Incidental Mutation 'R7128:Brd10'
| ID |
552493 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Brd10
|
| Ensembl Gene |
ENSMUSG00000046138 |
| Gene Name |
bromodomain containing 10 |
| Synonyms |
9930021J03Rik, Gm9832 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.137)
|
| Stock # |
R7128 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
19 |
| Chromosomal Location |
29691802-29783389 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 29693881 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Alanine
at position 1871
(T1871A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000135473
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000177155]
|
| AlphaFold |
H3BKP8 |
| Predicted Effect |
|
| Predicted Effect |
|
| SMART Domains |
Protein: ENSMUSP00000135031
Gene: ENSMUSG00000046138
AA Change: T1170A
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
2 |
19 |
N/A |
INTRINSIC |
|
low complexity region
|
379 |
393 |
N/A |
INTRINSIC |
|
internal_repeat_1
|
397 |
526 |
2.65e-5 |
PROSPERO |
|
low complexity region
|
528 |
537 |
N/A |
INTRINSIC |
|
low complexity region
|
619 |
648 |
N/A |
INTRINSIC |
|
low complexity region
|
701 |
716 |
N/A |
INTRINSIC |
|
low complexity region
|
835 |
857 |
N/A |
INTRINSIC |
|
low complexity region
|
880 |
896 |
N/A |
INTRINSIC |
|
low complexity region
|
965 |
978 |
N/A |
INTRINSIC |
|
internal_repeat_1
|
999 |
1143 |
2.65e-5 |
PROSPERO |
|
low complexity region
|
1220 |
1226 |
N/A |
INTRINSIC |
|
low complexity region
|
1246 |
1260 |
N/A |
INTRINSIC |
|
low complexity region
|
1286 |
1304 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000176773
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000177155
AA Change: T1871A
PolyPhen 2
Score 0.528 (Sensitivity: 0.88; Specificity: 0.90)
|
| SMART Domains |
Protein: ENSMUSP00000135473
Gene: ENSMUSG00000046138
AA Change: T1871A
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
4 |
66 |
N/A |
INTRINSIC |
|
BROMO
|
75 |
198 |
1.22e-3 |
SMART |
|
low complexity region
|
205 |
219 |
N/A |
INTRINSIC |
|
low complexity region
|
280 |
298 |
N/A |
INTRINSIC |
|
low complexity region
|
428 |
441 |
N/A |
INTRINSIC |
|
coiled coil region
|
606 |
638 |
N/A |
INTRINSIC |
|
low complexity region
|
655 |
689 |
N/A |
INTRINSIC |
|
coiled coil region
|
697 |
729 |
N/A |
INTRINSIC |
|
low complexity region
|
1079 |
1093 |
N/A |
INTRINSIC |
|
internal_repeat_1
|
1097 |
1226 |
1.32e-7 |
PROSPERO |
|
low complexity region
|
1228 |
1237 |
N/A |
INTRINSIC |
|
low complexity region
|
1319 |
1348 |
N/A |
INTRINSIC |
|
low complexity region
|
1401 |
1416 |
N/A |
INTRINSIC |
|
low complexity region
|
1535 |
1557 |
N/A |
INTRINSIC |
|
low complexity region
|
1580 |
1596 |
N/A |
INTRINSIC |
|
low complexity region
|
1665 |
1678 |
N/A |
INTRINSIC |
|
internal_repeat_1
|
1699 |
1843 |
1.32e-7 |
PROSPERO |
|
low complexity region
|
1920 |
1926 |
N/A |
INTRINSIC |
|
low complexity region
|
1946 |
1960 |
N/A |
INTRINSIC |
|
low complexity region
|
1986 |
2004 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.0%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 68 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adgb |
