Incidental Mutation 'R7141:Khsrp'
ID553370
Institutional Source Beutler Lab
Gene Symbol Khsrp
Ensembl Gene ENSMUSG00000007670
Gene NameKH-type splicing regulatory protein
Synonyms6330409F21Rik, KSRP
MMRRC Submission
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R7141 (G1)
Quality Score225.009
Status Validated
Chromosome17
Chromosomal Location57021058-57031507 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 57025602 bp
ZygosityHeterozygous
Amino Acid Change Aspartic acid to Glycine at position 226 (D226G)
Ref Sequence ENSEMBL: ENSMUSP00000007814 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000007814] [ENSMUST00000210548]
Predicted Effect possibly damaging
Transcript: ENSMUST00000007814
AA Change: D226G

PolyPhen 2 Score 0.848 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000007814
Gene: ENSMUSG00000007670
AA Change: D226G

DomainStartEndE-ValueType
low complexity region 7 69 N/A INTRINSIC
KH 144 214 1.46e-18 SMART
KH 233 305 2.46e-16 SMART
KH 322 392 7.87e-15 SMART
KH 424 497 3.29e-17 SMART
low complexity region 498 547 N/A INTRINSIC
low complexity region 557 579 N/A INTRINSIC
Pfam:DUF1897 610 636 1.8e-8 PFAM
Pfam:DUF1897 666 688 8.5e-10 PFAM
low complexity region 691 710 N/A INTRINSIC
low complexity region 717 727 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000210548
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.9%
Validation Efficiency 100% (56/56)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The KHSRP gene encodes a multifunctional RNA-binding protein implicated in a variety of cellular processes, including transcription, alternative pre-mRNA splicing, and mRNA localization (Min et al., 1997 [PubMed 9136930]; Gherzi et al., 2004 [PubMed 15175153]).[supplied by OMIM, Apr 2010]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit decreased susceptibility to HSV-1 infection. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aamp A C 1: 74,284,111 probably null Het
Abhd10 C T 16: 45,742,806 R29Q probably benign Het
Adgrv1 A G 13: 81,492,501 Y3369H probably benign Het
Agl A G 3: 116,753,286 I1305T probably benign Het
Apba3 A G 10: 81,273,055 I551V probably damaging Het
Appbp2 A T 11: 85,191,751 Y551* probably null Het
Btbd17 T C 11: 114,791,815 N357S possibly damaging Het
Casp2 T C 6: 42,280,395 F426S possibly damaging Het
Cdh5 A G 8: 104,113,001 N35D probably benign Het
Cep350 G T 1: 155,914,748 Q1354K probably damaging Het
Cep44 A G 8: 56,539,851 C243R probably damaging Het
Chst4 A T 8: 110,030,839 S131T probably damaging Het
Cox15 T C 19: 43,736,747 N406D probably benign Het
Cttnbp2 C T 6: 18,380,468 R1467H probably benign Het
Dock8 A G 19: 25,181,620 D1714G probably null Het
Erbb2 G T 11: 98,427,309 R457L probably damaging Het
Esyt3 T C 9: 99,321,440 N463S probably benign Het
Fam171a1 C T 2: 3,225,152 Q441* probably null Het
Fam186b T A 15: 99,283,892 M142L probably benign Het
Git2 G T 5: 114,769,698 C35* probably null Het
Gm21103 T G 14: 6,301,807 Q202P probably damaging Het
Gm5622 G T 14: 51,655,882 E89* probably null Het
Hmcn2 C A 2: 31,360,896 T790K probably benign Het
Hspg2 T A 4: 137,552,116 L3114H probably damaging Het
