Incidental Mutation 'R6747:Col11a1'
| ID |
543568 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Col11a1
|
| Ensembl Gene |
ENSMUSG00000027966 |
| Gene Name |
collagen, type XI, alpha 1 |
| Synonyms |
C530001D20Rik |
| MMRRC Submission |
044864-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably essential
(E-score: 0.939)
|
| Stock # |
R6747 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
3 |
| Chromosomal Location |
113824189-114014367 bp(+) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
C to T
at 114006099 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glutamine to Stop codon
at position 534
(Q534*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000138879
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000092155]
[ENSMUST00000184978]
|
| AlphaFold |
Q61245 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000092155
|
| SMART Domains |
Protein: ENSMUSP00000089793
Gene: ENSMUSG00000027966
| Domain | Start | End | E-Value | Type |
|---|
|
TSPN
|
37 |
228 |
1.83e-62 |
SMART |
|
LamG
|
96 |
227 |
5.87e-11 |
SMART |
|
low complexity region
|
256 |
276 |
N/A |
INTRINSIC |
|
internal_repeat_4
|
357 |
431 |
3.12e-6 |
PROSPERO |
|
Pfam:Collagen
|
433 |
491 |
2.6e-9 |
PFAM |
|
Pfam:Collagen
|
525 |
586 |
5.9e-9 |
PFAM |
|
low complexity region
|
611 |
632 |
N/A |
INTRINSIC |
|
low complexity region
|
638 |
677 |
N/A |
INTRINSIC |
|
Pfam:Collagen
|
721 |
805 |
3.6e-8 |
PFAM |
|
internal_repeat_3
|
814 |
854 |
3.55e-9 |
PROSPERO |
|
internal_repeat_1
|
818 |
869 |
2.01e-16 |
PROSPERO |
|
low complexity region
|
872 |
944 |
N/A |
INTRINSIC |
|
low complexity region
|
952 |
1001 |
N/A |
INTRINSIC |
|
low complexity region
|
1031 |
1059 |
N/A |
INTRINSIC |
|
low complexity region
|
1066 |
1100 |
N/A |
INTRINSIC |
|
low complexity region
|
1103 |
1121 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
1124 |
1188 |
2.4e-12 |
PROSPERO |
|
low complexity region
|
1189 |
1205 |
N/A |
INTRINSIC |
|
low complexity region
|
1211 |
1232 |
N/A |
INTRINSIC |
|
low complexity region
|
1235 |
1250 |
N/A |
INTRINSIC |
|
low complexity region
|
1252 |
1368 |
N/A |
INTRINSIC |
|
low complexity region
|
1373 |
1392 |
N/A |
INTRINSIC |
|
low complexity region
|
1417 |
1448 |
N/A |
INTRINSIC |
|
low complexity region
|
1453 |
1463 |
N/A |
INTRINSIC |
|
Pfam:Collagen
|
1481 |
1543 |
8.3e-9 |
PFAM |
|
COLFI
|
1574 |
1803 |
7.28e-127 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000184978
AA Change: Q534*
|
| SMART Domains |
Protein: ENSMUSP00000138879
Gene: ENSMUSG00000027966
AA Change: Q534*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Collagen
|
1 |
57 |
6.3e-10 |
PFAM |
|
Pfam:Collagen
|
49 |
110 |
3.2e-10 |
PFAM |
|
Pfam:Collagen
|
95 |
165 |
6.2e-8 |
PFAM |
|
Pfam:Collagen
|
242 |
318 |
2.2e-9 |
PFAM |
|
Pfam:Collagen
|
289 |
362 |
1.6e-7 |
PFAM |
|
Pfam:Collagen
|
341 |
403 |
2e-9 |
PFAM |
|
COLFI
|
434 |
536 |
8.88e-12 |
SMART |
|
| Meta Mutation Damage Score |
0.9755 |
