Incidental Mutation 'R0614:Or4d11'
ID 54980
Institutional Source Beutler Lab
Gene Symbol Or4d11
Ensembl Gene ENSMUSG00000067529
Gene Name olfactory receptor family 4 subfamily D member 11
Synonyms MOR239-3, GA_x6K02T2RE5P-2393361-2392429, Olfr1423
MMRRC Submission 038803-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.373) question?
Stock # R0614 (G1)
Quality Score 225
Status Validated
Chromosome 19
Chromosomal Location 12013172-12014104 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 12013929 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Lysine at position 59 (M59K)
Ref Sequence ENSEMBL: ENSMUSP00000150649 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000087831] [ENSMUST00000214472]
AlphaFold Q8VFV0
Predicted Effect possibly damaging
Transcript: ENSMUST00000087831
AA Change: M59K

PolyPhen 2 Score 0.930 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000085134
Gene: ENSMUSG00000067529
AA Change: M59K

DomainStartEndE-ValueType
Pfam:7tm_4 31 304 2.7e-48 PFAM
Pfam:7tm_1 41 287 2.5e-22 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000207831
Predicted Effect possibly damaging
Transcript: ENSMUST00000214472
AA Change: M59K

PolyPhen 2 Score 0.930 (Sensitivity: 0.81; Specificity: 0.94)
Meta Mutation Damage Score 0.3863 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.9%
  • 10x: 97.4%
  • 20x: 94.9%
Validation Efficiency 97% (61/63)
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2210408I21Rik C T 13: 77,340,782 (GRCm39) T137I probably benign Het
3110082I17Rik C T 5: 139,349,786 (GRCm39) V88I possibly damaging Het
4930453N24Rik T A 16: 64,586,977 (GRCm39) Q249L probably damaging Het
Ap1g2 C T 14: 55,337,230 (GRCm39) V702I probably benign Het
Armcx5 G A X: 134,647,564 (GRCm39) E547K probably damaging Het
Asah2 C A 19: 31,994,128 (GRCm39) V406L probably damaging Het
Atp8b1 T C 18: 64,666,658 (GRCm39) probably benign Het
Axl C A 7: 25,473,588 (GRCm39) R346L probably benign Het
Baz1a G A 12: 54,988,304 (GRCm39) R282* probably null Het
Card14 A G 11: 119,213,653 (GRCm39) N200S probably benign Het
Cdt1 A G 8: 123,294,876 (GRCm39) T28A probably benign Het
Cep250 C T 2: 155,812,017 (GRCm39) Q438* probably null Het
Dapk1 C A 13: 60,865,946 (GRCm39) P181Q probably damaging Het
Dnah17 C T 11: 117,961,394 (GRCm39) probably benign Het
Dph7 T C 2: 24,858,968 (GRCm39) probably null Het
Edc4 A T 8: 106,616,028 (GRCm39) D801V possibly damaging Het
Eif4g2 A G 7: 110,676,430 (GRCm39) probably null Het
Eml2 T C 7: 18,936,516 (GRCm39) L531P probably damaging Het
Ephb2 T C 4: 136,400,676 (GRCm39) Y533C probably benign Het
Fcho1 C T 8: 72,165,204 (GRCm39) A418T probably benign Het
Fsip2 A G 2: 82,807,877 (GRCm39) K1399E probably benign Het
Hcls1 A G 16: 36,782,987 (GRCm39) D446G probably damaging Het
Hif1a T A 12: 73,992,405 (GRCm39) N787K probably damaging Het
Ints14 T C 9: 64,871,715 (GRCm39) S18P probably benign Het
Kalrn A T 16: 33,814,040 (GRCm39) probably benign Het
Llgl2 T A 11: 115,741,093 (GRCm39) D502E probably damaging Het
Lrwd1 A G 5: 136,152,354 (GRCm39) V570A probably damaging Het
Mga C G 2: 119,794,947 (GRCm39) P2877R probably damaging Het
Mvd T C 8: 123,163,292 (GRCm39) I313V probably benign Het
Myo15b C A 11: 115,773,739 (GRCm39) P270T probably damaging Het
Naip1 C A 13: 100,580,708 (GRCm39) V180L probably benign Het
Ofd1 T C X: 165,218,536 (GRCm39) probably benign Het
Or1j19 T A 2: 36,676,705 (GRCm39) L56H probably damaging Het
Or4c125 T A 2: 89,170,329 (GRCm39) I106F probably damaging Het
Otogl G A 10: 107,634,216 (GRCm39) P1420S probably benign Het
