Mutagenetix > Incidental Mutation

Incidental Mutation 'R6993:Or10d5'

543978

Institutional Source

Beutler Lab

Gene Symbol

Or10d5

Ensembl Gene

ENSMUSG00000043331

Gene Name

olfactory receptor family 10 subfamily D member 5

Synonyms

MOR224-2, GA_x6K02T2PVTD-33651220-33650288, Olfr975

MMRRC Submission

045099-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.062) question?

Stock #

R6993 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

39861133-39862065 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 39861933 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Leucine at position 45 (M45L)

Ref Sequence

ENSEMBL: ENSMUSP00000150664 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000054067] [ENSMUST00000169307] [ENSMUST00000213171] [ENSMUST00000216647] [ENSMUST00000217630]

AlphaFold

Q8VG91

Predicted Effect

probably benign
Transcript: ENSMUST00000054067
AA Change: M45L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000059776
Gene: ENSMUSG00000043331
AA Change: M45L

Domain	Start	End	E-Value	Type
Pfam:7tm_4	29	304	1.9e-51	PFAM
Pfam:7TM_GPCR_Srsx	33	249	1.8e-7	PFAM
Pfam:7tm_1	39	286	3.6e-25	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000169307

SMART Domains

Protein: ENSMUSP00000133083
Gene: ENSMUSG00000047352

Domain	Start	End	E-Value	Type
Pfam:7tm_4	43	318	1.5e-48	PFAM
Pfam:7TM_GPCR_Srsx	47	271	1.1e-5	PFAM
Pfam:7tm_1	53	300	2.8e-22	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000213171

