Mutagenetix > Incidental Mutation

Incidental Mutation 'R0613:Gpr107'

54864

Institutional Source

Beutler Lab

Gene Symbol

Gpr107

Ensembl Gene

ENSMUSG00000000194

Gene Name

G protein-coupled receptor 107

Synonyms

MMRRC Submission

038802-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R0613 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

31042099-31106579 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 31068297 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 253 (Y253C)

Ref Sequence

ENSEMBL: ENSMUSP00000056739 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000056433]

AlphaFold

Q8BUV8

Predicted Effect

probably damaging
Transcript: ENSMUST00000056433
AA Change: Y253C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000056739
Gene: ENSMUSG00000000194
AA Change: Y253C

Domain	Start	End	E-Value	Type
signal peptide	1	33	N/A	INTRINSIC
Pfam:Lung_7-TM_R	213	504	3e-100	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000151991

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172422

Meta Mutation Damage Score

0.7301

Coding Region Coverage

1x: 99.4%
3x: 98.9%
10x: 97.6%
20x: 95.3%

Validation Efficiency

100% (72/72)

MGI Phenotype

PHENOTYPE: Homozygous inactivation of this gene causes complete embryonic lethality during organogenesis, associated with reduced expression of genes implicated in the cubilin-megalin multi-ligand endocytic receptor complex. Homozygous null MEFs show defects in receptor-mediated endocytosis and recycling. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acd	A	T	8: 106,427,200 (GRCm39)		probably null	Het
Adcy9	A	G	16: 4,237,403 (GRCm39)	S3P	probably damaging	Het
Adgrl4	T	C	3: 151,248,859 (GRCm39)		probably benign	Het
Aff3	T	C	1: 38,249,004 (GRCm39)	E700G	probably benign	Het
Ahctf1	A	G	1: 179,596,979 (GRCm39)	S56P	probably damaging	Het
Atp12a	T	A	14: 56,611,978 (GRCm39)	I384N	probably damaging	Het
Brca1	A	T	11: 101,399,036 (GRCm39)	S1519T	probably benign	Het
Ccl25	T	C	8: 4,399,850 (GRCm39)	V94A	probably benign	Het
Cep170	T	C	1: 176,602,246 (GRCm39)	T287A	probably benign	Het
Ces1a	A	G	8: 93,752,209 (GRCm39)	S383P	probably benign	Het
Cntnap3	A	T	13: 64,906,228 (GRCm39)	F793I	probably damaging	Het
Ctsm	T	C	13: 61,687,496 (GRCm39)	R89G	probably damaging	Het
Cyp2j12	T	G	4: 95,990,316 (GRCm39)	T417P	probably damaging	Het
D430041D05Rik	G	C	2: 103,998,295 (GRCm39)	P1836R	probably damaging	Het
Edn2	T	A	4: 120,019,061 (GRCm39)		probably null	Het
Emc1	T	A	4: 139,102,383 (GRCm39)		probably benign	Het
Entrep1	T	A	19: 23,963,853 (GRCm39)	N239Y	probably damaging	Het
Fras1	T	C	5: 96,848,347 (GRCm39)		probably benign	Het
Fsip2	A	T	2: 82,824,139 (GRCm39)	D6624V	probably damaging	Het
Gpr108	A	G	17: 57,545,174 (GRCm39)		probably benign	Het
Grik1	A	G	16: 87,848,221 (GRCm39)		probably null	Het
Gtf3c1	G	A	7: 125,243,306 (GRCm39)	P1766L	possibly damaging	Het
Gucy2c	A	T	6: 136,737,721 (GRCm39)	N293K	probably damaging	Het
Hps6	C	A	19: 45,992,260 (GRCm39)	P66T	probably benign	Het
