Mutagenetix > Incidental Mutation

Incidental Mutation 'R7054:Zfp870'

547809

Institutional Source

Beutler Lab

Gene Symbol

Zfp870

Ensembl Gene

ENSMUSG00000095325

Gene Name

zinc finger protein 870

Synonyms

MMRRC Submission

045151-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.070) question?

Stock #

R7054 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

33098193-33110616 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 33102456 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 292 (Y292C)

Ref Sequence

ENSEMBL: ENSMUSP00000154207 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000178401] [ENSMUST00000228075]

AlphaFold

Q6NZJ3

Predicted Effect

probably damaging
Transcript: ENSMUST00000178401
AA Change: Y291C

PolyPhen 2 Score 0.974 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000136197
Gene: ENSMUSG00000095325
AA Change: Y291C

Domain	Start	End	E-Value	Type
KRAB	3	60	1.01e-19	SMART
ZnF_C2H2	193	215	4.5e1	SMART
ZnF_C2H2	221	241	6.4e0	SMART
ZnF_C2H2	277	299	2.24e-3	SMART
ZnF_C2H2	305	327	9.58e-3	SMART
ZnF_C2H2	333	355	2.86e-1	SMART
ZnF_C2H2	361	383	6.42e-4	SMART
ZnF_C2H2	389	411	1.18e-2	SMART
ZnF_C2H2	417	439	3.89e-3	SMART
ZnF_C2H2	445	467	5.5e-3	SMART
ZnF_C2H2	473	495	4.47e-3	SMART
ZnF_C2H2	501	523	5.9e-3	SMART
ZnF_C2H2	529	551	3.11e-2	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000228075
AA Change: Y292C

PolyPhen 2 Score 0.974 (Sensitivity: 0.76; Specificity: 0.96)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.0%

Validation Efficiency

94% (67/71)

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930553M12Rik	T	A	4: 88,786,486 (GRCm39)	H44L	unknown	Het
Abcc3	T	C	11: 94,256,051 (GRCm39)	K478R	probably benign	Het
Ank2	A	T	3: 126,736,952 (GRCm39)		probably benign	Het
Apod	A	G	16: 31,129,950 (GRCm39)	V2A	probably benign	Het
Armh4	C	A	14: 50,011,155 (GRCm39)	S184I	probably damaging	Het
Aspg	T	A	12: 112,092,824 (GRCm39)	D530E	probably damaging	Het
Atxn7	A	T	14: 14,100,878 (GRCm38)	T855S	probably benign	Het
Blmh	G	C	11: 76,859,451 (GRCm39)	G351R	probably damaging	Het
Cc2d2a	C	T	5: 43,857,321 (GRCm39)	R454*	probably null	Het
Cenpp	T	C	13: 49,619,233 (GRCm39)	E188G	probably damaging	Het
Cimip3	A	G	17: 47,748,114 (GRCm39)		probably null	Het
Creg2	T	C	1: 39,662,376 (GRCm39)	E252G	probably benign	Het
Dot1l	A	G	10: 80,622,857 (GRCm39)	Y636C	probably damaging	Het
Dpy30	A	G	17: 74,614,835 (GRCm39)	I36T	probably benign	Het
Eed	A	G	7: 89,613,935 (GRCm39)		probably null	Het
Fmn1	A	G	2: 113,195,353 (GRCm39)	D351G	unknown	Het
Fra10ac1	C	T	19: 38,212,567 (GRCm39)		probably benign	Het
Gdpd4	T	A	7: 97,623,136 (GRCm39)	I249N	probably damaging	Het
Glb1l2	A	T	9: 26,676,423 (GRCm39)	V600D	probably null	Het
Gm13889	A	T	2: 93,787,459 (GRCm39)		probably benign	Het
Gm17654	T	A	14: 43,813,327 (GRCm39)	N188Y		Het
Gm3327	T	C	14: 44,363,732 (GRCm39)	F112S		Het
H2-Ab1	T	C	17: 34,482,316 (GRCm39)	S11P	probably benign	Het
Hcn4	T	C	9: 58,763,000 (GRCm39)	S522P	unknown	Het
Hfm1	T	C	5: 107,043,909 (GRCm39)	T576A	probably benign	Het
Hoxa1	A	G	6: 52,135,180 (GRCm39)	S8P	probably damaging	Het
Hoxd13	A	G	2: 74,499,369 (GRCm39)	Y239C	probably damaging	Het
Ifih1	T	A	2: 62,440,859 (GRCm39)	I485L	probably benign	Het
Ift52	G	A	2: 162,871,716 (GRCm39)	V183M	probably damaging	Het
Ikbkb	A	G	8: 23,161,658 (GRCm39)	V410A	possibly damaging	Het
Il22ra1	G	A	4: 135,478,473 (GRCm39)	V515I	probably benign	Het
Klk1b3	A	T	7: 43,850,863 (GRCm39)	I132F	probably damaging	Het
Limk2	T	C	11: 3,305,448 (GRCm39)	T206A	possibly damaging	Het
Llph	A	T	10: 120,067,240 (GRCm39)		probably benign	Het
Lrrc26	T	A	2: 25,180,087 (GRCm39)	D29E	probably benign	Het
Ltbp4	A	G	7: 27,007,191 (GRCm39)		probably null	Het
Mageb3	A	T	2: 121,784,973 (GRCm39)	V243E	probably damaging	Het
Mfhas1	T	C	8: 36,055,792 (GRCm39)	V89A	probably benign	Het
Mycbp2	G	A	14: 103,393,534 (GRCm39)	T2899I	possibly damaging	Het
Nckap5	A	T	1: 126,186,449 (GRCm39)		probably null	Het
Ncor1	T	C	11: 62,275,619 (GRCm39)	D530G	probably null	Het
Or10ag55-ps1	T	A	2: 87,114,775 (GRCm39)	M47K	probably benign	Het
Or56a3b	C	T	7: 104,771,170 (GRCm39)	R169*	probably null	Het
Pax4	A	G	6: 28,446,322 (GRCm39)	I57T	probably damaging	Het
Peg12	T	C	7: 62,113,711 (GRCm39)	I129V	possibly damaging	Het
Pex6	G	A	17: 47,031,447 (GRCm39)	A416T	probably benign	Het
Pgghg	G	A	7: 140,524,631 (GRCm39)	R326H	probably benign	Het
Pgk2	T	A	17: 40,519,366 (GRCm39)	M21L	probably benign	Het
Polh	A	T	17: 46,509,642 (GRCm39)	W64R	probably benign	Het
Rassf7	T	A	7: 140,797,556 (GRCm39)	H256Q	probably benign	Het
Rc3h2	A	G	2: 37,265,258 (GRCm39)	M1184T	probably benign	Het
Ror1	A	T	4: 100,299,436 (GRCm39)	E936D	probably benign	Het
Skic3	G	A	13: 76,283,079 (GRCm39)	A769T	probably damaging	Het
Slco1b2	A	T	6: 141,617,974 (GRCm39)	T440S	probably damaging	Het
Specc1	T	A	11: 62,008,604 (GRCm39)	V40E	probably damaging	Het
Tarbp1	T	A	8: 127,201,234 (GRCm39)	S191C	possibly damaging	Het
Timm22	A	G	11: 76,298,071 (GRCm39)	E14G	possibly damaging	Het
Tpp2	T	A	1: 44,022,318 (GRCm39)	D905E	probably damaging	Het
Trav7-5	T	C	14: 53,768,756 (GRCm39)	L108P	probably damaging	Het
Ttc9b	A	G	7: 27,353,667 (GRCm39)	T106A	probably benign	Het
Ttn	T	C	2: 76,545,012 (GRCm39)	S32697G	probably damaging	Het
Usp17la	T	G	7: 104,510,514 (GRCm39)	L373R	probably benign	Het
Vmn1r113	A	G	7: 20,521,427 (GRCm39)	N73S	probably benign	Het
Vmn1r42	T	C	6: 89,822,051 (GRCm39)	T173A	possibly damaging	Het
Vmn2r106	A	G	17: 20,499,182 (GRCm39)	V243A	probably damaging	Het
Vmn2r111	T	C	17: 22,778,032 (GRCm39)	N549S	possibly damaging	Het
Vmn2r25	T	A	6: 123,800,569 (GRCm39)	D591V	probably damaging	Het
Zc3h13	T	C	14: 75,559,227 (GRCm39)	S379P	probably benign	Het
Zfp977	A	T	7: 42,229,786 (GRCm39)	N246K	possibly damaging	Het
Zp1	G	A	19: 10,896,104 (GRCm39)	T207M	probably damaging	Het