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.5%
- 20x: 96.0%
|
| Validation Efficiency |
97% (68/70) |
| MGI Phenotype |
FUNCTION: This gene encodes the alpha-1 subunit of type XI collagen, one of the low abundance fibrillar collagens that is essential for normal embryonic skeletal development and the cohesive properties of cartilage. The encoded protein, in association with the alpha-1 subunit of type II collagen, forms a heterotrimeric type XI procollagen that undergoes proteolytic processing. Mice lacking the encoded protein develop severe chondrodysplasia and die at birth. [provided by RefSeq, Dec 2015]
PHENOTYPE: Homozygous mutation of this gene results in perinatal lethality by asphyxia. Mutants animals display weak tracheal cartilage, short snout, short mandible, cleft palate, short limbs, and externally rotated distal portion of the hindlimbs. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 71 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca4 |
C |
T |
3: 121,919,962 (GRCm39) |
|
probably null |
Het |
| Acyp1 |
C |
T |
12: 85,325,679 (GRCm39) |
V107I |
probably null |
Het |
| Aftph |
T |
C |
11: 20,676,144 (GRCm39) |
|
probably null |
Het |
| Agtpbp1 |
A |
T |
13: 59,692,167 (GRCm39) |
|
probably null |
Het |
| Arhgap15 |
C |
A |
2: 44,006,689 (GRCm39) |
P269T |
probably damaging |
Het |
| Arhgap30 |
T |
C |
1: 171,235,297 (GRCm39) |
V557A |
probably damaging |
Het |
| Asb3 |
T |
A |
11: 31,031,493 (GRCm39) |
M410K |
probably benign |
Het |
| B4galnt2 |
T |
C |
11: 95,759,460 (GRCm39) |
|
probably null |
Het |
| Birc2 |
A |
G |
9: 7,860,262 (GRCm39) |
|
probably null |
Het |
| Cav2 |
A |
T |
6: 17,286,950 (GRCm39) |
N69Y |
probably damaging |
Het |
| Cc2d2b |
G |
A |
19: 40,784,111 (GRCm39) |
C826Y |
probably benign |
Het |
| Cenpf |
T |
A |
1: 189,385,051 (GRCm39) |
T2410S |
probably benign |
Het |
| Chchd1 |
A |
G |
14: 20,753,448 (GRCm39) |
D24G |
probably benign |
Het |
| Cmip |
G |
A |
8: 118,163,618 (GRCm39) |
G450S |
probably benign |
Het |
| Col3a1 |
G |
T |
1: 45,377,782 (GRCm39) |
|
probably benign |
Het |
| Cox4i1 |
T |
C |
8: 121,399,969 (GRCm39) |
I31T |
possibly damaging |
Het |
| Cstf3 |
G |
T |
2: 104,477,112 (GRCm39) |
V168F |
probably damaging |
Het |
| Dapk1 |
T |
C |
13: 60,873,154 (GRCm39) |
I352T |
probably benign |
Het |
| Ddx52 |
T |
C |
11: 83,846,128 (GRCm39) |
V456A |
probably damaging |
Het |
| Dmxl2 |
A |
T |
9: 54,323,372 (GRCm39) |
H1337Q |
probably damaging |
Het |
| Dnah7a |
T |
C |
1: 53,675,221 (GRCm39) |
T369A |
probably benign |
Het |
| Dppa1 |
T |
A |
11: 46,516,422 (GRCm39) |
I8F |
unknown |
Het |
| Ebf1 |
G |
T |
11: 44,774,641 (GRCm39) |
V213F |
probably damaging |
Het |
| Foxb2 |
C |
A |
19: 16,850,197 (GRCm39) |
E270* |
probably null |
Het |
| Gclc |
A |
T |
9: 77,695,527 (GRCm39) |
R450W |
probably damaging |
Het |
| Grin2d |
T |
C |
7: 45,511,692 (GRCm39) |
E251G |
probably damaging |
Het |
| Hal |
A |
T |
10: 93,336,539 (GRCm39) |
N423Y |
probably damaging |
