Incidental Mutation 'R7083:Naf1'
ID549684
Institutional Source Beutler Lab
Gene Symbol Naf1
Ensembl Gene ENSMUSG00000014907
Gene Namenuclear assembly factor 1 ribonucleoprotein
SynonymsLOC234344
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.940) question?
Stock #R7083 (G1)
Quality Score213.468
Status Not validated
Chromosome8
Chromosomal Location66860217-66890564 bp(+) (GRCm38)
Type of Mutationunclassified
DNA Base Change (assembly) GCCGCCGCCGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCCGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCCGCCAGCCCCGA to GCCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCTGCCAGCCCCGAACTCGGATCCCGGCGGAAGACCACCGCCGCCGCCAGCCCCGAGCTCGGATCCCGGCGGAAGACCACCGCCGCCGCCAGCCCCGA at 66860486 bp
ZygosityHeterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s): [ENSMUST00000118009]
Predicted Effect probably benign
Transcript: ENSMUST00000118009
SMART Domains Protein: ENSMUSP00000112640
Gene: ENSMUSG00000014907

DomainStartEndE-ValueType
low complexity region 35 180 N/A INTRINSIC
low complexity region 192 200 N/A INTRINSIC
low complexity region 218 246 N/A INTRINSIC
Pfam:Gar1 280 431 2.3e-48 PFAM
low complexity region 517 532 N/A INTRINSIC
low complexity region 535 548 N/A INTRINSIC
low complexity region 570 585 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000212916
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete embryonic lethality between implantation and placentation while heterozygotes show no evident ribosomal pathology. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam21 A T 12: 81,560,241 M249K possibly damaging Het
Arhgef38 T A 3: 133,132,436 Q613L unknown Het
Arpp21 A G 9: 112,183,544 V70A probably benign Het
AW551984 T C 9: 39,597,647 N327S probably damaging Het
Bnc1 T C 7: 81,973,310 K723R probably damaging Het
Btbd7 A G 12: 102,788,335 L724P probably damaging Het
Btnl10 G T 11: 58,919,137 V35F probably damaging Het
Cd22 T A 7: 30,868,048 T704S probably damaging Het
Cd4 T G 6: 124,870,572 S210R probably benign Het
Cped1 A G 6: 22,123,580 Q444R probably benign Het
Dusp26 A G 8: 31,091,719 probably benign Het
Dync1i1 C T 6: 5,969,429 A418V probably damaging Het
Fibp A G 19: 5,463,631 D232G probably damaging Het
Frem2 T A 3: 53,537,493 T2406S probably damaging Het
Gm40460 ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG 7: 142,240,713 probably benign Het
Gpr39 T A 1: 125,677,418 W28R probably damaging Het
Greb1 A G 12: 16,723,314 V253A probably benign Het
Hexim1 T G 11: 103,117,166 L82W possibly damaging Het
Hmga1 G T 17: 27,560,971 R49L possibly damaging Het
Itch A T 2: 155,210,444 N655Y probably damaging Het
Izumo2 A G 7: 44,710,333 E129G probably damaging Het
Klk1b24 G A 7: 44,191,801 C186Y probably damaging Het
Lnx1 G A 5: 74,628,185 S31F possibly damaging Het
Lrmp A T 6: 145,169,783 N349I probably damaging Het
Lrrc37a T C 11: 103,503,340 I420V probably benign Het
Ltk A C 2: 119,752,074 C776G probably damaging Het
Mast4 A C 13: 102,737,715 L1715R probably damaging Het
Med28 T C 5: 45,523,536 probably null Het
Nckap1l C A 15: 103,482,124 T774K probably damaging Het
Nfkbiz T C 16: 55,818,300 K266E possibly damaging Het
Ntrk3 T A 7: 78,250,839 D584V probably damaging Het