T |
C |
10: 10,347,985 (GRCm39) |
D25G |
probably benign |
Het |
| Ak9 |
T |
C |
10: 41,300,713 (GRCm39) |
V1641A |
unknown |
Het |
| Akirin2 |
T |
C |
4: 34,562,435 (GRCm39) |
I118T |
probably benign |
Het |
| Aldh1l1 |
G |
T |
6: 90,540,361 (GRCm39) |
Q215H |
probably benign |
Het |
| Arhgef26 |
T |
C |
3: 62,326,971 (GRCm39) |
F495L |
possibly damaging |
Het |
| Atg4a-ps |
T |
A |
3: 103,553,063 (GRCm39) |
R93* |
probably null |
Het |
| Catsper3 |
A |
G |
13: 55,946,662 (GRCm39) |
I120V |
probably benign |
Het |
| Cavin2 |
A |
G |
1: 51,328,579 (GRCm39) |
Q12R |
possibly damaging |
Het |
| Cenpf |
A |
T |
1: 189,417,188 (GRCm39) |
F39Y |
probably damaging |
Het |
| Chfr |
T |
C |
5: 110,291,502 (GRCm39) |
Y107H |
probably benign |
Het |
| Cmtm1 |
CGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGT |
CGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGT |
8: 105,036,102 (GRCm39) |
|
probably benign |
Het |
| Defb4 |
T |
A |
8: 19,251,220 (GRCm39) |
I29K |
possibly damaging |
Het |
| Dnah7c |
A |
G |
1: 46,566,645 (GRCm39) |
T619A |
probably benign |
Het |
| Duxf1 |
T |
C |
10: 58,059,479 (GRCm39) |
Q425R |
unknown |
Het |
| Emc3 |
A |
G |
6: 113,494,881 (GRCm39) |
L179P |
probably damaging |
Het |
| Eno3 |
G |
C |
11: 70,549,430 (GRCm39) |
V84L |
possibly damaging |
Het |
| Fam110a |
C |
T |
2: 151,812,642 (GRCm39) |
V43M |
probably damaging |
Het |
| Fbxo30 |
T |
A |
10: 11,165,860 (GRCm39) |
L194* |
probably null |
Het |
| Galnt14 |
T |
C |
17: 73,852,096 (GRCm39) |
T108A |
probably benign |
Het |
| Glipr2 |
T |
C |
4: 43,968,601 (GRCm39) |
I51T |
probably benign |
Het |
| Gm1527 |
C |
T |
3: 28,969,460 (GRCm39) |
S270F |
possibly damaging |
Het |
| Gm3336 |
A |
G |
8: 71,171,203 (GRCm39) |
M1V |
probably null |
Het |
| Gm4744 |
T |
C |
6: 40,927,310 (GRCm39) |
D15G |
|
Het |
| Gm4924 |
G |
A |
10: 82,214,533 (GRCm39) |
C777Y |
unknown |
Het |
| Gm5901 |
G |
A |
7: 105,027,408 (GRCm39) |
G306S |
probably damaging |
Het |
| Gon4l |
T |
A |
3: 88,802,999 (GRCm39) |
N1203K |
possibly damaging |
Het |
| Gpr161 |
A |
T |
1: 165,138,026 (GRCm39) |
Y204F |
possibly damaging |
Het |
| Igsf10 |
T |
C |
3: 59,236,326 (GRCm39) |
E1285G |
probably benign |
Het |
| Irx6 |
T |
C |
8: 93,403,994 (GRCm39) |
L187P |
probably damaging |
Het |
| Itgb1bp1 |
A |
G |
12: 21,322,089 (GRCm39) |
Y117H |
probably benign |
Het |
| Itln1 |
C |
A |
1: 171,358,143 (GRCm39) |
D202Y |
possibly damaging |
Het |
| Kctd9 |
T |
C |
14: 67,975,972 (GRCm39) |
S242P |
probably benign |
Het |
| Lrrk2 |
A |
G |
15: 91,686,088 (GRCm39) |
H2143R |
probably benign |
Het |
| Lynx1 |
G |
A |
15: 74,623,398 (GRCm39) |
R50* |
probably null |
Het |
| Lypd11 |
C |
T |
7: 24,425,424 (GRCm39) |
|
probably null |
Het |
| Map10 |
A |
G |
8: 126,398,592 (GRCm39) |
I662V |
probably benign |
Het |
| Mlxipl |
T |
C |
5: 135,162,705 (GRCm39) |
L691P |
probably damaging |
Het |
| Muc16 |
A |
G |
9: 18,554,300 (GRCm39) |
S3998P |
unknown |
Het |
| Nalcn |
A |
T |
14: 123,831,914 (GRCm39) |
V120E |
probably damaging |
Het |
| Nfat5 |
T |
C |
8: 108,085,323 (GRCm39) |
S539P |
probably benign |
Het |
| Olfml3 |
T |
C |
3: 103,644,484 (GRCm39) |