Het |
| Krtap4-8 |
T |
A |
11: 99,670,917 (GRCm39) |
I185F |
unknown |
Het |
| Lrp3 |
T |
A |
7: 34,910,862 (GRCm39) |
Q61L |
probably benign |
Het |
| Met |
A |
C |
6: 17,571,466 (GRCm39) |
Q1296H |
probably damaging |
Het |
| Mphosph9 |
T |
A |
5: 124,435,762 (GRCm39) |
N557I |
possibly damaging |
Het |
| Mrpl46 |
C |
A |
7: 78,432,729 (GRCm39) |
W16C |
probably benign |
Het |
| Myh13 |
G |
A |
11: 67,241,245 (GRCm39) |
R874Q |
probably damaging |
Het |
| Nelfb |
G |
A |
2: 25,093,393 (GRCm39) |
T453I |
probably benign |
Het |
| Nos2 |
A |
G |
11: 78,843,780 (GRCm39) |
D909G |
probably damaging |
Het |
| Nr5a2 |
T |
C |
1: 136,810,082 (GRCm39) |
E431G |
possibly damaging |
Het |
| Nsmce2 |
A |
G |
15: 59,463,573 (GRCm39) |
D149G |
probably benign |
Het |
| Or52b1 |
C |
T |
7: 104,979,234 (GRCm39) |
R55H |
probably benign |
Het |
| Or5ac21 |
T |
C |
16: 59,124,004 (GRCm39) |
F164L |
probably benign |
Het |
| Pcbp4 |
C |
A |
9: 106,337,847 (GRCm39) |
|
probably null |
Het |
| Peg10 |
A |
G |
6: 4,757,137 (GRCm39) |
|
probably benign |
Het |
| Pms2 |
C |
T |
5: 143,862,237 (GRCm39) |
P154L |
probably benign |
Het |
| Pou6f2 |
A |
C |
13: 18,303,772 (GRCm39) |
L112R |
probably benign |
Het |
| Pramel30 |
T |
C |
4: 144,059,548 (GRCm39) |
W420R |
probably benign |
Het |
| Prdm6 |
A |
T |
18: 53,598,118 (GRCm39) |
|
probably benign |
Het |
| Prob1 |
G |
A |
18: 35,788,207 (GRCm39) |
R12W |
probably damaging |
Het |
| Rif1 |
T |
A |
2: 51,968,275 (GRCm39) |
|
probably null |
Het |
| Rpl9-ps6 |
A |
G |
19: 32,443,543 (GRCm39) |
S137P |
probably benign |
Het |
| Rsf1 |
GGCG |
GGCGACGGCAGCG |
7: 97,229,113 (GRCm39) |
|
probably benign |
Homo |
| Sec23ip |
A |
G |
7: 128,354,573 (GRCm39) |
|
silent |
Het |
| Slc38a9 |
T |
C |
13: 112,826,714 (GRCm39) |
C151R |
probably benign |
Het |
| Slc39a8 |
T |
C |
3: 135,554,941 (GRCm39) |
|
probably null |
Het |
| Slc6a18 |
C |
A |
13: 73,826,110 (GRCm39) |
|
probably benign |
Het |
| Snw1 |
T |
C |
12: 87,511,480 (GRCm39) |
D57G |
probably damaging |
Het |
| Sox6 |
C |
G |
7: 115,140,966 (GRCm39) |
R505P |
probably damaging |
Het |
| Speg |
T |
C |
1: 75,387,039 (GRCm39) |
|
probably null |
Het |
| Spire2 |
C |
T |
8: 124,083,585 (GRCm39) |
R190C |
probably damaging |
Het |
| Stard9 |
A |
C |
2: 120,528,864 (GRCm39) |
H1707P |
possibly damaging |
Het |
| Tenm3 |
G |
T |
8: 48,796,278 (GRCm39) |
T237K |
probably damaging |
Het |
| Themis2 |
T |
A |
4: 132,523,573 (GRCm39) |
E31V |
possibly damaging |
Het |
| Trim56 |
T |
G |
5: 137,143,375 (GRCm39) |
Q47P |
probably damaging |
Het |
| Trim58 |
T |
C |
11: 58,542,090 (GRCm39) |
I350T |
probably benign |
Het |
| Ttll7 |
C |
T |
3: 146,649,811 (GRCm39) |
P639S |
probably benign |
Het |
| Ubxn6 |
A |
G |
17: 56,377,650 (GRCm39) |
|
probably null |
Het |
| Vmn2r114 |
A |
T |
17: 23,528,850 (GRCm39) |
F417L |
probably benign |
Het |
| Vmn2r29 |
T |
A |
7: 7,234,421 (GRCm39) |
M822L |
probably benign |
Het |
| Vps9d1 |
T |
C |
8: 123,980,746 (GRCm39) |
