|Institutional Source||Beutler Lab|
|Gene Name||cryptochrome 1 (photolyase-like)|
|Essential gene?||Non essential (E-score: 0.000)|
|Stock #||R0605 (G1)|
|Chromosomal Location||85131700-85185064 bp(-) (GRCm38)|
|Type of Mutation||missense|
|DNA Base Change (assembly)||T to C at 85184359 bp (GRCm38)|
|Amino Acid Change||Aspartic acid to Glycine at position 38 (D38G)|
|Ref Sequence||ENSEMBL: ENSMUSP00000020227 (fasta)|
|Gene Model||predicted gene model for transcript(s): [ENSMUST00000020227]|
Crystal Structure of Mouse Cryptochrome1 in Complex with Period2 [X-RAY DIFFRACTION]
Crystal structure of mouse Cryptochrome 1 [X-RAY DIFFRACTION]
AA Change: D38G
PolyPhen 2 Score 0.964 (Sensitivity: 0.78; Specificity: 0.95)
AA Change: D38G
|Meta Mutation Damage Score||0.8956|
|Coding Region Coverage||
|Validation Efficiency||100% (85/85)|
FUNCTION: This gene encodes a flavin adenine dinucleotide-binding protein that is a key component of the circadian core oscillator complex, which regulates the circadian clock. This gene is upregulated by Clock/Arntl heterodimers but then represses this upregulation in a feedback loop using Per/Cry heterodimers to interact with Clock/Arntl. Polymorphisms in this gene have been associated with altered sleep patterns. The encoded protein is widely conserved across plants and animals. Loss of this gene results in a shortened circadian cycle in complete darkness. [provided by RefSeq, Feb 2014]
PHENOTYPE: Homozygotes for targeted null mutations exhibit a one-hour shorter circadian period under constant darkness and reduced expression of another circadian gene in the suprachiasmatic nucleus in response to acute light exposure. [provided by MGI curators]
|Allele List at MGI|
|Other mutations in this stock||
|Other mutations in Cry1||
(F):5'- AAATCAGGGAAGGCGTTCCCATC -3'
(R):5'- TGAAGCTCTCGGTAGAGGAAGTCG -3'
(F):5'- CAGGGTCGTCAATAATCTCTACTAC -3'
(R):5'- TAGAGGAAGTCGGGGTGACC -3'