Mutagenetix > Incidental Mutation

Incidental Mutation 'R7108:Prkcz'

551309

Institutional Source

Beutler Lab

Gene Symbol

Prkcz

Ensembl Gene

ENSMUSG00000029053

Gene Name

protein kinase C, zeta

Synonyms

Pkcz, zetaPKC, aPKCzeta

MMRRC Submission

045200-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7108 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

155260129-155361361 bp(-) (GRCm38)

Type of Mutation

nonsense

DNA Base Change (assembly)

G to A at 155286793 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Stop codon at position 321 (Q321*)

Ref Sequence

ENSEMBL: ENSMUSP00000030922 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030922] [ENSMUST00000103178] [ENSMUST00000123652] [ENSMUST00000131975]

AlphaFold

Q02956

Predicted Effect

probably null
Transcript: ENSMUST00000030922
AA Change: Q321*

SMART Domains

Protein: ENSMUSP00000030922
Gene: ENSMUSG00000029053
AA Change: Q321*

Domain	Start	End	E-Value	Type
PB1	15	98	4.55e-24	SMART
C1	131	180	6.73e-17	SMART
S_TKc	252	518	5.49e-94	SMART
S_TK_X	519	582	2.58e-21	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000103178
AA Change: Q138*

SMART Domains

Protein: ENSMUSP00000099467
Gene: ENSMUSG00000029053
AA Change: Q138*

Domain	Start	End	E-Value	Type
S_TKc	69	335	5.49e-94	SMART
S_TK_X	336	399	2.58e-21	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000123652