D27G |
probably damaging |
Het |
| Wdr3 |
C |
T |
3: 100,046,040 (GRCm39) |
R931Q |
probably damaging |
Het |
| Whamm |
G |
A |
7: 81,228,050 (GRCm39) |
|
probably null |
Het |
| Zcchc24 |
T |
C |
14: 25,757,457 (GRCm39) |
H142R |
probably damaging |
Het |
| Zfp292 |
T |
C |
4: 34,806,894 (GRCm39) |
K2050R |
probably damaging |
Het |
|
| Other mutations in Col11a1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00474:Col11a1
|
APN |
3 |
113,860,182 (GRCm39) |
missense |
unknown |
|
|
IGL00578:Col11a1
|
APN |
3 |
113,987,755 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL00742:Col11a1
|
APN |
3 |
113,917,964 (GRCm39) |
missense |
unknown |
|
|
IGL01014:Col11a1
|
APN |
3 |
113,917,458 (GRCm39) |
splice site |
probably benign |
|
|
IGL01099:Col11a1
|
APN |
3 |
113,905,690 (GRCm39) |
nonsense |
probably null |
|
|
IGL01129:Col11a1
|
APN |
3 |
113,979,522 (GRCm39) |
splice site |
probably benign |
|
|
IGL01474:Col11a1
|
APN |
3 |
114,010,783 (GRCm39) |
utr 3 prime |
probably benign |
|
|
IGL01884:Col11a1
|
APN |
3 |
113,860,191 (GRCm39) |
missense |
unknown |
|
|
IGL02104:Col11a1
|
APN |
3 |
113,975,046 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL02715:Col11a1
|
APN |
3 |
113,923,058 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL02978:Col11a1
|
APN |
3 |
113,855,211 (GRCm39) |
missense |
unknown |
|
|
IGL03203:Col11a1
|
APN |
3 |
114,005,733 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
IGL03240:Col11a1
|
APN |
3 |
114,010,859 (GRCm39) |
splice site |
probably null |
|
|
IGL03357:Col11a1
|
APN |
3 |
113,987,740 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03390:Col11a1
|
APN |
3 |
113,883,902 (GRCm39) |
missense |
unknown |
|
|
gluon
|
UTSW |
3 |
114,010,819 (GRCm39) |
utr 3 prime |
probably benign |
|
|
uncovered
|
UTSW |
3 |
113,906,116 (GRCm39) |
unclassified |
probably benign |
|
|
weakforce
|
UTSW |
3 |
113,907,249 (GRCm39) |
missense |
unknown |
|
|
R0110:Col11a1
|
UTSW |
3 |
113,899,105 (GRCm39) |
splice site |
probably benign |
|
|
R0144:Col11a1
|
UTSW |
3 |
113,907,243 (GRCm39) |
missense |
unknown |
|
|
R0432:Col11a1
|
UTSW |
3 |
113,999,550 (GRCm39) |
splice site |
probably benign |
|
|
R0468:Col11a1
|
UTSW |
3 |
114,010,707 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R0510:Col11a1
|
UTSW |
3 |
113,899,105 (GRCm39) |
splice site |
probably benign |
|
|
R0535:Col11a1
|
UTSW |
3 |
113,855,184 (GRCm39) |
missense |
unknown |
|
|
R0608:Col11a1
|
UTSW |
3 |
114,012,364 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R0826:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R0827:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R0862:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R0863:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R0926:Col11a1
|
UTSW |
3 |
113,883,829 (GRCm39) |
missense |
unknown |
|
|
R0980:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R0981:Col11a1
|
UTSW |
3 |
113,932,414 (GRCm39) |
missense |
unknown |
