Mutagenetix > Incidental Mutation

Incidental Mutation 'R7008:Zfp658'

544831

Institutional Source

Beutler Lab

Gene Symbol

Zfp658

Ensembl Gene

ENSMUSG00000056592

Gene Name

zinc finger protein 658

Synonyms

MMRRC Submission

045110-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7008 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

43211680-43224885 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 43223336 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Cysteine at position 537 (F537C)

Ref Sequence

ENSEMBL: ENSMUSP00000103606 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000005597] [ENSMUST00000107972]

AlphaFold

Q5PPQ4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000005597
AA Change: F537C

PolyPhen 2 Score 0.954 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000005597
Gene: ENSMUSG00000056592
AA Change: F537C

Domain	Start	End	E-Value	Type
KRAB	23	83	3.7e-27	SMART
ZnF_C2H2	276	295	8.84e1	SMART
ZnF_C2H2	301	323	5.81e-2	SMART
ZnF_C2H2	328	350	1.5e-4	SMART
ZnF_C2H2	356	378	1.84e-4	SMART
ZnF_C2H2	384	406	3.16e-3	SMART
ZnF_C2H2	412	434	1.45e-2	SMART
ZnF_C2H2	440	462	4.87e-4	SMART
ZnF_C2H2	468	490	4.87e-4	SMART
ZnF_C2H2	496	518	6.88e-4	SMART
ZnF_C2H2	524	546	1.69e-3	SMART
ZnF_C2H2	552	574	9.73e-4	SMART
ZnF_C2H2	580	602	1.82e-3	SMART
ZnF_C2H2	608	630	3.16e-3	SMART
ZnF_C2H2	636	658	8.94e-3	SMART
ZnF_C2H2	664	686	3.74e-5	SMART
ZnF_C2H2	692	714	2.99e-4	SMART
ZnF_C2H2	720	742	5.21e-4	SMART
ZnF_C2H2	748	770	2.79e-4	SMART
ZnF_C2H2	776	798	1.58e-3	SMART
ZnF_C2H2	804	826	3.44e-4	SMART
ZnF_C2H2	832	854	5.59e-4	SMART
ZnF_C2H2	860	882	5.81e-2	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000107972
AA Change: F537C

PolyPhen 2 Score 0.954 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000103606
Gene: ENSMUSG00000056592
AA Change: F537C