Predicted Effect

probably benign
Transcript: ENSMUST00000131975

SMART Domains

Protein: ENSMUSP00000116042
Gene: ENSMUSG00000029053

Domain	Start	End	E-Value	Type
C1	23	72	6.73e-17	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.0%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Protein kinase C (PKC) zeta is a member of the PKC family of serine/threonine kinases which are involved in a variety of cellular processes such as proliferation, differentiation and secretion. Unlike the classical PKC isoenzymes which are calcium-dependent, PKC zeta exhibits a kinase activity which is independent of calcium and diacylglycerol but not of phosphatidylserine. Furthermore, it is insensitive to typical PKC inhibitors and cannot be activated by phorbol ester. Unlike the classical PKC isoenzymes, it has only a single zinc finger module. These structural and biochemical properties indicate that the zeta subspecies is related to, but distinct from other isoenzymes of PKC. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
PHENOTYPE: Young, not mature, homozygous null mice have reduced B cell numbers and abnormal secondary lymph organ structure. Young mice have fewer Peyer's patches, poor delineation of B & T cell zones, and fewer follicles of small size. Spleens have less prominent B cell follicles and abnormal marginal zones. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 80 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2810021J22Rik	T	C	11: 58,880,924 (GRCm38)	S411P	probably damaging	Het
4930503L19Rik	A	T	18: 70,468,476 (GRCm38)	Y112N	probably benign	Het
Abcd2	A	T	15: 91,191,274 (GRCm38)	V112E	probably benign	Het
Acadm	A	T	3: 153,925,800 (GRCm38)	Y353*	probably null	Het
Adra2c	A	G	5: 35,279,998 (GRCm38)	D38G	probably benign	Het
Ankrd10	C	T	8: 11,612,624 (GRCm38)	G370R	probably damaging	Het
Arfgef2	T	A	2: 166,873,608 (GRCm38)	N1324K	possibly damaging	Het
Atp6v1b2	A	G	8: 69,102,501 (GRCm38)	T172A	probably damaging	Het
BC003331	T	C	1: 150,382,290 (GRCm38)	Y198C	probably benign	Het
Bloc1s1	T	A	10: 128,922,723 (GRCm38)	K22M	possibly damaging	Het
Brpf3	A	G	17: 28,817,125 (GRCm38)	T599A	probably benign	Het
Cacna1e	TTCCAGTCTC	TTC	1: 154,468,995 (GRCm38)		probably null	Het
Casc1	G	A	6: 145,185,865 (GRCm38)	Q351*	probably null	Het
Ccdc186	T	C	19: 56,798,760 (GRCm38)	D592G	probably damaging	Het
Cfap161	A	T	7: 83,793,310 (GRCm38)	D98E	possibly damaging	Het
Cfi	G	A	3: 129,875,016 (GRCm38)	V564M	probably damaging	Het
Cilp2	T	A	8: 69,881,129 (GRCm38)	Q1073L	probably damaging	Het
Cox6b1	A	G	7: 30,623,504 (GRCm38)	C40R	possibly damaging	Het
Cyp3a59	A	T	5: 146,096,333 (GRCm38)	M172L	probably benign	Het
Cyth1	T	C	11: 118,182,913 (GRCm38)	D198G	probably damaging	Het
Daam2	T	C	17: 49,460,674 (GRCm38)	D963G	probably damaging	Het
Ddi2	A	T	4: 141,705,937 (GRCm38)	D209E	probably benign	Het
Dnah12	G	A	14: 26,778,912 (GRCm38)		probably null	Het
Dpagt1	G	T	9: 44,327,021 (GRCm38)		probably benign	Het
Drc3	T	A	11: 60,370,554 (GRCm38)	F177Y	probably benign	Het
Dsg2	T	C	18: 20,601,863 (GRCm38)	V966A	probably damaging	Het
E430018J23Rik	A	G	7: 127,391,523 (GRCm38)	S431P	probably benign	Het
E4f1	A	G	17: 24,444,578 (GRCm38)	V633A	probably damaging	Het