|
|
R1004:Col11a1
|
UTSW |
3 |
113,888,671 (GRCm39) |
splice site |
probably benign |
|
|
R1037:Col11a1
|
UTSW |
3 |
113,987,801 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1171:Col11a1
|
UTSW |
3 |
113,860,213 (GRCm39) |
missense |
unknown |
|
|
R1316:Col11a1
|
UTSW |
3 |
113,932,619 (GRCm39) |
splice site |
probably null |
|
|
R1324:Col11a1
|
UTSW |
3 |
113,824,565 (GRCm39) |
missense |
unknown |
|
|
R1338:Col11a1
|
UTSW |
3 |
114,010,644 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R1513:Col11a1
|
UTSW |
3 |
113,890,803 (GRCm39) |
missense |
unknown |
|
|
R1528:Col11a1
|
UTSW |
3 |
114,010,644 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R1567:Col11a1
|
UTSW |
3 |
113,932,261 (GRCm39) |
missense |
unknown |
|
|
R1596:Col11a1
|
UTSW |
3 |
113,946,262 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R1605:Col11a1
|
UTSW |
3 |
113,925,290 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1624:Col11a1
|
UTSW |
3 |
113,951,804 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1626:Col11a1
|
UTSW |
3 |
113,925,218 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1666:Col11a1
|
UTSW |
3 |
113,855,184 (GRCm39) |
missense |
unknown |
|
|
R1806:Col11a1
|
UTSW |
3 |
113,951,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2001:Col11a1
|
UTSW |
3 |
113,958,942 (GRCm39) |
splice site |
probably null |
|
|
R2084:Col11a1
|
UTSW |
3 |
113,951,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2085:Col11a1
|
UTSW |
3 |
113,951,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3926:Col11a1
|
UTSW |
3 |
113,883,773 (GRCm39) |
splice site |
probably benign |
|
|
R3950:Col11a1
|
UTSW |
3 |
113,915,094 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3970:Col11a1
|
UTSW |
3 |
113,890,838 (GRCm39) |
missense |
unknown |
|
|
R4171:Col11a1
|
UTSW |
3 |
114,001,863 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4175:Col11a1
|
UTSW |
3 |
114,001,872 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R4176:Col11a1
|
UTSW |
3 |
114,001,872 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R4413:Col11a1
|
UTSW |
3 |
113,901,965 (GRCm39) |
missense |
unknown |
|
|
R4540:Col11a1
|
UTSW |
3 |
113,890,815 (GRCm39) |
missense |
unknown |
|
|
R5210:Col11a1
|
UTSW |
3 |
113,946,806 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5250:Col11a1
|
UTSW |
3 |
114,010,819 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R5335:Col11a1
|
UTSW |
3 |
113,888,889 (GRCm39) |
missense |
unknown |
|
|
R5344:Col11a1
|
UTSW |
3 |
114,002,011 (GRCm39) |
critical splice donor site |
probably null |
|
|
R5394:Col11a1
|
UTSW |
3 |
113,987,833 (GRCm39) |
splice site |
probably null |
|
|
R5687:Col11a1
|
UTSW |
3 |
114,010,752 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R5708:Col11a1
|
UTSW |
3 |
113,890,743 (GRCm39) |
missense |
unknown |
|
|
R5763:Col11a1
|
UTSW |
3 |
113,888,245 (GRCm39) |
intron |
probably benign |
|
|
R5792:Col11a1
|
UTSW |
3 |
113,925,242 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6259:Col11a1
