Incidental Mutation 'R7027:Vmn1r19'
ID 546037
Institutional Source Beutler Lab
Gene Symbol Vmn1r19
Ensembl Gene ENSMUSG00000115799
Gene Name vomeronasal 1 receptor 19
Synonyms V1rc27
MMRRC Submission 045128-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.094) question?
Stock # R7027 (G1)
Quality Score 225.009
Status Validated
Chromosome 6
Chromosomal Location 57381449-57382375 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 57381475 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Stop codon at position 9 (Y9*)
Ref Sequence ENSEMBL: ENSMUSP00000087264 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089830]
AlphaFold Q8R2C7
Predicted Effect probably null
Transcript: ENSMUST00000089830
AA Change: Y9*
SMART Domains Protein: ENSMUSP00000087264
Gene: ENSMUSG00000115799
AA Change: Y9*

DomainStartEndE-ValueType
Pfam:V1R 28 293 6.6e-58 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency 98% (85/87)
Allele List at MGI
Other mutations in this stock
Total: 88 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acoxl A T 2: 127,852,003 (GRCm39) M102L probably benign Het
Adcy10 A G 1: 165,345,815 (GRCm39) E288G probably damaging Het
Agap1 A G 1: 89,816,444 (GRCm39) H748R probably benign Het
Ahsg T C 16: 22,711,007 (GRCm39) L48P probably damaging Het
Ankrd27 A G 7: 35,311,951 (GRCm39) T394A probably benign Het
Apc T G 18: 34,445,129 (GRCm39) V657G probably damaging Het
Arl2 T C 19: 6,191,119 (GRCm39) T5A probably benign Het
B020011L13Rik A G 1: 117,729,180 (GRCm39) Y229C probably benign Het
B3gnt5 T A 16: 19,588,740 (GRCm39) S320T probably damaging Het
Bach1 G A 16: 87,516,179 (GRCm39) R240Q probably benign Het
BC107364 T G 3: 96,348,057 (GRCm39) R77S unknown Het
Brox G A 1: 183,065,750 (GRCm39) P206L possibly damaging Het
Ccrl2 T C 9: 110,884,953 (GRCm39) K182E probably benign Het
Cd19 A G 7: 126,009,671 (GRCm39) V465A possibly damaging Het
Chrdl2 A T 7: 99,671,240 (GRCm39) Q126H probably damaging Het
Cnbd1 G A 4: 18,862,063 (GRCm39) P376S probably benign Het
Cobll1 A G 2: 64,919,847 (GRCm39) S1194P probably benign Het
Col6a4 T C 9: 105,944,213 (GRCm39) Y1087C probably damaging Het
Col9a2 G A 4: 120,901,216 (GRCm39) probably null Het
Cyp4v3 A G 8: 45,763,289 (GRCm39) S341P possibly damaging Het
Dnah7a T A 1: 53,670,665 (GRCm39) Y529F probably benign Het
Eif3b C T 5: 140,411,043 (GRCm39) R165W probably damaging Het
Erlec1 C A 11: 30,900,790 (GRCm39) C126F probably damaging Het
Fads2b A G 2: 85,315,871 (GRCm39) Y440H probably damaging Het
Fat2 T C 11: 55,160,259 (GRCm39) T3285A probably benign Het
Fat2 G A 11: 55,172,677 (GRCm39) R2679* probably null Het
Fbxo31 T C 8: 122,305,224 (GRCm39) T91A probably damaging Het
Fkbp5 A G 17: 28,631,037 (GRCm39) Y243H probably damaging Het
Flcn C T 11: 59,686,632 (GRCm39) V374M probably damaging Het
Fndc5 A G 4: 129,033,316 (GRCm39) M128V probably benign Het
Gal3st1 A G 11: 3,949,002 (GRCm39) D403G probably damaging Het
Garem1 T C 18: 21,263,051 (GRCm39) N588D probably benign Het
Gas1 T C 13: 60,324,047 (GRCm39) T196A probably damaging Het
Gcn1 T C 5: 115,754,605 (GRCm39) probably null Het
