Incidental Mutation 'R7107:Slc35f6'
ID551226
Institutional Source Beutler Lab
Gene Symbol Slc35f6
Ensembl Gene ENSMUSG00000029175
Gene Namesolute carrier family 35, member F6
SynonymsTango9, 5730478O19Rik, 4930471M23Rik, p40
MMRRC Submission
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R7107 (G1)
Quality Score225.009
Status Validated
Chromosome5
Chromosomal Location30647933-30659729 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 30656777 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Asparagine at position 189 (I189N)
Ref Sequence ENSEMBL: ENSMUSP00000058680 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000062962] [ENSMUST00000124474] [ENSMUST00000143867] [ENSMUST00000196740]
Predicted Effect probably damaging
Transcript: ENSMUST00000062962
AA Change: I189N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000058680
Gene: ENSMUSG00000029175
AA Change: I189N

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:EamA 27 160 2.5e-9 PFAM
Pfam:Nuc_sug_transp 43 226 1.7e-12 PFAM
Pfam:SLC35F 54 233 8.8e-14 PFAM
transmembrane domain 259 281 N/A INTRINSIC
transmembrane domain 301 323 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000124474
SMART Domains Protein: ENSMUSP00000120986
Gene: ENSMUSG00000029175

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000143867
SMART Domains Protein: ENSMUSP00000122703
Gene: ENSMUSG00000029175

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000196740
AA Change: I136N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000142761
Gene: ENSMUSG00000029175
AA Change: I136N