Domain	Start	End	E-Value	Type
KRAB	23	83	3.7e-27	SMART
ZnF_C2H2	276	295	8.84e1	SMART
ZnF_C2H2	301	323	5.81e-2	SMART
ZnF_C2H2	328	350	1.5e-4	SMART
ZnF_C2H2	356	378	1.84e-4	SMART
ZnF_C2H2	384	406	3.16e-3	SMART
ZnF_C2H2	412	434	1.45e-2	SMART
ZnF_C2H2	440	462	4.87e-4	SMART
ZnF_C2H2	468	490	4.87e-4	SMART
ZnF_C2H2	496	518	6.88e-4	SMART
ZnF_C2H2	524	546	1.69e-3	SMART
ZnF_C2H2	552	574	9.73e-4	SMART
ZnF_C2H2	580	602	1.82e-3	SMART
ZnF_C2H2	608	630	3.16e-3	SMART
ZnF_C2H2	636	658	8.94e-3	SMART
ZnF_C2H2	664	686	3.74e-5	SMART
ZnF_C2H2	692	714	2.99e-4	SMART
ZnF_C2H2	720	742	5.21e-4	SMART
ZnF_C2H2	748	770	2.79e-4	SMART
ZnF_C2H2	776	798	1.58e-3	SMART
ZnF_C2H2	804	826	3.44e-4	SMART
ZnF_C2H2	832	854	5.59e-4	SMART
ZnF_C2H2	860	882	5.81e-2	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ankrd17	T	A	5: 90,407,955 (GRCm39)	I1421F	possibly damaging	Het
Arhgef11	C	A	3: 87,636,525 (GRCm39)	T992K	possibly damaging	Het
Arid1b	T	C	17: 5,341,254 (GRCm39)	Y853H	probably damaging	Het
Bcl10	G	T	3: 145,639,054 (GRCm39)	R232L	probably benign	Het
Best2	T	A	8: 85,739,840 (GRCm39)	I76F	possibly damaging	Het
Card11	G	C	5: 140,859,148 (GRCm39)	R1133G	probably damaging	Het
Card9	T	C	2: 26,247,811 (GRCm39)	D180G	possibly damaging	Het
Ccdc162	T	A	10: 41,428,411 (GRCm39)	E119V	probably damaging	Het
Ccdc168	T	C	1: 44,098,785 (GRCm39)	D771G	probably benign	Het
Cd2bp2	T	C	7: 126,794,567 (GRCm39)	D15G	possibly damaging	Het
Cdk7	A	C	13: 100,854,129 (GRCm39)	M120R	probably damaging	Het
Cryba4	T	A	5: 112,399,648 (GRCm39)	T2S	probably benign	Het
Cyp19a1	A	T	9: 54,100,609 (GRCm39)	M26K	probably benign	Het
Dgcr2	A	G	16: 17,662,865 (GRCm39)	S157P	probably damaging	Het
Dis3l	A	G	9: 64,217,735 (GRCm39)	F782S	possibly damaging	Het
Ephb4	T	A	5: 137,359,536 (GRCm39)	S369T	probably benign	Het
Fhad1	CGG	CG	4: 141,645,602 (GRCm39)		probably null	Het
H1f4	T	C	13: 23,806,192 (GRCm39)	K97E	probably damaging	Het
Igf2bp2	A	T	16: 21,900,582 (GRCm39)	D118E	probably benign	Het
Iqgap3	GGAGAG	GGAG	3: 88,020,078 (GRCm39)		probably null	Het
Klhl5	T	C	5: 65,300,592 (GRCm39)	S52P	probably benign	Het
Lrrc28	A	T	7: 67,245,459 (GRCm39)		probably benign	Het
Map4k4	T	G	1: 40,028,131 (GRCm39)	D317E	probably benign	Het
Maz	A	T	7: 126,623,784 (GRCm39)	C66S	probably damaging	Het
Mbd4	T	C	6: 115,827,685 (GRCm39)	T43A	possibly damaging	Het
Milr1	T	A	11: 106,642,140 (GRCm39)	S11T	probably damaging	Het
Mthfd2l	T	A	5: 91,107,587 (GRCm39)	C150S	probably damaging	Het
Nemf	A	T	12: 69,388,395 (GRCm39)	N325K	possibly damaging	Het
Nemf	C	T	12: 69,400,567 (GRCm39)		probably null	Het
Nod2	T	A	8: 89,390,285 (GRCm39)	C197*	probably null	Het
Odf2l	A	G	3: 144,838,495 (GRCm39)	K241E	probably damaging	Het
Or4z4	G	A	19: 12,076,214 (GRCm39)	T263I	possibly damaging	Het
Or5b124	A	T	19: 13,610,985 (GRCm39)	N170I	probably damaging	Het
Osbpl10	T	G	9: 114,890,916 (GRCm39)	D101E	probably damaging	Het
Osgin1	T	C	8: 120,168,233 (GRCm39)	V20A	possibly damaging	Het
Pan3	T	A	5: 147,482,503 (GRCm39)	C438S	probably damaging	Het
Plaa	A	G	4: 94,457,586 (GRCm39)	*795Q	probably null	Het
Prss35	T	C	9: 86,638,361 (GRCm39)	V377A	probably benign	Het
Rab5c	G	A	11: 100,610,789 (GRCm39)	R40C	probably damaging	Het
Rasl12	G	A	9: 65,318,151 (GRCm39)	V172M	probably damaging	Het
Rdh16f1	A	G	10: 127,626,775 (GRCm39)	H276R	probably benign	Het
Runx2	G	A	17: 45,125,079 (GRCm39)	P80L	probably damaging	Het
Sez6l	T	C	5: 112,612,561 (GRCm39)	Y460C	probably damaging	Het
Sipa1l1	T	G	12: 82,409,886 (GRCm39)	M600R	probably damaging	Het
Slc11a2	T	C	15: 100,307,205 (GRCm39)	Y92C	probably damaging	Het
Slc4a10	A	G	2: 62,117,266 (GRCm39)	T712A	probably benign	Het
Sntb1	A	T	15: 55,655,468 (GRCm39)	Y249*	probably null	Het
Spatc1	A	G	15: 76,167,923 (GRCm39)	I127M	probably benign	Het
Sting1	C	A	18: 35,868,224 (GRCm39)	R292L	probably damaging	Het
Synj1	A	T	16: 90,790,833 (GRCm39)	N109K	probably damaging	Het
Tdg	T	A	10: 82,484,475 (GRCm39)	M396K	possibly damaging	Het
Tmem252	T	C	19: 24,651,656 (GRCm39)	V75A	probably damaging	Het
Trim40	T	C	17: 37,194,868 (GRCm39)	Q142R	probably damaging	Het
Trip6	T	C	5: 137,311,228 (GRCm39)	T163A	probably damaging	Het
Ttn	T	C	2: 76,724,986 (GRCm39)		probably benign	Het
Wdr95	T	C	5: 149,535,005 (GRCm39)	L721P	probably benign	Het
Zfp385c	A	T	11: 100,521,513 (GRCm39)	D182E	probably damaging	Het
Zfp597	A	G	16: 3,683,631 (GRCm39)	F375S	probably benign	Het
Zgrf1	T	C	3: 127,355,421 (GRCm39)	F216L	probably benign	Het

