Incidental Mutation 'IGL00339:Or2a20'
| ID |
5454 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or2a20
|
| Ensembl Gene |
ENSMUSG00000059411 |
| Gene Name |
olfactory receptor family 2 subfamily A member 2 |
| Synonyms |
Olfr434, GA_x6K02T2P3E9-4341246-4340281, MOR261-10 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.126)
|
| Stock # |
IGL00339
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
6 |
| Chromosomal Location |
43193849-43194814 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to G
at 43194782 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Valine
at position 312
(L312V)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149678
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000076752]
[ENSMUST00000216562]
|
| AlphaFold |
Q8VF17 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000076752
AA Change: L312V
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000076039
Gene: ENSMUSG00000059411
AA Change: L312V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
307 |
7.7e-62 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
2.1e-29 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204448
|
| SMART Domains |
Protein: ENSMUSP00000145171
Gene: ENSMUSG00000059411
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
156 |
1.2e-26 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
34 |
156 |
3.5e-6 |
PFAM |
|
Pfam:7tm_1
|
40 |
156 |
7.5e-22 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215485
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000216562
AA Change: L312V
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 38 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2700049A03Rik |
A |
G |
12: 71,213,893 (GRCm39) |
M707V |
probably benign |
Het |
| Amz2 |
A |
T |
11: 109,324,847 (GRCm39) |
I244F |
probably damaging |
Het |
| Atp4a |
T |
C |
7: 30,412,629 (GRCm39) |
C112R |
possibly damaging |
Het |
| Axin2 |
A |
G |
11: 108,814,816 (GRCm39) |
T235A |
probably benign |
Het |
| Barhl2 |
C |
T |
5: 106,603,365 (GRCm39) |
A265T |
possibly damaging |
Het |
| Brd8 |
C |
A |
18: 34,742,936 (GRCm39) |
G310* |
probably null |
Het |
| Capn11 |
A |
T |
17: 45,954,693 (GRCm39) |
I148N |
probably damaging |
Het |
| Caskin2 |
A |
G |
11: 115,694,425 (GRCm39) |
L392P |
probably benign |
Het |
| Cep72 |
C |
T |
13: 74,210,387 (GRCm39) |
|
probably benign |
Het |
| Chst11 |
A |
G |
10: 83,027,467 (GRCm39) |
Y298C |
possibly damaging |
Het |
| Cyp21a1 |
C |
T |
17: 35,023,108 (GRCm39) |
|
probably null |
Het |
| F830045P16Rik |
T |
C |
2: 129,302,449 (GRCm39) |
D381G |
probably damaging |
Het |
| Fnip2 |
T |
G |
3: 79,422,462 (GRCm39) |
H106P |
probably benign |
Het |
| Fosl1 |
T |
A |
19: 5,500,330 (GRCm39) |
I83K |
probably damaging |
Het |
| Foxk2 |
C |
T |
11: 121,190,560 (GRCm39) |
T567M |
probably damaging |
Het |
| Frmd4a |
A |
G |
2: 4,599,525 (GRCm39) |
N208S |
probably benign |
Het |
| Gm4553 |
T |
C |
7: 141,718,964 (GRCm39) |
S155G |
unknown |
Het |
| Heatr5a |
A |
T |
12: 51,935,684 (GRCm39) |
I1634N |
probably damaging |
Het |
| Hspg2 |
C |
T |
4: 137,266,506 (GRCm39) |
T1889M |
probably damaging |
Het |
| Kcnh6 |
C |
T |
11: 105,909,845 (GRCm39) |
P457S |
probably damaging |
Het |
| Kcnk18 |
G |
T |
19: 59,223,502 (GRCm39) |