Gprc5d T G 6: 135,093,646 (GRCm39) Q87P probably damaging Het
Grm1 A G 10: 10,595,339 (GRCm39) L763P probably damaging Het
Hivep2 G T 10: 14,025,321 (GRCm39) K2378N probably damaging Het
Hivep2 G T 10: 14,025,322 (GRCm39) D2379Y probably damaging Het
Itgad A G 7: 127,782,161 (GRCm39) Y199C probably damaging Het
Itm2c A G 1: 85,834,206 (GRCm39) I174V probably benign Het
Khdrbs2 A G 1: 32,453,997 (GRCm39) S128G probably benign Het
Map3k9 T C 12: 81,777,398 (GRCm39) T528A probably benign Het
Mmp11 G A 10: 75,768,230 (GRCm39) probably benign Het
Mycbpap T A 11: 94,405,440 (GRCm39) I30F probably damaging Het
Nfya T C 17: 48,696,340 (GRCm39) T335A probably benign Het
Npat T A 9: 53,481,216 (GRCm39) S1008T possibly damaging Het
Or10al5 G A 17: 38,063,300 (GRCm39) C185Y probably damaging Het
Or12e10 A G 2: 87,641,060 (GRCm39) T299A possibly damaging Het
Or5p69 A T 7: 107,967,557 (GRCm39) M287L probably damaging Het
Or6c219 C T 10: 129,781,041 (GRCm39) A297T possibly damaging Het
Osbpl10 T C 9: 115,052,766 (GRCm39) V613A probably damaging Het
Pcdhga8 T C 18: 37,860,164 (GRCm39) W407R probably benign Het
Pcdhgb4 A G 18: 37,854,415 (GRCm39) D270G probably damaging Het
Pde2a A C 7: 101,160,804 (GRCm39) E918D probably damaging Het
Plekhg5 A G 4: 152,198,431 (GRCm39) D873G probably benign Het
Pno1 A T 11: 17,158,880 (GRCm39) S173T possibly damaging Het
Ppfia3 A G 7: 45,004,160 (GRCm39) I494T possibly damaging Het
Prkrip1 C A 5: 136,210,267 (GRCm39) probably benign Het
Psma5 A G 3: 108,172,484 (GRCm39) I67V probably benign Het
Reep6 G A 10: 80,169,799 (GRCm39) probably null Het
Rtl1 CTCTTCTTCTTCACCATCTTCCTCCTCCTCCCCTTCTTCTTCTTCACCATCTTCCTCCTCCTCCCCTTCTTCTTCTTCACCATCTTCCTCCTCCTC CTCTTCTTCTTCACCATCTTCCTCCTCCTCCCCTTCTTCTTCTTCACCATCTTCCTCCTCCTC 12: 109,557,848 (GRCm39) probably benign Het
Scyl2 C G 10: 89,481,323 (GRCm39) probably null Het
Sdk1 T A 5: 142,082,481 (GRCm39) probably null Het
Senp5 C A 16: 31,808,113 (GRCm39) K380N probably benign Het
Slc22a14 A T 9: 119,060,281 (GRCm39) probably null Het
Slc26a5 T A 5: 22,021,972 (GRCm39) T485S possibly damaging Het
Slc44a5 T C 3: 153,959,356 (GRCm39) I349T probably benign Het
Smarca5 T C 8: 81,463,355 (GRCm39) E71G probably benign Het
Smok2a A T 17: 13,444,666 (GRCm39) H81L probably damaging Het
Snrnp200 A G 2: 127,059,192 (GRCm39) D388G probably benign Het
Tank T C 2: 61,483,766 (GRCm39) V404A probably benign Het
Tek A G 4: 94,753,747 (GRCm39) D1063G probably damaging Het
Tfap2a C T 13: 40,887,150 (GRCm39) C16Y probably benign Het
Tmc1 A G 19: 20,918,267 (GRCm39) probably null Het
Tnc A G 4: 63,902,826 (GRCm39) F1484L probably benign Het
Tnfsf13 T A 11: 69,575,958 (GRCm39) probably null Het
Tnrc6c T A 11: 117,624,444 (GRCm39) S919T probably damaging Het
Trim17 C A 11: 58,859,442 (GRCm39) Q219K probably benign Het
Trim5 T A 7: 103,914,875 (GRCm39) H389L probably benign Het
Trio T A 15: 27,805,740 (GRCm39) M583L possibly damaging Het
Ttll10 A T 4: 156,120,258 (GRCm39) H389Q possibly damaging Het
Usp24 T C 4: 106,219,441 (GRCm39) S546P probably benign Het
Vmn2r50 T A 7: 9,781,539 (GRCm39) D402V probably damaging Het
