Mutagenetix > Incidental Mutation

Incidental Mutation 'R7103:Slc16a4'

550977

Institutional Source

Beutler Lab

Gene Symbol

Slc16a4

Ensembl Gene

ENSMUSG00000027896

Gene Name

solute carrier family 16 (monocarboxylic acid transporters), member 4

Synonyms

MMRRC Submission

045195-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7103 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

107291230-107312115 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 107311471 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 463 (S463P)

Ref Sequence

ENSEMBL: ENSMUSP00000029502 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000029502] [ENSMUST00000106723]

AlphaFold

Q8R0M8

Predicted Effect

probably damaging
Transcript: ENSMUST00000029502
AA Change: S463P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000029502
Gene: ENSMUSG00000027896
AA Change: S463P

Domain	Start	End	E-Value	Type
Pfam:MFS_1	27	373	8.2e-26	PFAM
Pfam:MFS_1	305	499	2e-17	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000106723

SMART Domains

Protein: ENSMUSP00000102334
Gene: ENSMUSG00000027896

Domain	Start	End	E-Value	Type
Pfam:MFS_1	27	375	2.1e-28	PFAM
Pfam:MFS_1	327	462	3.6e-11	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

98% (61/62)

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts2	A	G	11: 50,737,354 (GRCm38)	T294A	probably damaging	Het
Adamtsl2	G	A	2: 27,107,461 (GRCm38)	V893I	probably damaging	Het
Amph	T	A	13: 19,149,738 (GRCm38)	D656E	probably benign	Het
Aoah	T	C	13: 21,023,315 (GRCm38)	F568S	probably damaging	Het
Atr	G	A	9: 95,865,372 (GRCm38)	G236S	probably damaging	Het
Brd3	T	A	2: 27,450,394 (GRCm38)	Q601L	probably damaging	Het
Ccar2	T	C	14: 70,141,977 (GRCm38)	E524G	probably damaging	Het
Cog2	T	C	8: 124,541,114 (GRCm38)		probably null	Het
Csnka2ip	C	A	16: 64,478,757 (GRCm38)	V415F	unknown	Het
Dmp1	A	T	5: 104,211,863 (GRCm38)	D135V	probably damaging	Het
Dtna	T	C	18: 23,653,379 (GRCm38)		probably null	Het
Endou	A	G	15: 97,718,929 (GRCm38)	S238P	probably damaging	Het
Ep400	T	A	5: 110,733,785 (GRCm38)	E779D	unknown	Het
Fcgbp	A	G	7: 28,084,962 (GRCm38)	E149G	probably benign	Het
G6pc	C	A	11: 101,374,587 (GRCm38)		probably null	Het
Gm13119	C	T	4: 144,363,727 (GRCm38)	R446C	probably benign	Het
Gm9573	C	A	17: 35,621,540 (GRCm38)	A585S	unknown	Het
Gmeb1	T	C	4: 132,234,868 (GRCm38)	H160R	probably damaging	Het
Gramd1b	T	C	9: 40,401,606 (GRCm38)	Y22C	unknown	Het
Hcrtr2	C	T	9: 76,254,511 (GRCm38)	G199D	probably benign	Het
Hoxb2	T	C	11: 96,353,621 (GRCm38)	F353L	possibly damaging	Het