|
UTSW |
3 |
113,932,096 (GRCm39) |
missense |
probably benign |
|
|
R6679:Col11a1
|
UTSW |
3 |
113,946,368 (GRCm39) |
splice site |
probably null |
|
|
R6738:Col11a1
|
UTSW |
3 |
113,906,116 (GRCm39) |
unclassified |
probably benign |
|
|
R6808:Col11a1
|
UTSW |
3 |
113,888,593 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R6861:Col11a1
|
UTSW |
3 |
113,961,141 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7201:Col11a1
|
UTSW |
3 |
113,883,806 (GRCm39) |
missense |
unknown |
|
|
R7264:Col11a1
|
UTSW |
3 |
113,979,248 (GRCm39) |
missense |
unknown |
|
|
R7393:Col11a1
|
UTSW |
3 |
113,890,755 (GRCm39) |
missense |
unknown |
|
|
R7445:Col11a1
|
UTSW |
3 |
113,987,578 (GRCm39) |
missense |
unknown |
|
|
R7479:Col11a1
|
UTSW |
3 |
113,896,218 (GRCm39) |
missense |
unknown |
|
|
R7548:Col11a1
|
UTSW |
3 |
113,917,409 (GRCm39) |
missense |
unknown |
|
|
R7683:Col11a1
|
UTSW |
3 |
113,907,385 (GRCm39) |
missense |
unknown |
|
|
R7747:Col11a1
|
UTSW |
3 |
113,896,221 (GRCm39) |
missense |
unknown |
|
|
R7809:Col11a1
|
UTSW |
3 |
113,890,835 (GRCm39) |
missense |
unknown |
|
|
R7951:Col11a1
|
UTSW |
3 |
113,888,864 (GRCm39) |
missense |
unknown |
|
|
R8057:Col11a1
|
UTSW |
3 |
113,925,263 (GRCm39) |
missense |
unknown |
|
|
R8134:Col11a1
|
UTSW |
3 |
114,012,435 (GRCm39) |
missense |
unknown |
|
|
R8139:Col11a1
|
UTSW |
3 |
113,890,698 (GRCm39) |
missense |
unknown |
|
|
R8243:Col11a1
|
UTSW |
3 |
113,855,141 (GRCm39) |
missense |
unknown |
|
|
R8324:Col11a1
|
UTSW |
3 |
113,958,059 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8346:Col11a1
|
UTSW |
3 |
114,005,818 (GRCm39) |
missense |
unknown |
|
|
R8480:Col11a1
|
UTSW |
3 |
113,975,043 (GRCm39) |
missense |
probably benign |
0.04 |
|
R9113:Col11a1
|
UTSW |
3 |
113,888,192 (GRCm39) |
nonsense |
probably null |
|
|
R9122:Col11a1
|
UTSW |
3 |
113,907,249 (GRCm39) |
missense |
unknown |
|
|
R9137:Col11a1
|
UTSW |
3 |
113,855,172 (GRCm39) |
missense |
unknown |
|
|
R9224:Col11a1
|
UTSW |
3 |
114,001,929 (GRCm39) |
missense |
unknown |
|
|
R9264:Col11a1
|
UTSW |
3 |
114,005,809 (GRCm39) |
missense |
unknown |
|
|
R9272:Col11a1
|
UTSW |
3 |
113,901,948 (GRCm39) |
nonsense |
probably null |
|
|
R9382:Col11a1
|
UTSW |
3 |
113,899,046 (GRCm39) |
missense |
unknown |
|
|
R9492:Col11a1
|
UTSW |
3 |
114,005,752 (GRCm39) |
missense |
probably benign |
0.39 |
|
RF002:Col11a1
|
UTSW |
3 |
114,010,650 (GRCm39) |
missense |
unknown |
|
|
X0018:Col11a1
|
UTSW |
3 |
113,905,882 (GRCm39) |
unclassified |
probably benign |
|
|
Z1177:Col11a1
|
UTSW |
3 |
113,958,884 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Z1177:Col11a1
|
UTSW |
3 |
113,932,570 (GRCm39) |
missense |
unknown |
|
|
| Predicted Primers |
PCR Primer
(F):5'- TGGATGTTGACAGTTCCTGCC -3'
(R):5'- CCCAAATACTGTGAGATAAGAATCAGG -3'
Sequencing Primer
(F):5'- CCTGCCATGTTTTTGCAATATTGAAC -3'
(R):5'- AAGAATCAGGGAATTTGTTTGGTGAG -3'
|
| Posted On |
2019-03-08 |
Incidental Mutation