DomainStartEndE-ValueType
Pfam:TPT 5 104 1.1e-4 PFAM
Pfam:EamA 7 107 4.2e-8 PFAM
Pfam:Nuc_sug_transp 21 175 1.6e-10 PFAM
Pfam:DUF914 30 179 9.3e-11 PFAM
transmembrane domain 206 228 N/A INTRINSIC
transmembrane domain 248 270 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000199052
AA Change: I12N
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency 99% (78/79)
Allele List at MGI
Other mutations in this stock
Total: 80 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700014D04Rik T A 13: 59,742,183 R608* probably null Het
4922502D21Rik A G 6: 129,322,952 C188R probably damaging Het
Abca8b A G 11: 109,976,473 L253S probably damaging Het
Adgrv1 T C 13: 81,578,142 E588G probably benign Het
Ahcy G A 2: 155,068,973 A25V probably damaging Het
Ank2 A C 3: 127,003,982 L710R probably damaging Het
Ap1b1 A G 11: 5,039,558 T824A probably benign Het
Arap2 T A 5: 62,606,208 H1531L probably damaging Het
B3gnt7 T C 1: 86,305,773 L247P probably damaging Het
Bcl6b A G 11: 70,226,570 C409R probably damaging Het
Bicdl1 T C 5: 115,670,170 H301R probably benign Het
Casc3 T A 11: 98,827,587 I491N possibly damaging Het
Ccdc92b T A 11: 74,630,061 L63Q probably damaging Het
Cep250 A G 2: 155,995,394 T2319A probably benign Het
Chd1 T C 17: 15,761,366 S1356P probably damaging Het
Chd8 A G 14: 52,212,672 S1542P probably benign Het
Cntnap4 A G 8: 112,815,488 D751G probably damaging Het
Cpsf4l G A 11: 113,702,489 R90C possibly damaging Het
Defa21 G A 8: 21,025,708 A41T probably damaging Het
Dennd4a G T 9: 64,894,399 L941F possibly damaging Het
Dnah12 G A 14: 26,778,912 probably null Het
Dtx4 A T 19: 12,473,260 C529* probably null Het
Entpd3 A G 9: 120,560,599 Y317C probably damaging Het
Erp29 T A 5: 121,445,318 I182F possibly damaging Het
Fam161a A G 11: 23,023,452 R445G possibly damaging Het
Fam214b A T 4: 43,036,434 V99E probably benign Het
Fam76a T A 4: 132,903,921 M238L possibly damaging Het
Fn1 T C 1: 71,627,249 Y875C probably damaging Het
Gnb2 A G 5: 137,530,182 probably null Het
Hspg2 T C 4: 137,510,652 S229P probably damaging Het
Ighv6-6 A G 12: 114,434,970 S59P probably damaging Het
Itpkc C A 7: 27,228,277 A71S probably benign Het
Kcnk10 G A 12: 98,518,743 R45* probably null Het
Krcc1 A G 6: 71,284,214 S77G probably benign Het
Lelp1 G A 3: 92,135,514 T76I unknown Het
Lifr A T 15: 7,178,940 I600F possibly damaging Het
Lrrk1 T A 7: 66,287,443 D987V possibly damaging Het
Mfsd7a T A 5: 108,448,715 probably null Het
Muc16 C T 9: 18,637,298 D5900N probably benign Het
Muc6 AGGCGCAGAAACCCTGGC AGGC 7: 141,634,450 probably null Het
Myo9a A G 9: 59,870,815 I1285V probably benign Het
Ndel1 T C 11: 68,822,648 D321G possibly damaging Het
Nlrp4b T C 7: 10,715,217 V449A probably damaging Het
Olfr1386 T A 11: 49,470,434 Y94* probably null Het
Olfr1495 A G 19: 13,769,161 E273G probably benign Het
Olfr195 A C 16: 59,148,916 D22A probably benign Het
Olfr458 T C 6: 42,460,554 N155S possibly damaging Het
Olfr639 A T 7: 104,012,282 L140Q probably benign Het
Osbpl1a G A 18: 12,841,253 R459* probably null Het
Pabpc1l A C 2: 164,042,479 T379P probably damaging Het
Pde2a A T 7: 101,421,968 Q15L probably benign Het
Pdk1 A G 2: 71,895,741 N331S probably benign Het
Pfdn1 A T 18: 36,451,466 probably null Het
Pnliprp1 T A 19: 58,729,150 L9H probably damaging Het
Prl7a2 A T 13: 27,659,093 D242E possibly damaging Het
Prmt9 T A 8: 77,568,251 I408N possibly damaging Het
Psme4 G A 11: 30,848,105 R1366H probably benign Het
Pstpip1 A T 9: 56,128,650 D393V probably damaging Het
Rab5b A G 10: 128,683,193 probably null Het
Rap1gap2 G A 11: 74,393,119 R618C probably damaging Het
Rin1 A G 19: 5,050,773 probably benign Het
Sall3 G A 18: 80,973,754 P320S probably benign Het
Sdk1 A G 5: 142,081,716 T1124A probably damaging Het
Sirpb1c T A 3: 15,838,777 T88S possibly damaging Het
Spsb2 A T 6: 124,810,281 Q226L probably benign Het
Stab2 T C 10: 86,905,592 D1221G possibly damaging Het
Sugp1 G A 8: 70,070,150 R500H probably benign Het
Syne1 A G 10: 5,132,078 Y849H probably damaging Het
Tbck T A 3: 132,722,331 I249N possibly damaging Het
Tdrd6 A C 17: 43,624,204 F1984L probably benign Het
Tnxb T A 17: 34,671,340 V219E unknown Het
Tpst1 T A 5: 130,114,503 V294D probably damaging Het
Treml1 A G 17: 48,360,219 Q44R probably damaging Het
Trrap G A 5: 144,797,135 A933T probably benign Het
Vars2 A G 17: 35,658,250 L853P probably damaging Het
Vmn1r10 A T 6: 57,113,630 N69I possibly damaging Het
Vmn1r179 T A 7: 23,928,394 Y3* probably null Het
Vmn2r38 T A 7: 9,090,729 Y498F probably benign Het
Zc3h11a T C 1: 133,638,917 T179A probably damaging Het
Zmym2 A G 14: 56,902,712 T3A probably benign Het
Other mutations in Slc35f6
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4596:Slc35f6 UTSW 5 30648062 missense probably damaging 0.99
R4665:Slc35f6 UTSW 5 30655613 missense probably damaging 0.99
R4666:Slc35f6 UTSW 5 30655613 missense probably damaging 0.99
R4994:Slc35f6 UTSW 5 30648083 missense probably damaging 1.00
R6500:Slc35f6 UTSW 5 30656820 missense possibly damaging 0.90
R6682:Slc35f6 UTSW 5 30657420 missense possibly damaging 0.81
R7117:Slc35f6 UTSW 5 30657707 missense probably damaging 1.00
R7219:Slc35f6 UTSW 5 30657452 missense probably benign 0.02
Predicted Primers PCR Primer
(F):5'- TGGACCTTCTGGAAGCACAG -3'
(R):5'- GGCTCATTCTATCAAGTCCCCAG -3'

Sequencing Primer
(F):5'- TTCTGGAAGCACAGGCCTG -3'
(R):5'- AGTCCCCAGCCCACTCTG -3'
Posted On2019-05-15