M62V |
probably benign |
Het |
| Orm3 |
T |
C |
4: 63,276,062 (GRCm39) |
V158A |
probably benign |
Het |
| Pakap |
T |
C |
4: 57,855,816 (GRCm39) |
S382P |
probably benign |
Het |
| Pced1b |
A |
T |
15: 97,282,479 (GRCm39) |
K173* |
probably null |
Het |
| Pdzd7 |
T |
C |
19: 45,016,388 (GRCm39) |
D911G |
probably damaging |
Het |
| Pkn3 |
A |
G |
2: 29,973,327 (GRCm39) |
D383G |
probably damaging |
Het |
| Pm20d1 |
A |
G |
1: 131,725,292 (GRCm39) |
E46G |
probably benign |
Het |
| Pyroxd2 |
A |
T |
19: 42,719,842 (GRCm39) |
S455T |
probably benign |
Het |
| Rmnd5b |
T |
A |
11: 51,515,364 (GRCm39) |
I301F |
possibly damaging |
Het |
| Rnf225 |
A |
G |
7: 12,661,911 (GRCm39) |
N30S |
probably benign |
Het |
| Shisal2a |
G |
T |
4: 108,225,100 (GRCm39) |
T154K |
probably benign |
Het |
| Slfn3 |
T |
A |
11: 83,105,721 (GRCm39) |
C573S |
probably benign |
Het |
| Smc6 |
A |
G |
12: 11,351,632 (GRCm39) |
E887G |
probably damaging |
Het |
| Sp140 |
A |
T |
1: 85,547,846 (GRCm39) |
D191V |
possibly damaging |
Het |
| Srf |
C |
T |
17: 46,866,372 (GRCm39) |
S128N |
possibly damaging |
Het |
| Sult6b1 |
T |
C |
17: 79,202,070 (GRCm39) |
D144G |
probably damaging |
Het |
| Syne1 |
G |
A |
10: 5,193,180 (GRCm39) |
A3956V |
probably damaging |
Het |
| Syt10 |
A |
T |
15: 89,698,314 (GRCm39) |
D343E |
probably damaging |
Het |
| Tgtp2 |
G |
A |
11: 48,950,135 (GRCm39) |
R146C |
possibly damaging |
Het |
| Tmcc3 |
A |
T |
10: 94,266,496 (GRCm39) |
|
probably benign |
Het |
| Tnfrsf1a |
A |
T |
6: 125,338,499 (GRCm39) |
T337S |
probably benign |
Het |
| Tns1 |
A |
T |
1: 74,034,463 (GRCm39) |
I144N |
|
Het |
| Trim11 |
A |
G |
11: 58,869,103 (GRCm39) |
E13G |
probably damaging |
Het |
| Trpm6 |
A |
T |
19: 18,789,137 (GRCm39) |
H569L |
possibly damaging |
Het |
| Ttbk2 |
T |
A |
2: 120,576,569 (GRCm39) |
I803L |
probably benign |
Het |
| Vmn1r21 |
G |
T |
6: 57,820,936 (GRCm39) |
N169K |
probably damaging |
Het |
| Vmn2r60 |
C |
T |
7: 41,844,536 (GRCm39) |
T633I |
probably damaging |
Het |
| Wt1 |
T |
C |
2: 104,957,670 (GRCm39) |
Y177H |
probably benign |
Het |
|
| Other mutations in Brd10 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01311:Brd10
|
APN |
19 |
29,731,420 (GRCm39) |
missense |
probably benign |
0.33 |
|
IGL01535:Brd10
|
APN |
19 |
29,731,212 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
IGL02019:Brd10
|
APN |
19 |
29,694,463 (GRCm39) |
missense |
probably benign |
0.28 |
|
IGL02034:Brd10
|
APN |
19 |
29,694,259 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
IGL03114:Brd10
|
APN |
19 |
29,694,532 (GRCm39) |
missense |
probably benign |
0.18 |
|
IGL03382:Brd10
|
APN |
19 |
29,694,676 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0020:Brd10
|
UTSW |
19 |
29,693,597 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0020:Brd10
|
UTSW |
19 |
29,693,597 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0142:Brd10
|
UTSW |
19 |
29,695,654 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R0178:Brd10
|
UTSW |
19 |
29,732,188 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0453:Brd10
|
UTSW |
19 |
29,731,068 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0730:Brd10