Eif2ak2	T	A	17: 78,858,536 (GRCm38)	R411*	probably null	Het
Frem2	T	C	3: 53,653,513 (GRCm38)	E1191G	probably damaging	Het
Fry	T	C	5: 150,395,786 (GRCm38)	V972A	probably damaging	Het
Fry	T	A	5: 150,491,090 (GRCm38)	C467S		Het
Fscn1	T	C	5: 142,960,515 (GRCm38)	Y23H	probably damaging	Het
Gm16506	T	A	14: 43,724,302 (GRCm38)	I163F		Het
Gm21103	T	C	14: 6,303,774 (GRCm38)	Y92C	probably damaging	Het
Golgb1	A	G	16: 36,913,721 (GRCm38)	H1151R	probably benign	Het
Gprc5c	T	C	11: 114,864,282 (GRCm38)	Y262H	probably damaging	Het
Hc	G	T	2: 35,039,694 (GRCm38)	N245K	probably benign	Het
Hps6	T	A	19: 46,005,490 (GRCm38)	L622Q	probably damaging	Het
Hsd17b1	T	C	11: 101,079,209 (GRCm38)	Y156H	probably damaging	Het
Ireb2	T	A	9: 54,906,641 (GRCm38)	F799L	probably damaging	Het
Irf1	A	G	11: 53,774,412 (GRCm38)	D205G	probably damaging	Het
Kif12	A	T	4: 63,171,205 (GRCm38)	F103L	probably benign	Het
Krt12	C	T	11: 99,416,052 (GRCm38)	V475M	unknown	Het
Lca5	T	A	9: 83,423,169 (GRCm38)	T195S	probably benign	Het
Lrrc17	T	C	5: 21,575,339 (GRCm38)	V437A	possibly damaging	Het
Malt1	G	T	18: 65,464,051 (GRCm38)	D468Y	probably damaging	Het
Man2b2	C	T	5: 36,815,485 (GRCm38)	A562T	probably benign	Het
Mrc1	C	T	2: 14,304,146 (GRCm38)	Q794*	probably null	Het
Muc16	T	A	9: 18,655,233 (GRCm38)	I1997L	unknown	Het
Muc6	AGGCGCAGAAACCCTGGC	AGGC	7: 141,634,450 (GRCm38)		probably null	Het
Mycbp2	A	T	14: 103,122,603 (GRCm38)	F4518Y	probably damaging	Het
Myo5a	T	A	9: 75,129,992 (GRCm38)	I159N	probably damaging	Het
Nat1	T	C	8: 67,491,020 (GRCm38)	V19A	probably benign	Het
Ndst4	A	G	3: 125,561,471 (GRCm38)	T343A	probably damaging	Het
Nlrp9b	A	T	7: 20,045,930 (GRCm38)	L839F	probably damaging	Het
Nxnl1	A	G	8: 71,566,554 (GRCm38)	I9T	probably benign	Het
Olfr1351	C	A	10: 79,017,649 (GRCm38)	S109*	probably null	Het
Olfr331	T	A	11: 58,502,554 (GRCm38)	M7L	probably benign	Het
Olfr364-ps1	C	T	2: 37,146,260 (GRCm38)	T16I	probably benign	Het
Olfr548-ps1	A	T	7: 102,541,992 (GRCm38)	I19F	probably damaging	Het
Olfr693	G	A	7: 106,678,048 (GRCm38)	A146V	probably benign	Het
Pou5f2	T	C	13: 78,025,265 (GRCm38)	S109P	possibly damaging	Het
Prr18	G	T	17: 8,341,531 (GRCm38)	R173L	probably damaging	Het
Ralgapb	A	T	2: 158,494,662 (GRCm38)	I1407F	probably damaging	Het
Ralgapb	T	C	2: 158,492,460 (GRCm38)	Y1364H	probably damaging	Het
Sacs	T	A	14: 61,211,009 (GRCm38)	Y3501*	probably null	Het
Sall3	G	A	18: 80,973,754 (GRCm38)	P320S	probably benign	Het
Scn8a	A	T	15: 101,039,778 (GRCm38)	H1676L	probably benign	Het
Shmt1	T	C	11: 60,798,644 (GRCm38)	D178G	probably damaging	Het
Slmap	T	C	14: 26,422,521 (GRCm38)	K737R	probably benign	Het
Ssh2	G	A	11: 77,454,794 (GRCm38)	V1202I	probably benign	Het
Stard7	A	G	2: 127,295,494 (GRCm38)	D288G	possibly damaging	Het
Tek	A	T	4: 94,853,487 (GRCm38)	D827V	probably damaging	Het
Tfap2e	A	G	4: 126,720,563 (GRCm38)	L276P	probably damaging	Het
Tns3	T	C	11: 8,437,251 (GRCm38)	N1312S	probably benign	Het
Tubd1	T	A	11: 86,557,805 (GRCm38)	S315T	probably damaging	Het
Ube2f	T	A	1: 91,265,219 (GRCm38)	C50*	probably null	Het
Vmn2r109	T	C	17: 20,564,744 (GRCm38)	I5V	probably benign	Het
Vmn2r39	T	C	7: 9,023,668 (GRCm38)	T445A	probably damaging	Het