Hspa9	A	T	18: 35,081,033 (GRCm39)	V216E	probably damaging	Het
Igsf8	T	A	1: 172,145,156 (GRCm39)	M224K	probably benign	Het
Igsf9b	T	C	9: 27,238,216 (GRCm39)	V569A	probably damaging	Het
Itgb4	A	T	11: 115,884,168 (GRCm39)	I952F	probably damaging	Het
Kcnh4	C	T	11: 100,637,758 (GRCm39)	G633E	probably benign	Het
Khdrbs2	A	G	1: 32,696,603 (GRCm39)	H344R	possibly damaging	Het
Kmo	C	A	1: 175,465,458 (GRCm39)	R71S	probably damaging	Het
Lrrc31	A	G	3: 30,739,184 (GRCm39)		probably benign	Het
Map1b	T	A	13: 99,578,149 (GRCm39)	D168V	probably damaging	Het
Mfsd6	T	C	1: 52,697,855 (GRCm39)		probably benign	Het
Mgst1	G	A	6: 138,133,243 (GRCm39)	G186D	probably damaging	Het
Mrc1	C	T	2: 14,299,630 (GRCm39)	A740V	probably damaging	Het
Mroh2a	G	A	1: 88,171,672 (GRCm39)	R770Q	probably damaging	Het
Mtor	T	C	4: 148,610,503 (GRCm39)	Y1605H	possibly damaging	Het
Ncoa4	T	A	14: 31,898,509 (GRCm39)	L443Q	probably damaging	Het
Nelfa	G	A	5: 34,060,807 (GRCm39)		probably benign	Het
Nepn	T	A	10: 52,277,353 (GRCm39)	L363Q	probably damaging	Het
Nfat5	A	G	8: 108,092,927 (GRCm39)	T630A	possibly damaging	Het
Nipal4	A	T	11: 46,041,211 (GRCm39)	V328E	probably benign	Het
Or11h4b	T	A	14: 50,918,861 (GRCm39)	I77F	probably benign	Het
Or2y1e	T	A	11: 49,218,575 (GRCm39)	S112R	possibly damaging	Het
Or4c122	A	T	2: 89,079,469 (GRCm39)	C178S	probably damaging	Het
Or4d2b	A	T	11: 87,780,053 (GRCm39)	V223E	possibly damaging	Het
Or6c76	T	A	10: 129,612,131 (GRCm39)	M116K	probably damaging	Het
Or8d2	T	A	9: 38,759,909 (GRCm39)	C166*	probably null	Het
Otogl	A	T	10: 107,652,931 (GRCm39)	N1140K	probably damaging	Het
Ppip5k2	A	C	1: 97,680,465 (GRCm39)	Y236*	probably null	Het
Prelid1	C	T	13: 55,472,156 (GRCm39)	R111*	probably null	Het
Prpf8	T	C	11: 75,394,270 (GRCm39)	L1771P	probably damaging	Het
Ptprb	A	T	10: 116,138,230 (GRCm39)	Y378F	possibly damaging	Het
Ptprb	A	G	10: 116,138,283 (GRCm39)	T396A	possibly damaging	Het
Rab3il1	T	C	19: 10,005,728 (GRCm39)	L174P	probably damaging	Het
Rab4a	T	C	8: 124,550,574 (GRCm39)	V18A	possibly damaging	Het
Scn3a	T	A	2: 65,302,628 (GRCm39)	M1273L	possibly damaging	Het
Sdhc	A	T	1: 170,957,413 (GRCm39)	V156E	probably benign	Het
Slco3a1	T	C	7: 73,996,382 (GRCm39)		probably benign	Het
Syne3	T	C	12: 104,924,371 (GRCm39)	T343A	probably benign	Het
Syt11	A	G	3: 88,669,776 (GRCm39)	C39R	probably damaging	Het
Tll2	G	T	19: 41,093,429 (GRCm39)	D462E	probably damaging	Het
Tmem132e	T	A	11: 82,329,164 (GRCm39)	V481D	probably damaging	Het
Tmem161b	C	T	13: 84,399,439 (GRCm39)	L17F	probably damaging	Het
Vmn2r105	T	A	17: 20,428,578 (GRCm39)	I833F	probably damaging	Het
Vstm2a	A	T	11: 16,213,140 (GRCm39)	N175I	probably damaging	Het
Xpnpep1	G	T	19: 52,994,784 (GRCm39)	D238E	probably damaging	Het
Zfp112	G	A	7: 23,826,453 (GRCm39)	G807D	probably benign	Het
Zfp518b	A	T	5: 38,830,946 (GRCm39)	V353E	probably damaging	Het
Zfp69	T	C	4: 120,791,544 (GRCm39)	E39G	probably benign	Het
Zfp865	A	G	7: 5,032,090 (GRCm39)	H25R	possibly damaging	Het