A216S |
probably benign |
Het |
| Klhl42 |
A |
G |
6: 147,003,231 (GRCm39) |
Y335C |
probably damaging |
Het |
| Lrguk |
C |
T |
6: 34,020,364 (GRCm39) |
P36L |
probably damaging |
Het |
| Mmp1b |
T |
A |
9: 7,368,304 (GRCm39) |
R443S |
probably benign |
Het |
| Ncapd3 |
T |
C |
9: 26,963,649 (GRCm39) |
S501P |
probably benign |
Het |
| Neurl4 |
C |
T |
11: 69,795,413 (GRCm39) |
R422W |
probably damaging |
Het |
| Nol4 |
T |
C |
18: 22,956,469 (GRCm39) |
S311G |
probably benign |
Het |
| Oaf |
T |
C |
9: 43,135,313 (GRCm39) |
D155G |
probably damaging |
Het |
| Oas1g |
T |
A |
5: 121,024,109 (GRCm39) |
K67* |
probably null |
Het |
| Or1l4 |
T |
C |
2: 37,091,609 (GRCm39) |
S119P |
probably damaging |
Het |
| Rims2 |
C |
A |
15: 39,323,011 (GRCm39) |
T735K |
probably benign |
Het |
| Sema4f |
T |
C |
6: 82,914,155 (GRCm39) |
T68A |
probably benign |
Het |
| Snx19 |
T |
G |
9: 30,340,380 (GRCm39) |
V506G |
possibly damaging |
Het |
| Sp140 |
T |
A |
1: 85,569,543 (GRCm39) |
C107* |
probably null |
Het |
| Sspo |
G |
A |
6: 48,460,680 (GRCm39) |
|
probably benign |
Het |
| Syce1l |
T |
G |
8: 114,376,134 (GRCm39) |
L28R |
probably damaging |
Het |
| Tgm3 |
G |
A |
2: 129,880,333 (GRCm39) |
V380M |
probably damaging |
Het |
| Unc5a |
T |
A |
13: 55,143,628 (GRCm39) |
V104D |
possibly damaging |
Het |
|
| Other mutations in Or2a20 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
R0347:Or2a20
|
UTSW |
6 |
43,194,296 (GRCm39) |
missense |
probably benign |
|
|
R1099:Or2a20
|
UTSW |
6 |
43,194,558 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1147:Or2a20
|
UTSW |
6 |
43,194,146 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1147:Or2a20
|
UTSW |
6 |
43,194,146 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1353:Or2a20
|
UTSW |
6 |
43,194,624 (GRCm39) |
missense |
probably benign |
0.41 |
|
R1570:Or2a20
|
UTSW |
6 |
43,194,285 (GRCm39) |
missense |
probably benign |
|
|
R1720:Or2a20
|
UTSW |
6 |
43,194,494 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2098:Or2a20
|
UTSW |
6 |
43,194,437 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4707:Or2a20
|
UTSW |
6 |
43,193,883 (GRCm39) |
missense |
probably benign |
0.27 |
|
R4942:Or2a20
|
UTSW |
6 |
43,193,928 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5008:Or2a20
|
UTSW |
6 |
43,193,991 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5084:Or2a20
|
UTSW |
6 |
43,194,594 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6472:Or2a20
|
UTSW |
6 |
43,194,293 (GRCm39) |
missense |
probably benign |
|
|
R7592:Or2a20
|
UTSW |
6 |
43,194,179 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7756:Or2a20
|
UTSW |
6 |
43,193,950 (GRCm39) |
nonsense |
probably null |
|
|
R7784:Or2a20
|
UTSW |
6 |
43,194,322 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R8056:Or2a20
|
UTSW |
6 |
43,193,978 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9093:Or2a20
|
UTSW |
6 |
43,194,500 (GRCm39) |
missense |
probably benign |
|
|
R9193:Or2a20
|
UTSW |
6 |
43,194,086 (GRCm39) |
missense |
probably benign |
0.45 |
|
R9745:Or2a20
|
UTSW |
6 |
43,194,258 (GRCm39) |
nonsense |
probably null |
|
|
R9749:Or2a20
|
UTSW |
6 |
43,194,258 (GRCm39) |
nonsense |
probably null |
|
|
| Posted On |
2012-04-20 |
Incidental Mutation