|
UTSW |
19 |
29,695,381 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0735:Brd10
|
UTSW |
19 |
29,695,038 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R0891:Brd10
|
UTSW |
19 |
29,695,053 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0894:Brd10
|
UTSW |
19 |
29,697,974 (GRCm39) |
splice site |
probably benign |
|
|
R1289:Brd10
|
UTSW |
19 |
29,700,852 (GRCm39) |
missense |
probably benign |
0.07 |
|
R1368:Brd10
|
UTSW |
19 |
29,693,796 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1387:Brd10
|
UTSW |
19 |
29,700,853 (GRCm39) |
missense |
probably benign |
0.15 |
|
R1483:Brd10
|
UTSW |
19 |
29,696,745 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R1526:Brd10
|
UTSW |
19 |
29,712,545 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1612:Brd10
|
UTSW |
19 |
29,695,245 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R1721:Brd10
|
UTSW |
19 |
29,720,998 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1764:Brd10
|
UTSW |
19 |
29,696,560 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R1822:Brd10
|
UTSW |
19 |
29,693,814 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1824:Brd10
|
UTSW |
19 |
29,693,814 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1859:Brd10
|
UTSW |
19 |
29,732,323 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R1868:Brd10
|
UTSW |
19 |
29,720,998 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1880:Brd10
|
UTSW |
19 |
29,695,523 (GRCm39) |
missense |
probably benign |
0.06 |
|
R1898:Brd10
|
UTSW |
19 |
29,712,532 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R1936:Brd10
|
UTSW |
19 |
29,731,077 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R1939:Brd10
|
UTSW |
19 |
29,731,077 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R1969:Brd10
|
UTSW |
19 |
29,694,075 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R2153:Brd10
|
UTSW |
19 |
29,694,229 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2366:Brd10
|
UTSW |
19 |
29,731,035 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2379:Brd10
|
UTSW |
19 |
29,696,275 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3107:Brd10
|
UTSW |
19 |
29,700,847 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4012:Brd10
|
UTSW |
19 |
29,720,990 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4222:Brd10
|
UTSW |
19 |
29,696,149 (GRCm39) |
missense |
probably benign |
0.18 |
|
R4328:Brd10
|
UTSW |
19 |
29,720,961 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4329:Brd10
|
UTSW |
19 |
29,720,961 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4387:Brd10
|
UTSW |
19 |
29,782,715 (GRCm39) |
unclassified |
probably benign |
|
|
R4688:Brd10
|
UTSW |
19 |
29,694,501 (GRCm39) |
missense |
probably benign |
0.33 |
|
R4796:Brd10
|
UTSW |
19 |
29,731,018 (GRCm39) |
missense |
probably benign |
0.33 |
|
R4820:Brd10
|
UTSW |
19 |
29,695,809 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R4832:Brd10
|
UTSW |
19 |
29,694,616 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R5056:Brd10
|
UTSW |
19 |
29,694,759 (GRCm39) |
missense |
probably benign |
|
|
R5150:Brd10
|
UTSW |
19 |