Other mutations in Gpr107

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00586:Gpr107	APN	2	31,062,006 (GRCm39)	missense	probably benign	0.00
IGL00828:Gpr107	APN	2	31,067,795 (GRCm39)	critical splice acceptor site	probably null
IGL01138:Gpr107	APN	2	31,062,028 (GRCm39)	missense	probably benign	0.06
IGL01589:Gpr107	APN	2	31,057,163 (GRCm39)	splice site	probably benign
IGL02164:Gpr107	APN	2	31,068,298 (GRCm39)	nonsense	probably null
IGL02176:Gpr107	APN	2	31,058,858 (GRCm39)	missense	probably benign	0.01
IGL02190:Gpr107	APN	2	31,068,332 (GRCm39)	missense	probably damaging	1.00
IGL02234:Gpr107	APN	2	31,067,845 (GRCm39)	missense	probably damaging	1.00
IGL02838:Gpr107	APN	2	31,104,329 (GRCm39)	missense	probably benign	0.01
PIT4142001:Gpr107	UTSW	2	31,057,083 (GRCm39)	missense	probably benign	0.18
R0630:Gpr107	UTSW	2	31,104,309 (GRCm39)	missense	possibly damaging	0.89
R0735:Gpr107	UTSW	2	31,062,006 (GRCm39)	missense	probably benign	0.00
R1263:Gpr107	UTSW	2	31,068,267 (GRCm39)	missense	possibly damaging	0.82
R1572:Gpr107	UTSW	2	31,057,037 (GRCm39)	missense	probably damaging	1.00
R1675:Gpr107	UTSW	2	31,057,063 (GRCm39)	missense	possibly damaging	0.77
R2421:Gpr107	UTSW	2	31,075,541 (GRCm39)	missense	probably damaging	1.00
R4569:Gpr107	UTSW	2	31,097,677 (GRCm39)	splice site	probably benign
R4647:Gpr107	UTSW	2	31,100,513 (GRCm39)	missense	probably damaging	1.00
R4656:Gpr107	UTSW	2	31,104,261 (GRCm39)	missense	probably damaging	1.00
R4844:Gpr107	UTSW	2	31,078,686 (GRCm39)	splice site	probably null
R5385:Gpr107	UTSW	2	31,104,263 (GRCm39)	missense	probably benign	0.01
R5416:Gpr107	UTSW	2	31,075,560 (GRCm39)	missense	probably damaging	1.00
R5562:Gpr107	UTSW	2	31,042,375 (GRCm39)	missense	probably damaging	1.00
R5564:Gpr107	UTSW	2	31,042,375 (GRCm39)	missense	probably damaging	1.00
R5652:Gpr107	UTSW	2	31,075,601 (GRCm39)	missense	probably benign	0.16
R6075:Gpr107	UTSW	2	31,042,384 (GRCm39)	missense	probably benign	0.05
R7186:Gpr107	UTSW	2	31,042,371 (GRCm39)	start codon destroyed	possibly damaging	0.59
R7511:Gpr107	UTSW	2	31,068,358 (GRCm39)	missense	probably benign	0.03
R7587:Gpr107	UTSW	2	31,058,838 (GRCm39)	missense	probably benign
R7946:Gpr107	UTSW	2	31,078,716 (GRCm39)	missense	probably damaging	1.00
R8108:Gpr107	UTSW	2	31,074,881 (GRCm39)	missense	probably damaging	1.00
R8518:Gpr107	UTSW	2	31,066,939 (GRCm39)	missense	probably benign
R9320:Gpr107	UTSW	2	31,078,728 (GRCm39)	missense	possibly damaging	0.93
R9661:Gpr107	UTSW	2	31,057,075 (GRCm39)	missense	probably benign	0.06

Predicted Primers

PCR Primer
(F):5'- TGAGTACCTCACGGGACATCGATAG -3'
(R):5'- ATCCAGGAGGATGAAATCTTGCAGC -3'

Sequencing Primer
(F):5'- CATCCTGAGGGTATGTGAACC -3'
(R):5'- AGGATGAAATCTTGCAGCTCTCC -3'

Posted On

2013-07-11