Olfr107 T C 17: 37,406,172 V208A probably benign Het
Olfr1261 A G 2: 89,993,857 I155V probably benign Het
Olfr132 T A 17: 38,130,710 T161S probably benign Het
Olfr193 T C 16: 59,110,037 D191G probably damaging Het
Olfr733 G A 14: 50,299,279 T10I possibly damaging Het
Picalm T A 7: 90,176,768 I376K probably benign Het
Pkd1l3 GACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCA GACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCA 8: 109,624,195 probably benign Het
Prps1l3 A T 12: 57,239,248 I275L probably benign Het
Psg26 G A 7: 18,480,009 R243* probably null Het
Ranbp2 A G 10: 58,479,230 H1924R probably damaging Het
Rasef T C 4: 73,790,984 D4G probably benign Het
Rttn T C 18: 89,090,598 L1642P probably damaging Het
Shroom3 T C 5: 92,964,525 L1915P probably damaging Het
Slc26a10 A G 10: 127,177,168 V319A probably damaging Het
Slc4a10 A G 2: 62,234,495 N231S probably benign Het
Sox18 T C 2: 181,670,372 Q322R possibly damaging Het
Syde1 G T 10: 78,587,069 P490T probably benign Het
Syne2 A G 12: 75,943,888 I1881M probably damaging Het
Taf1c T C 8: 119,600,668 D387G probably damaging Het
Tenm4 T A 7: 96,895,349 Y2228N probably damaging Het
Tmem173 T C 18: 35,734,650 H331R probably damaging Het
Tubgcp5 C T 7: 55,800,695 Q185* probably null Het
Vmn2r44 T A 7: 8,378,370 I175F probably benign Het
Zdhhc7 C A 8: 120,085,427 C152F probably damaging Het
Zfp52 T A 17: 21,560,130 M80K possibly damaging Het
Zfp612 T C 8: 110,089,136 I325T probably damaging Het
Zmiz1 T G 14: 25,651,948 F597V probably damaging Het
Other mutations in Naf1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00806:Naf1 APN 8 66885800 missense probably damaging 1.00
IGL01861:Naf1 APN 8 66864533 splice site probably benign
IGL02817:Naf1 APN 8 66883525 missense probably damaging 1.00
R0016:Naf1 UTSW 8 66889055 splice site probably benign
R0092:Naf1 UTSW 8 66889108 missense probably benign 0.24
R2062:Naf1 UTSW 8 66887780 missense probably damaging 1.00
R2065:Naf1 UTSW 8 66887780 missense probably damaging 1.00
R2066:Naf1 UTSW 8 66887780 missense probably damaging 1.00
R2068:Naf1 UTSW 8 66887780 missense probably damaging 1.00
R2209:Naf1 UTSW 8 66860536 unclassified probably benign
R4296:Naf1 UTSW 8 66889462 missense possibly damaging 0.92
R5186:Naf1 UTSW 8 66879646 missense probably benign 0.10
R5560:Naf1 UTSW 8 66883545 missense probably damaging 1.00
R6122:Naf1 UTSW 8 66883444 missense probably damaging 1.00
R6143:Naf1 UTSW 8 66877695 missense possibly damaging 0.95
R6389:Naf1 UTSW 8 66861028 missense possibly damaging 0.66
R6827:Naf1 UTSW 8 66877691 missense possibly damaging 0.65
R7444:Naf1 UTSW 8 66860548 unclassified probably benign
R7727:Naf1 UTSW 8 66860548 unclassified probably benign
R7818:Naf1 UTSW 8 66889376 missense probably damaging 0.97
R7860:Naf1 UTSW 8 66860513 missense unknown
R7923:Naf1 UTSW 8 66860548 unclassified probably benign
R7977:Naf1 UTSW 8 66860494 unclassified probably benign
R8420:Naf1 UTSW 8 66860548 unclassified probably benign
R8462:Naf1 UTSW 8 66860548 unclassified probably benign
Predicted Primers PCR Primer
(F):5'- CTAGCTTGGCTTCTGAGGAGA -3'
(R):5'- TGGTCTTCCGCCGGGATC -3'

Sequencing Primer
(F):5'- AGACCCTCGCGCTGCTC -3'
(R):5'- TGGTCTTCCGCCGGGATC -3'
Posted On2019-05-15