Other mutations in Zfp658

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00465:Zfp658	APN	7	43,216,780 (GRCm39)	missense	probably benign	0.03
IGL00475:Zfp658	APN	7	43,223,500 (GRCm39)	missense	possibly damaging	0.68
IGL01972:Zfp658	APN	7	43,222,134 (GRCm39)	nonsense	probably null
IGL03223:Zfp658	APN	7	43,216,735 (GRCm39)	missense	possibly damaging	0.85
R0135:Zfp658	UTSW	7	43,223,019 (GRCm39)	nonsense	probably null
R1863:Zfp658	UTSW	7	43,223,323 (GRCm39)	missense	possibly damaging	0.78
R1962:Zfp658	UTSW	7	43,223,245 (GRCm39)	missense	possibly damaging	0.93
R2698:Zfp658	UTSW	7	43,222,969 (GRCm39)	missense	possibly damaging	0.53
R3781:Zfp658	UTSW	7	43,223,270 (GRCm39)	missense	probably benign
R4791:Zfp658	UTSW	7	43,223,890 (GRCm39)	missense	possibly damaging	0.93
R5392:Zfp658	UTSW	7	43,222,355 (GRCm39)	missense	probably benign	0.07
R6092:Zfp658	UTSW	7	43,223,951 (GRCm39)	missense	possibly damaging	0.73
R6594:Zfp658	UTSW	7	43,216,701 (GRCm39)	missense	possibly damaging	0.86
R7003:Zfp658	UTSW	7	43,224,172 (GRCm39)	missense	possibly damaging	0.85
R7077:Zfp658	UTSW	7	43,223,413 (GRCm39)	missense	probably benign	0.32
R7689:Zfp658	UTSW	7	43,224,102 (GRCm39)	missense	probably benign	0.00
R7793:Zfp658	UTSW	7	43,224,108 (GRCm39)	missense	possibly damaging	0.74
R7939:Zfp658	UTSW	7	43,224,301 (GRCm39)	missense	possibly damaging	0.73
R8672:Zfp658	UTSW	7	43,222,919 (GRCm39)	missense	possibly damaging	0.52
R8828:Zfp658	UTSW	7	43,222,240 (GRCm39)	missense	probably benign
R8995:Zfp658	UTSW	7	43,222,798 (GRCm39)	missense	possibly damaging	0.93
R9021:Zfp658	UTSW	7	43,223,381 (GRCm39)	missense	possibly damaging	0.71
R9259:Zfp658	UTSW	7	43,224,280 (GRCm39)	missense	probably benign	0.02
R9551:Zfp658	UTSW	7	43,222,567 (GRCm39)	missense	probably benign	0.00
R9552:Zfp658	UTSW	7	43,222,567 (GRCm39)	missense	probably benign	0.00
R9571:Zfp658	UTSW	7	43,222,139 (GRCm39)	missense	possibly damaging	0.85
Z1176:Zfp658	UTSW	7	43,222,641 (GRCm39)	missense	possibly damaging	0.72

Predicted Primers

PCR Primer
(F):5'- TCCGAGCTCAGCACTCACC -3'
(R):5'- TGAAGGTCTTCCCGCATTTT -3'

Sequencing Primer
(F):5'- CAGAGACTTCACCTGGGCAAG -3'
(R):5'- TCAGCTGTGACCTCTGAAAG -3'

Posted On

2019-05-13