Other mutations in Prkcz

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00501:Prkcz	APN	4	155,294,401 (GRCm38)	splice site	probably benign
IGL02114:Prkcz	APN	4	155,271,590 (GRCm38)	missense	probably damaging	1.00
IGL02582:Prkcz	APN	4	155,271,256 (GRCm38)	missense	probably damaging	1.00
IGL03010:Prkcz	APN	4	155,286,805 (GRCm38)	missense	probably damaging	1.00
IGL03199:Prkcz	APN	4	155,272,984 (GRCm38)	missense	possibly damaging	0.85
IGL03225:Prkcz	APN	4	155,268,195 (GRCm38)	missense	probably damaging	0.99
IGL03229:Prkcz	APN	4	155,262,506 (GRCm38)	missense	probably benign	0.19
IGL03299:Prkcz	APN	4	155,286,790 (GRCm38)	missense	possibly damaging	0.78
PIT4403001:Prkcz	UTSW	4	155,293,156 (GRCm38)	critical splice donor site	probably null
R0389:Prkcz	UTSW	4	155,269,140 (GRCm38)	missense	probably damaging	1.00
R0443:Prkcz	UTSW	4	155,269,140 (GRCm38)	missense	probably damaging	1.00
R1666:Prkcz	UTSW	4	155,289,751 (GRCm38)	missense	probably damaging	1.00
R1668:Prkcz	UTSW	4	155,289,751 (GRCm38)	missense	probably damaging	1.00
R1686:Prkcz	UTSW	4	155,271,256 (GRCm38)	missense	probably damaging	1.00
R1710:Prkcz	UTSW	4	155,262,512 (GRCm38)	missense	probably damaging	1.00
R2025:Prkcz	UTSW	4	155,289,710 (GRCm38)	missense	probably damaging	1.00
R3162:Prkcz	UTSW	4	155,290,524 (GRCm38)	missense	probably benign	0.00
R3162:Prkcz	UTSW	4	155,290,524 (GRCm38)	missense	probably benign	0.00
R4399:Prkcz	UTSW	4	155,269,077 (GRCm38)	missense	possibly damaging	0.86
R4780:Prkcz	UTSW	4	155,289,702 (GRCm38)	missense	probably damaging	1.00
R4923:Prkcz	UTSW	4	155,357,489 (GRCm38)	missense	probably damaging	1.00
R5160:Prkcz	UTSW	4	155,293,232 (GRCm38)	missense	probably benign	0.22
R5510:Prkcz	UTSW	4	155,272,936 (GRCm38)	splice site	probably null
R6278:Prkcz	UTSW	4	155,268,195 (GRCm38)	missense	probably damaging	0.99
R6290:Prkcz	UTSW	4	155,356,499 (GRCm38)	missense	probably damaging	1.00
R6881:Prkcz	UTSW	4	155,269,056 (GRCm38)	missense	possibly damaging	0.90
R7055:Prkcz	UTSW	4	155,289,634 (GRCm38)	missense	probably benign	0.01
R7241:Prkcz	UTSW	4	155,269,059 (GRCm38)	missense	probably benign	0.00
R7355:Prkcz	UTSW	4	155,357,496 (GRCm38)	missense	probably damaging	1.00
R7466:Prkcz	UTSW	4	155,271,602 (GRCm38)	missense	probably damaging	1.00
R7522:Prkcz	UTSW	4	155,271,285 (GRCm38)	missense	probably damaging	1.00
R7618:Prkcz	UTSW	4	155,262,482 (GRCm38)	missense	probably damaging	1.00
R7753:Prkcz	UTSW	4	155,272,968 (GRCm38)	missense	possibly damaging	0.61
R8079:Prkcz	UTSW	4	155,357,505 (GRCm38)	missense	probably damaging	1.00
R8407:Prkcz	UTSW	4	155,268,216 (GRCm38)	missense	probably damaging	0.99
R8523:Prkcz	UTSW	4	155,262,511 (GRCm38)	missense	probably damaging	1.00
R8824:Prkcz	UTSW	4	155,344,828 (GRCm38)	start gained	probably benign
R9753:Prkcz	UTSW	4	155,293,202 (GRCm38)	missense	probably benign	0.01
X0067:Prkcz	UTSW	4	155,354,704 (GRCm38)	missense	probably benign	0.25
Z1176:Prkcz	UTSW	4	155,356,468 (GRCm38)	missense	probably damaging	1.00
Z1176:Prkcz	UTSW	4	155,354,680 (GRCm38)	missense	probably damaging	1.00
Z1177:Prkcz	UTSW	4	155,301,004 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACCTTTGGTCCCACGAATGG -3'
(R):5'- GAAGAAAGGCTTTCGTGTCTTG -3'

Sequencing Primer
(F):5'- GTGTGAAGTCTACTGCATATGACCC -3'
(R):5'- GCTTTCGTGTCTTGGCCCTG -3'

Posted On

2019-05-15