Igkv3-10 A T 6: 70,572,981 Q37L possibly damaging Het
Kcp G T 6: 29,487,512 Y1106* probably null Het
Klre1 T A 6: 129,583,166 W134R probably damaging Het
Lrrc66 A G 5: 73,629,977 I10T probably benign Het
Map4 T C 9: 109,978,870 M1T probably null Het
Met T A 6: 17,527,155 I535K probably benign Het
Mrgprb1 A G 7: 48,447,687 V159A possibly damaging Het
Mrpl41 A G 2: 24,974,456 L68P probably damaging Het
Mtmr4 T C 11: 87,600,613 W135R probably damaging Het
Mut T C 17: 40,952,839 V500A possibly damaging Het
Myh10 A G 11: 68,802,139 D1420G probably benign Het
Naglu A C 11: 101,072,230 D229A probably benign Het
Naip5 T A 13: 100,219,830 E1092D probably benign Het
Ncln G T 10: 81,487,849 Y517* probably null Het
Nr1h4 G A 10: 89,498,229 R100* probably null Het
Olfr173 G A 16: 58,797,408 T146M probably benign Het
P2rx5 A T 11: 73,160,648 T18S probably damaging Het
Pclo T C 5: 14,679,257 S2710P unknown Het
Pdhx A T 2: 103,073,314 F46I probably benign Het
Piezo2 A T 18: 63,145,110 L241* probably null Het
Pitpnm1 G A 19: 4,102,787 V65M probably damaging Het
Rgs3 A G 4: 62,690,487 D330G probably damaging Het
Scaf8 T C 17: 3,159,182 V60A unknown Het
Sema4c A G 1: 36,553,020 Y249H probably damaging Het
Spp2 T C 1: 88,407,328 Y27H probably damaging Het
Sugct T A 13: 17,644,787 I158F possibly damaging Het
Sympk A T 7: 19,054,092 I1178F probably benign Het
Tmppe T C 9: 114,404,968 Y112H probably benign Het
Trp53bp2 A G 1: 182,448,508 T187A Het
Tspoap1 A G 11: 87,774,697 S754G probably damaging Het
Vmn1r214 C T 13: 23,034,669 A111V probably benign Het
Vmn2r70 G C 7: 85,558,836 S811C probably benign Het
Zfp638 T C 6: 83,867,199 S15P unknown Het
Zfp763 A G 17: 33,018,795 S459P probably damaging Het
Other mutations in Khsrp
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00569:Khsrp APN 17 57023092 missense possibly damaging 0.49
R0973:Khsrp UTSW 17 57025576 missense probably benign
R0973:Khsrp UTSW 17 57025576 missense probably benign
R0974:Khsrp UTSW 17 57025576 missense probably benign
R0975:Khsrp UTSW 17 57027066 missense possibly damaging 0.68
R1080:Khsrp UTSW 17 57024410 frame shift probably null
R1561:Khsrp UTSW 17 57025639 missense probably benign 0.01
R1686:Khsrp UTSW 17 57025597 missense probably benign 0.32
R2133:Khsrp UTSW 17 57027832 missense probably benign 0.17
R2134:Khsrp UTSW 17 57024410 frame shift probably null
R4133:Khsrp UTSW 17 57025605 missense probably benign 0.00
R4819:Khsrp UTSW 17 57023360 missense possibly damaging 0.93
R5213:Khsrp UTSW 17 57024366 missense probably benign 0.17
R5372:Khsrp UTSW 17 57024292 missense possibly damaging 0.95
R6246:Khsrp UTSW 17 57025324 missense possibly damaging 0.45
R6528:Khsrp UTSW 17 57023543 missense probably damaging 0.99
R7071:Khsrp UTSW 17 57025386 missense possibly damaging 0.55
R8282:Khsrp UTSW 17 57024123 missense probably damaging 0.98
Z1088:Khsrp UTSW 17 57024249 missense probably damaging 0.96
Predicted Primers PCR Primer
(F):5'- AGAGGCAGTCTTGAGGATGC -3'
(R):5'- TATGTGTGTCCTTCCCACAAGAC -3'

Sequencing Primer
(F):5'- CAGTCTTGAGGATGCTGGAGAATG -3'
(R):5'- TTGTGGACAATTTGACACCCAC -3'
Posted On2019-05-15