597	S35P	probably damaging	Het
Syde2	G	T	3: 146,019,809	R885L	probably benign	Het
Synm	G	A	7: 67,733,658	L1419F	probably damaging	Het
Tcrg-V6	G	T	13: 19,190,644	G40W	possibly damaging	Het
Tekt2	A	G	4: 126,323,443	F221L	probably benign	Het
Ticam1	C	T	17: 56,269,900	E732K	probably benign	Het
Tmem39b	A	G	4: 129,693,148	I90T	possibly damaging	Het
Trib2	A	G	12: 15,815,338	S79P	probably damaging	Het
Usp32	T	C	11: 85,010,143	M1084V	probably benign	Het
Wnt16	A	G	6: 22,288,511	D2G	probably damaging	Het
Zfp462	A	G	4: 55,080,716	E1357G	probably benign	Het
Zhx3	A	G	2: 160,779,868	M793T	probably benign	Het

Other mutations in Vmn1r181

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01443:Vmn1r181	APN	7	23984581	missense	possibly damaging	0.91
IGL02055:Vmn1r181	APN	7	23984553	missense	probably damaging	1.00
IGL02444:Vmn1r181	APN	7	23984523	missense	probably damaging	1.00
IGL03012:Vmn1r181	APN	7	23984602	missense	probably damaging	0.98
IGL03026:Vmn1r181	APN	7	23984575	missense	possibly damaging	0.94
R0255:Vmn1r181	UTSW	7	23984334	missense	probably benign	0.02
R1481:Vmn1r181	UTSW	7	23984712	missense	probably damaging	1.00
R2847:Vmn1r181	UTSW	7	23984518	missense	possibly damaging	0.88
R2848:Vmn1r181	UTSW	7	23984518	missense	possibly damaging	0.88
R2849:Vmn1r181	UTSW	7	23984518	missense	possibly damaging	0.88
R3441:Vmn1r181	UTSW	7	23984883	missense	probably benign	0.05
R3757:Vmn1r181	UTSW	7	23984484	missense	possibly damaging	0.90
R3945:Vmn1r181	UTSW	7	23984152	missense	probably damaging	0.98
R3983:Vmn1r181	UTSW	7	23984809	missense	probably benign	0.23
R4780:Vmn1r181	UTSW	7	23984583	missense	possibly damaging	0.64
R4999:Vmn1r181	UTSW	7	23984365	missense	probably damaging	0.99
R5463:Vmn1r181	UTSW	7	23984362	missense	probably benign	0.02
R5672:Vmn1r181	UTSW	7	23984316	missense	probably damaging	1.00
R6229:Vmn1r181	UTSW	7	23984155	missense	probably damaging	1.00
R6315:Vmn1r181	UTSW	7	23984758	missense	probably benign	0.23
R6316:Vmn1r181	UTSW	7	23984758	missense	probably benign	0.23
R6317:Vmn1r181	UTSW	7	23984758	missense	probably benign	0.23
R6324:Vmn1r181	UTSW	7	23984758	missense	probably benign	0.23
R6326:Vmn1r181	UTSW	7	23984758	missense	probably benign	0.23
R7446:Vmn1r181	UTSW	7	23984931	missense	probably benign	0.01
R7972:Vmn1r181	UTSW	7	23984446	missense	probably benign	0.30
R8465:Vmn1r181	UTSW	7	23984884	missense	possibly damaging	0.65
X0067:Vmn1r181	UTSW	7	23984901	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- CTTGCGATTTGCCCATGATGC -3'
(R):5'- TAAAGCTGTCTTCTGTGCTCAG -3'

Sequencing Primer
(F):5'- GCCCATGATGCCACATTCATGAG -3'
(R):5'- AGTGACTCTGGCTTTCAACAG -3'

Posted On

2018-11-28