Vmn2r93 C A 17: 18,533,548 (GRCm39) A484E probably benign Het
Vps13a T C 19: 16,642,028 (GRCm39) T2200A probably benign Het
Wdr36 T A 18: 32,974,958 (GRCm39) H103Q probably benign Het
Zfp534 G A 4: 147,759,667 (GRCm39) T334I possibly damaging Het
Zfp804b C T 5: 6,820,372 (GRCm39) S897N probably benign Het
Other mutations in Vmn1r19
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00948:Vmn1r19 APN 6 57,382,247 (GRCm39) missense probably benign 0.03
IGL01287:Vmn1r19 APN 6 57,382,179 (GRCm39) missense probably damaging 1.00
IGL01516:Vmn1r19 APN 6 57,381,857 (GRCm39) missense probably benign 0.03
IGL01895:Vmn1r19 APN 6 57,382,245 (GRCm39) missense probably benign 0.02
IGL02676:Vmn1r19 APN 6 57,382,025 (GRCm39) missense possibly damaging 0.94
IGL03040:Vmn1r19 APN 6 57,382,347 (GRCm39) missense unknown
IGL03087:Vmn1r19 APN 6 57,381,476 (GRCm39) missense probably benign 0.01
PIT4802001:Vmn1r19 UTSW 6 57,382,037 (GRCm39) missense probably damaging 1.00
R0319:Vmn1r19 UTSW 6 57,381,600 (GRCm39) missense possibly damaging 0.93
R1368:Vmn1r19 UTSW 6 57,381,656 (GRCm39) missense probably benign 0.01
R1997:Vmn1r19 UTSW 6 57,382,033 (GRCm39) missense probably damaging 1.00
R2920:Vmn1r19 UTSW 6 57,381,909 (GRCm39) missense probably benign 0.03
R3857:Vmn1r19 UTSW 6 57,382,098 (GRCm39) missense possibly damaging 0.68
R4090:Vmn1r19 UTSW 6 57,381,720 (GRCm39) missense probably damaging 1.00
R4547:Vmn1r19 UTSW 6 57,381,774 (GRCm39) missense possibly damaging 0.56
R4823:Vmn1r19 UTSW 6 57,382,219 (GRCm39) nonsense probably null
R4951:Vmn1r19 UTSW 6 57,381,927 (GRCm39) missense probably benign 0.36
R5077:Vmn1r19 UTSW 6 57,382,026 (GRCm39) missense probably benign 0.00
R5459:Vmn1r19 UTSW 6 57,381,475 (GRCm39) nonsense probably null
R5625:Vmn1r19 UTSW 6 57,382,281 (GRCm39) missense probably damaging 1.00
R5690:Vmn1r19 UTSW 6 57,381,780 (GRCm39) missense probably benign 0.10
R5761:Vmn1r19 UTSW 6 57,382,338 (GRCm39) missense unknown
R6124:Vmn1r19 UTSW 6 57,381,602 (GRCm39) missense probably benign 0.02
R6373:Vmn1r19 UTSW 6 57,382,317 (GRCm39) missense unknown
R6476:Vmn1r19 UTSW 6 57,381,578 (GRCm39) missense probably damaging 0.99
R6938:Vmn1r19 UTSW 6 57,381,992 (GRCm39) missense possibly damaging 0.94
R7359:Vmn1r19 UTSW 6 57,382,080 (GRCm39) missense probably damaging 0.99
R7568:Vmn1r19 UTSW 6 57,381,813 (GRCm39) missense possibly damaging 0.69
R7893:Vmn1r19 UTSW 6 57,381,664 (GRCm39) missense probably damaging 1.00
R8481:Vmn1r19 UTSW 6 57,381,932 (GRCm39) missense probably damaging 0.99
R8487:Vmn1r19 UTSW 6 57,382,166 (GRCm39) missense probably benign 0.03
R8812:Vmn1r19 UTSW 6 57,381,436 (GRCm39) start gained probably benign
R8907:Vmn1r19 UTSW 6 57,381,991 (GRCm39) missense probably benign
R8976:Vmn1r19 UTSW 6 57,381,719 (GRCm39) missense probably benign 0.01
R9277:Vmn1r19 UTSW 6 57,382,322 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- CTGGAAATTGAGATGAATCCATTCC -3'
(R):5'- TGCCATTCCCAAATTTTAGTGACTC -3'

Sequencing Primer
(F):5'- AACTGCGATTTTATCATGTCTGTC -3'
(R):5'- GTGACTCTAATATGTTTGCAAGCAAG -3'
Posted On 2019-05-13