29,782,950 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R5224:Brd10
|
UTSW |
19 |
29,696,450 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5306:Brd10
|
UTSW |
19 |
29,707,230 (GRCm39) |
intron |
probably benign |
|
|
R5460:Brd10
|
UTSW |
19 |
29,732,250 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5477:Brd10
|
UTSW |
19 |
29,731,518 (GRCm39) |
missense |
probably benign |
0.33 |
|
R5531:Brd10
|
UTSW |
19 |
29,731,072 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5559:Brd10
|
UTSW |
19 |
29,694,363 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R5647:Brd10
|
UTSW |
19 |
29,731,210 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5886:Brd10
|
UTSW |
19 |
29,696,677 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6029:Brd10
|
UTSW |
19 |
29,732,367 (GRCm39) |
unclassified |
probably benign |
|
|
R6240:Brd10
|
UTSW |
19 |
29,694,640 (GRCm39) |
missense |
probably benign |
0.18 |
|
R6331:Brd10
|
UTSW |
19 |
29,695,147 (GRCm39) |
missense |
probably benign |
0.33 |
|
R6456:Brd10
|
UTSW |
19 |
29,693,914 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6584:Brd10
|
UTSW |
19 |
29,696,128 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6661:Brd10
|
UTSW |
19 |
29,700,864 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6991:Brd10
|
UTSW |
19 |
29,696,508 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R7059:Brd10
|
UTSW |
19 |
29,696,945 (GRCm39) |
missense |
probably benign |
0.33 |
|
R7211:Brd10
|
UTSW |
19 |
29,763,712 (GRCm39) |
missense |
|
|
|
R7471:Brd10
|
UTSW |
19 |
29,707,139 (GRCm39) |
splice site |
probably null |
|
|
R7686:Brd10
|
UTSW |
19 |
29,694,870 (GRCm39) |
missense |
probably benign |
0.34 |
|
R8012:Brd10
|
UTSW |
19 |
29,695,534 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R8203:Brd10
|
UTSW |
19 |
29,693,443 (GRCm39) |
missense |
probably benign |
0.18 |
|
R8353:Brd10
|
UTSW |
19 |
29,731,242 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R8672:Brd10
|
UTSW |
19 |
29,731,564 (GRCm39) |
missense |
probably benign |
|
|
R8755:Brd10
|
UTSW |
19 |
29,693,890 (GRCm39) |
missense |
probably benign |
0.03 |
|
R8918:Brd10
|
UTSW |
19 |
29,696,841 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R8954:Brd10
|
UTSW |
19 |
29,696,126 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R9038:Brd10
|
UTSW |
19 |
29,731,900 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R9195:Brd10
|
UTSW |
19 |
29,763,703 (GRCm39) |
missense |
|
|
|
R9204:Brd10
|
UTSW |
19 |
29,696,938 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R9518:Brd10
|
UTSW |
19 |
29,731,541 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R9743:Brd10
|
UTSW |
19 |
29,694,261 (GRCm39) |
missense |
probably benign |
|
|
R9747:Brd10
|
UTSW |
19 |
29,731,911 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
RF011:Brd10
|
UTSW |
19 |
29,721,009 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
X0027:Brd10
|
UTSW |
19 |
29,712,599 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- TTACTGAAGTCAACGCTGCC -3'
(R):5'- TGCTCCGTTCAGTGAACCTTG -3'
Sequencing Primer
(F):5'- CGGTGGTGCAGGTGGAAC -3'
(R):5'- AGTACACCTTTGGCACCAGG -3'
|
| Posted On |
2019-05-15 |
Incidental Mutation