Itpr2	C	A	6: 146,325,074 (GRCm38)	V1391F	probably damaging	Het
Jakmip2	T	A	18: 43,540,583 (GRCm38)		probably null	Het
Kcnmb4	T	C	10: 116,473,259 (GRCm38)	Y88C	possibly damaging	Het
Kif1a	T	C	1: 93,077,785 (GRCm38)	Y89C	probably damaging	Het
Kif23	T	A	9: 61,919,892 (GRCm38)	K892N	probably damaging	Het
Lama3	T	A	18: 12,531,879 (GRCm38)	S646T	probably benign	Het
Lig3	T	A	11: 82,797,312 (GRCm38)	M709K	probably benign	Het
Mgea5	G	A	19: 45,783,166 (GRCm38)		probably benign	Het
Mindy3	C	A	2: 12,401,074 (GRCm38)	A137S	possibly damaging	Het
Mis18bp1	T	C	12: 65,149,283 (GRCm38)	E569G	possibly damaging	Het
Misp	T	A	10: 79,827,165 (GRCm38)	L472Q	probably damaging	Het
Mrps5	A	T	2: 127,601,410 (GRCm38)	T303S	probably damaging	Het
Msh3	T	G	13: 92,274,800 (GRCm38)	I630L	probably benign	Het
Myo16	A	G	8: 10,569,673 (GRCm38)	Y1408C	unknown	Het
N4bp2	T	C	5: 65,806,846 (GRCm38)	V746A	probably benign	Het
Olfr1225	A	G	2: 89,170,483 (GRCm38)	I243T	possibly damaging	Het
Olfr1423	A	G	19: 12,036,388 (GRCm38)	M118T	probably damaging	Het
Olfr477	A	G	7: 107,990,598 (GRCm38)	T78A	possibly damaging	Het
Ostf1	C	T	19: 18,596,351 (GRCm38)	M44I	probably null	Het
Pik3c2b	T	G	1: 133,105,974 (GRCm38)	L1572R	probably damaging	Het
Pilra	T	C	5: 137,831,226 (GRCm38)	D192G	possibly damaging	Het
Pkhd1l1	A	G	15: 44,573,631 (GRCm38)	I3462V	probably benign	Het
Plekhh1	A	G	12: 79,066,655 (GRCm38)	D619G	probably benign	Het
Ptprb	T	A	10: 116,338,813 (GRCm38)	Y797N	probably damaging	Het
Rb1	T	C	14: 73,262,644 (GRCm38)	D521G	probably damaging	Het
Rnf17	T	G	14: 56,471,306 (GRCm38)	F728V	possibly damaging	Het
Slc4a1	A	T	11: 102,353,867 (GRCm38)	I634K	probably damaging	Het
Slc4a1ap	T	C	5: 31,543,857 (GRCm38)	V634A	probably benign	Het
Spam1	A	G	6: 24,800,584 (GRCm38)	M441V	probably benign	Het
Teddm3	A	C	16: 21,152,979 (GRCm38)	L280*	probably null	Het
Tmem231	T	C	8: 111,918,885 (GRCm38)		probably null	Het
Tom1l1	T	C	11: 90,671,081 (GRCm38)		probably null	Het
Topors	C	T	4: 40,261,706 (GRCm38)	G526D	probably benign	Het
Trpm6	A	T	19: 18,813,547 (GRCm38)	I649F	possibly damaging	Het
Ttc16	T	A	2: 32,774,428 (GRCm38)	M66L	probably benign	Het
Tubgcp6	A	G	15: 89,101,029 (GRCm38)	F1619L	probably damaging	Het
Vps13d	G	T	4: 145,115,492 (GRCm38)	A2619E		Het
Vps8	G	A	16: 21,526,441 (GRCm38)	R838H	probably damaging	Het
Vwde	T	A	6: 13,215,800 (GRCm38)	M86L	probably benign	Het
Zfp64	A	T	2: 168,926,437 (GRCm38)	D418E	probably benign	Het
Zfp952	C	T	17: 33,003,632 (GRCm38)	P362S	possibly damaging	Het
Zglp1	T	C	9: 21,066,072 (GRCm38)	E149G	probably benign	Het