Other mutations in Zfp870

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01304:Zfp870	APN	17	33,101,980 (GRCm39)	missense	possibly damaging	0.72
R1591:Zfp870	UTSW	17	33,102,990 (GRCm39)	missense	probably damaging	1.00
R1892:Zfp870	UTSW	17	33,102,863 (GRCm39)	missense	possibly damaging	0.66
R1941:Zfp870	UTSW	17	33,101,778 (GRCm39)	missense	possibly damaging	0.71
R1997:Zfp870	UTSW	17	33,103,027 (GRCm39)	missense	possibly damaging	0.66
R2289:Zfp870	UTSW	17	33,102,334 (GRCm39)	missense	probably benign	0.27
R4240:Zfp870	UTSW	17	33,104,710 (GRCm39)	missense	probably benign	0.00
R4860:Zfp870	UTSW	17	33,102,314 (GRCm39)	nonsense	probably null
R4860:Zfp870	UTSW	17	33,102,314 (GRCm39)	nonsense	probably null
R5306:Zfp870	UTSW	17	33,102,627 (GRCm39)	missense	probably damaging	1.00
R6425:Zfp870	UTSW	17	33,102,045 (GRCm39)	missense	possibly damaging	0.66
R6736:Zfp870	UTSW	17	33,102,570 (GRCm39)	missense	probably benign
R7291:Zfp870	UTSW	17	33,102,828 (GRCm39)	missense	probably damaging	0.97
R7466:Zfp870	UTSW	17	33,102,736 (GRCm39)	missense	possibly damaging	0.66
R7681:Zfp870	UTSW	17	33,101,664 (GRCm39)	missense	probably benign
R8230:Zfp870	UTSW	17	33,102,663 (GRCm39)	missense	possibly damaging	0.46
R8346:Zfp870	UTSW	17	33,102,843 (GRCm39)	missense	possibly damaging	0.92
R8673:Zfp870	UTSW	17	33,101,904 (GRCm39)	missense	probably damaging	0.97
R8695:Zfp870	UTSW	17	33,102,679 (GRCm39)	missense	possibly damaging	0.46
R8736:Zfp870	UTSW	17	33,104,966 (GRCm39)	missense	possibly damaging	0.92
R9057:Zfp870	UTSW	17	33,102,793 (GRCm39)	missense	probably benign	0.27

Predicted Primers

PCR Primer
(F):5'- ACCACTGTGAGCTACCTTGTG -3'
(R):5'- AACTGTGTGGCAAAGGCTTTG -3'

Sequencing Primer
(F):5'- GAGCTACCTTGTGCTTTTGAAAC -3'
(R):5'- AAAGGCTTTGCTCGGTTTGGTAAC -3'

Posted On

2019-05-13