Pakap C A 4: 57,856,720 (GRCm39) A926E probably benign Het
Pcnt C T 10: 76,256,150 (GRCm39) V697M probably damaging Het
Plekha7 A T 7: 115,753,880 (GRCm39) Y702* probably null Het
Plxnb3 A G X: 72,807,964 (GRCm39) probably benign Het
Ptgis A G 2: 167,048,802 (GRCm39) F405L probably damaging Het
Ptprk C T 10: 27,951,132 (GRCm39) P19L probably damaging Het
Ptprt A G 2: 161,654,040 (GRCm39) V530A possibly damaging Het
Rasgrp4 A T 7: 28,845,276 (GRCm39) Y299F probably damaging Het
Slc39a11 T A 11: 113,414,452 (GRCm39) probably null Het
Slc6a15 T A 10: 103,240,213 (GRCm39) L312* probably null Het
Slf1 T A 13: 77,197,233 (GRCm39) M794L probably benign Het
Sntg2 G A 12: 30,307,977 (GRCm39) T236I possibly damaging Het
Stau1 T C 2: 166,792,726 (GRCm39) Y413C probably damaging Het
Syne2 T G 12: 75,959,127 (GRCm39) probably null Het
Tas2r104 A T 6: 131,662,165 (GRCm39) N181K probably damaging Het
Tmem81 G A 1: 132,435,469 (GRCm39) V92I probably benign Het
Trap1 A G 16: 3,878,615 (GRCm39) probably benign Het
Trip12 T C 1: 84,735,482 (GRCm39) E905G probably damaging Het
Usp2 C T 9: 44,003,789 (GRCm39) R494* probably null Het
Vps13a G T 19: 16,630,058 (GRCm39) R2692S probably damaging Het
Zfhx3 T C 8: 109,675,171 (GRCm39) S2074P probably benign Het
Zfhx3 C G 8: 109,675,599 (GRCm39) Y2216* probably null Het
Zfp423 A G 8: 88,508,742 (GRCm39) F409S probably damaging Het
Zfp472 G A 17: 33,196,908 (GRCm39) E328K possibly damaging Het
Zfp619 T A 7: 39,187,099 (GRCm39) M1043K possibly damaging Het
Zfp940 T C 7: 29,545,671 (GRCm39) I79V probably benign Het
Other mutations in Or4d11
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01333:Or4d11 APN 19 12,013,305 (GRCm39) missense probably benign 0.36
IGL01843:Or4d11 APN 19 12,014,041 (GRCm39) missense probably benign
IGL01915:Or4d11 APN 19 12,013,461 (GRCm39) missense probably damaging 1.00
IGL02283:Or4d11 APN 19 12,013,219 (GRCm39) missense possibly damaging 0.87
IGL02807:Or4d11 APN 19 12,013,648 (GRCm39) missense probably benign 0.12
IGL02976:Or4d11 APN 19 12,013,337 (GRCm39) nonsense probably null
IGL03142:Or4d11 APN 19 12,013,752 (GRCm39) missense probably damaging 1.00
R0326:Or4d11 UTSW 19 12,013,525 (GRCm39) missense probably benign 0.00
R0369:Or4d11 UTSW 19 12,013,765 (GRCm39) missense probably benign 0.01
R1940:Or4d11 UTSW 19 12,013,275 (GRCm39) missense probably benign 0.06
R1978:Or4d11 UTSW 19 12,013,705 (GRCm39) missense probably benign 0.06
R2013:Or4d11 UTSW 19 12,013,518 (GRCm39) missense probably damaging 1.00
R2179:Or4d11 UTSW 19 12,013,452 (GRCm39) missense probably damaging 1.00
R3972:Or4d11 UTSW 19 12,013,383 (GRCm39) missense probably damaging 0.98
R5051:Or4d11 UTSW 19 12,013,288 (GRCm39) missense possibly damaging 0.88
R5484:Or4d11 UTSW 19 12,013,192 (GRCm39) missense probably benign 0.01
R5518:Or4d11 UTSW 19 12,013,429 (GRCm39) missense probably damaging 0.97
R5729:Or4d11 UTSW 19 12,013,272 (GRCm39) missense probably damaging 0.99
R6151:Or4d11 UTSW 19 12,014,100 (GRCm39) missense probably benign 0.00
R6708:Or4d11 UTSW 19 12,014,103 (GRCm39) start codon destroyed probably null 1.00
R6723:Or4d11 UTSW 19 12,013,639 (GRCm39) missense probably damaging 1.00
R7103:Or4d11 UTSW 19 12,013,752 (GRCm39) missense probably damaging 0.99
R7385:Or4d11 UTSW 19 12,013,363 (GRCm39) missense probably benign 0.39
Predicted Primers PCR Primer
(F):5'- CATGATGGTCACATAGTGCAGGGG -3'
(R):5'- TTCGATGGAGCTGAGAAATGACACC -3'

Sequencing Primer
(F):5'- GGCCATGTATCGATCAAATGC -3'
(R):5'- CTGAGAAATGACACCAGAGTAAAAG -3'
Posted On 2013-07-11