Other mutations in Slc16a4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01065:Slc16a4	APN	3	107,303,100 (GRCm38)	missense	possibly damaging	0.67
IGL01311:Slc16a4	APN	3	107,292,505 (GRCm38)	missense	possibly damaging	0.83
IGL01509:Slc16a4	APN	3	107,311,434 (GRCm38)	critical splice acceptor site	probably null
IGL01780:Slc16a4	APN	3	107,303,099 (GRCm38)	missense	probably benign	0.00
IGL02294:Slc16a4	APN	3	107,301,068 (GRCm38)	missense	probably benign	0.00
IGL02350:Slc16a4	APN	3	107,303,099 (GRCm38)	missense	probably benign	0.00
IGL02357:Slc16a4	APN	3	107,303,099 (GRCm38)	missense	probably benign	0.00
IGL02792:Slc16a4	APN	3	107,298,877 (GRCm38)	missense	probably benign
IGL02873:Slc16a4	APN	3	107,300,795 (GRCm38)	missense	probably benign	0.00
IGL03001:Slc16a4	APN	3	107,311,542 (GRCm38)	missense	possibly damaging	0.91
IGL03002:Slc16a4	APN	3	107,300,786 (GRCm38)	missense	probably benign	0.07
R0370:Slc16a4	UTSW	3	107,301,097 (GRCm38)	missense	possibly damaging	0.66
R0525:Slc16a4	UTSW	3	107,297,939 (GRCm38)	splice site	probably benign
R1192:Slc16a4	UTSW	3	107,298,873 (GRCm38)	missense	probably benign	0.07
R1458:Slc16a4	UTSW	3	107,300,932 (GRCm38)	missense	probably benign	0.00
R1939:Slc16a4	UTSW	3	107,301,001 (GRCm38)	missense	probably benign	0.00
R2061:Slc16a4	UTSW	3	107,300,711 (GRCm38)	missense	probably benign	0.00
R2098:Slc16a4	UTSW	3	107,300,847 (GRCm38)	nonsense	probably null
R2102:Slc16a4	UTSW	3	107,304,503 (GRCm38)	splice site	probably null
R3411:Slc16a4	UTSW	3	107,300,872 (GRCm38)	missense	probably benign
R4983:Slc16a4	UTSW	3	107,300,860 (GRCm38)	missense	probably benign	0.00
R5394:Slc16a4	UTSW	3	107,292,442 (GRCm38)	missense	probably benign
R5804:Slc16a4	UTSW	3	107,298,964 (GRCm38)	missense	probably benign	0.04
R6077:Slc16a4	UTSW	3	107,301,065 (GRCm38)	missense	possibly damaging	0.91
R6626:Slc16a4	UTSW	3	107,301,196 (GRCm38)	missense	possibly damaging	0.95
R6693:Slc16a4	UTSW	3	107,303,064 (GRCm38)	missense	probably damaging	1.00
R6811:Slc16a4	UTSW	3	107,298,917 (GRCm38)	missense	probably benign	0.06
R6823:Slc16a4	UTSW	3	107,311,498 (GRCm38)	missense	probably benign	0.02
R6982:Slc16a4	UTSW	3	107,299,273 (GRCm38)	missense	probably benign	0.01
R7050:Slc16a4	UTSW	3	107,300,832 (GRCm38)	missense	probably benign
R7608:Slc16a4	UTSW	3	107,303,127 (GRCm38)	missense	probably damaging	1.00
R7623:Slc16a4	UTSW	3	107,297,981 (GRCm38)	missense	possibly damaging	0.71
R8013:Slc16a4	UTSW	3	107,311,478 (GRCm38)	missense	probably damaging	1.00
R8014:Slc16a4	UTSW	3	107,311,478 (GRCm38)	missense	probably damaging	1.00
R8713:Slc16a4	UTSW	3	107,311,585 (GRCm38)	makesense	probably null
R8876:Slc16a4	UTSW	3	107,300,785 (GRCm38)	missense	probably benign	0.12
R9266:Slc16a4	UTSW	3	107,292,472 (GRCm38)	missense	probably benign	0.10
R9661:Slc16a4	UTSW	3	107,306,043 (GRCm38)	missense	probably benign
X0018:Slc16a4	UTSW	3	107,300,815 (GRCm38)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- AAGCCCTATTTAAGTCCAATGGC -3'
(R):5'- AGTTGACATTCCTGGCAGTGC -3'

Sequencing Primer
(F):5'- GTCCAATGGCTCACAATATGGACTG -3'
(R):5'- CATTCCTGGCAGTGCTAAGAAAG -3'

Posted On

2019-05-15