Predicted Effect

probably benign
Transcript: ENSMUST00000216647
AA Change: M45L

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

Predicted Effect

probably benign
Transcript: ENSMUST00000217630

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

99% (66/67)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 66 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700011L22Rik	T	C	8: 79,975,053 (GRCm39)	E10G	possibly damaging	Het
Akap9	A	G	5: 4,115,866 (GRCm39)	I3429V	possibly damaging	Het
Braf	T	A	6: 39,620,097 (GRCm39)	I441F	probably damaging	Het
C5ar1	A	T	7: 15,982,837 (GRCm39)	V61E	probably damaging	Het
Camk2a	C	A	18: 61,076,247 (GRCm39)		probably benign	Het
Cd163	A	G	6: 124,294,673 (GRCm39)	Y579C	probably damaging	Het
Celf1	T	C	2: 90,840,821 (GRCm39)	Y363H	probably damaging	Het
Cntn3	T	C	6: 102,255,365 (GRCm39)	T178A	probably damaging	Het
Cryab	C	T	9: 50,664,748 (GRCm39)	P58S	probably benign	Het
Ctsf	G	T	19: 4,908,511 (GRCm39)	R290L	probably benign	Het
Ctsw	T	A	19: 5,515,865 (GRCm39)	I258F	probably damaging	Het
Dnah7b	T	C	1: 46,234,299 (GRCm39)		probably null	Het
Drg1	TCATCTTCCA	TCA	11: 3,200,294 (GRCm39)		probably null	Het
Etfb	A	G	7: 43,105,978 (GRCm39)	T172A	possibly damaging	Het
Etfdh	A	G	3: 79,519,338 (GRCm39)	Y272H	probably benign	Het
Ewsr1	C	T	11: 5,021,573 (GRCm39)	R454Q	probably benign	Het
F2rl2	T	A	13: 95,837,642 (GRCm39)	I229N	probably damaging	Het
Fam162a	A	T	16: 35,870,215 (GRCm39)	I88N	probably damaging	Het
Fastkd5	A	G	2: 130,458,459 (GRCm39)	S44P	probably benign	Het
Fat3	T	G	9: 15,830,517 (GRCm39)	S4326R	probably damaging	Het
Fbf1	T	C	11: 116,043,610 (GRCm39)	K400E	probably benign	Het
Fndc7	A	G	3: 108,783,907 (GRCm39)	V234A	probably benign	Het
Gfi1	T	A	5: 107,865,634 (GRCm39)	H481L	probably damaging	Het
Gm5591	T	A	7: 38,218,647 (GRCm39)	H742L	probably benign	Het
Golm1	ACTTCTTCT	ACTTCT	13: 59,797,390 (GRCm39)		probably benign	Het
H2-DMb1	A	C	17: 34,376,324 (GRCm39)	T148P	possibly damaging	Het
H2-T3	A	G	17: 36,497,962 (GRCm39)	L317P	probably damaging	Het
Hes3	T	C	4: 152,371,380 (GRCm39)	T190A	probably benign	Het
Hivep1	C	T	13: 42,312,190 (GRCm39)	L1477F	possibly damaging	Het
Insr	C	T	8: 3,308,752 (GRCm39)	G95S	probably damaging	Het
Irf9	A	G	14: 55,846,414 (GRCm39)	I394V	probably benign	Het
Kat2b	T	C	17: 53,945,550 (GRCm39)	L323P	probably damaging	Het
Kdr	T	C	5: 76,133,071 (GRCm39)	D69G	probably benign	Het
Krt1c	C	T	15: 101,724,395 (GRCm39)	E290K	probably damaging	Het
Krtap4-6	G	T	11: 99,556,545 (GRCm39)	R61S	unknown	Het
Ldc1	A	G	4: 130,112,106 (GRCm39)	L192P	probably damaging	Het
Lrrc27	A	T	7: 138,822,540 (GRCm39)	K477M	probably damaging	Het
Lvrn	T	C	18: 47,015,365 (GRCm39)	V579A	probably benign	Het
Malrd1	A	T	2: 16,155,602 (GRCm39)	I2004L	unknown	Het
Mast4	A	T	13: 102,872,482 (GRCm39)	N2103K	probably benign	Het
Mast4	C	T	13: 102,941,155 (GRCm39)	V301I	probably damaging	Het
Myo18a	T	A	11: 77,749,900 (GRCm39)		probably benign	Het
Or52ab2	G	T	7: 102,969,998 (GRCm39)		probably benign	Het
Pcdhga10	A	G	18: 37,882,309 (GRCm39)	Y690C	probably damaging	Het
Pdcd2	A	G	17: 15,747,343 (GRCm39)	Y65H	probably damaging	Het
Ppp1r12a	A	G	10: 108,076,698 (GRCm39)	E309G	probably benign	Het
Psmb8	A	G	17: 34,418,617 (GRCm39)	D123G	probably damaging	Het
Ptcd3	A	T	6: 71,862,299 (GRCm39)	W513R	probably damaging	Het
Ptx4	G	A	17: 25,343,898 (GRCm39)	V383I	possibly damaging	Het
Ric1	T	C	19: 29,564,013 (GRCm39)	L589S	probably damaging	Het
Rmnd5b	A	G	11: 51,515,427 (GRCm39)		probably benign	Het
Sec16a	A	T	2: 26,313,586 (GRCm39)	S1925T	probably damaging	Het
Slc16a11	T	A	11: 70,106,842 (GRCm39)	M360K	possibly damaging	Het
Slc19a2	T	A	1: 164,088,391 (GRCm39)	F79I	probably benign	Het
Slc2a6	G	T	2: 26,917,255 (GRCm39)	S45R	probably damaging	Het
Slco1a7	G	A	6: 141,711,468 (GRCm39)	T81I	possibly damaging	Het
Sppl3	T	A	5: 115,220,349 (GRCm39)	M87K	probably damaging	Het
Tbcel	A	T	9: 42,327,413 (GRCm39)	L330*	probably null	Het
Tbx5	A	T	5: 120,009,454 (GRCm39)	Y321F	possibly damaging	Het
Tenm3	C	T	8: 48,689,474 (GRCm39)	D2038N	probably damaging	Het
Tesk1	A	G	4: 43,447,006 (GRCm39)	T465A	probably benign	Het
Unc45a	A	T	7: 79,975,403 (GRCm39)	Y934N	probably damaging	Het
Unc80	A	T	1: 66,588,952 (GRCm39)	Q1039L	possibly damaging	Het
Vmn2r112	T	C	17: 22,822,195 (GRCm39)	L291P	probably benign	Het
Wwc2	A	T	8: 48,300,500 (GRCm39)	F988I	unknown	Het
Zfp947	G	A	17: 22,364,961 (GRCm39)	P238S	probably benign	Het

Other mutations in Or10d5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01480:Or10d5	APN	9	39,861,284 (GRCm39)	missense	probably benign	0.01
IGL01537:Or10d5	APN	9	39,861,921 (GRCm39)	missense	probably benign	0.00
IGL01963:Or10d5	APN	9	39,861,536 (GRCm39)	missense	probably damaging	1.00
IGL02400:Or10d5	APN	9	39,861,635 (GRCm39)	missense	probably benign
IGL03115:Or10d5	APN	9	39,862,040 (GRCm39)	missense	probably damaging	0.98
IGL03226:Or10d5	APN	9	39,861,719 (GRCm39)	splice site	probably null
R0088:Or10d5	UTSW	9	39,861,671 (GRCm39)	missense	probably benign	0.03
R0212:Or10d5	UTSW	9	39,861,236 (GRCm39)	missense	probably benign	0.44
R1668:Or10d5	UTSW	9	39,861,465 (GRCm39)	missense	possibly damaging	0.94
R1878:Or10d5	UTSW	9	39,862,053 (GRCm39)	missense	probably benign	0.35
R2225:Or10d5	UTSW	9	39,861,833 (GRCm39)	missense	possibly damaging	0.84
R2291:Or10d5	UTSW	9	39,861,630 (GRCm39)	missense	probably benign	0.19
R2420:Or10d5	UTSW	9	39,861,824 (GRCm39)	missense	possibly damaging	0.47
R2421:Or10d5	UTSW	9	39,861,824 (GRCm39)	missense	possibly damaging	0.47
R2422:Or10d5	UTSW	9	39,861,824 (GRCm39)	missense	possibly damaging	0.47
R2425:Or10d5	UTSW	9	39,861,137 (GRCm39)	missense	probably null	0.25
R2918:Or10d5	UTSW	9	39,861,660 (GRCm39)	missense	probably benign
R4536:Or10d5	UTSW	9	39,861,731 (GRCm39)	missense	probably damaging	1.00
R4709:Or10d5	UTSW	9	39,861,165 (GRCm39)	missense	probably damaging	0.97
R4831:Or10d5	UTSW	9	39,861,408 (GRCm39)	missense	probably benign	0.01
R4921:Or10d5	UTSW	9	39,861,521 (GRCm39)	missense	probably damaging	0.98
R5113:Or10d5	UTSW	9	39,861,221 (GRCm39)	missense	probably damaging	0.99
R5141:Or10d5	UTSW	9	39,861,170 (GRCm39)	missense	probably benign	0.07
R5195:Or10d5	UTSW	9	39,861,975 (GRCm39)	missense	probably benign
R5213:Or10d5	UTSW	9	39,861,389 (GRCm39)	missense	probably damaging	0.99
R5568:Or10d5	UTSW	9	39,861,983 (GRCm39)	missense	probably benign	0.05
R7080:Or10d5	UTSW	9	39,861,444 (GRCm39)	missense	probably damaging	1.00
R7436:Or10d5	UTSW	9	39,861,349 (GRCm39)	nonsense	probably null
R8178:Or10d5	UTSW	9	39,861,708 (GRCm39)	missense	probably benign	0.05
R8179:Or10d5	UTSW	9	39,861,708 (GRCm39)	missense	probably benign	0.05
R8382:Or10d5	UTSW	9	39,861,455 (GRCm39)	missense	probably benign	0.21
R8402:Or10d5	UTSW	9	39,861,713 (GRCm39)	missense	probably benign	0.39
R8511:Or10d5	UTSW	9	39,861,455 (GRCm39)	missense	probably benign	0.21
R8798:Or10d5	UTSW	9	39,862,013 (GRCm39)	missense	probably benign	0.40
R9068:Or10d5	UTSW	9	39,862,087 (GRCm39)	unclassified	probably benign

Predicted Primers

PCR Primer
(F):5'- ACGGTGTACAGGAAGCACTC -3'
(R):5'- AAGTTCAGCTAAGTGGGTCCATC -3'

Sequencing Primer
(F):5'- TCAGCACAGCCCAGGAAATG -3'
(R):5'- AGCTAAGTGGGTCCATCGTCTC -3'

Posted On

2019-05-13