Incidental Mutation 'R7172:Slit1'
ID |
558388 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Slit1
|
Ensembl Gene |
ENSMUSG00000025020 |
Gene Name |
slit guidance ligand 1 |
Synonyms |
Slil1 |
MMRRC Submission |
045264-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R7172 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
19 |
Chromosomal Location |
41588696-41732104 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 41623105 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Proline
at position 644
(L644P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000025993
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025993]
[ENSMUST00000166496]
[ENSMUST00000169141]
|
AlphaFold |
Q80TR4 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025993
AA Change: L644P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000025993 Gene: ENSMUSG00000025020 AA Change: L644P
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
CT
|
1462 |
1531 |
3.15e-4 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000166496
AA Change: L644P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000128381 Gene: ENSMUSG00000025020 AA Change: L644P
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
low complexity region
|
1437 |
1458 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000169141
AA Change: L644P
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000129034 Gene: ENSMUSG00000025020 AA Change: L644P
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.7%
|
Validation Efficiency |
100% (74/74) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a reporter allele exhibit normal interneuron numbers and morphology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 75 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
AA467197 |
A |
T |
2: 122,480,238 (GRCm39) |
Y33F |
probably damaging |
Het |
Abca4 |
C |
T |
3: 121,897,189 (GRCm39) |
Q623* |
probably null |
Het |
Abcb1a |
A |
T |
5: 8,752,399 (GRCm39) |
I457F |
probably benign |
Het |
Abcb9 |
G |
A |
5: 124,200,869 (GRCm39) |
Q716* |
probably null |
Het |
Abhd15 |
T |
C |
11: 77,406,122 (GRCm39) |
V33A |
probably benign |
Het |
Abl2 |
A |
G |
1: 156,450,157 (GRCm39) |
D108G |
probably damaging |
Het |
Adamts3 |
G |
A |
5: 90,030,860 (GRCm39) |
|
probably benign |
Het |
Atmin |
G |
T |
8: 117,683,281 (GRCm39) |
V314L |
probably damaging |
Het |
Axl |
G |
T |
7: 25,486,399 (GRCm39) |
Q102K |
probably benign |
Het |
Cdhr5 |
A |
G |
7: 140,851,841 (GRCm39) |
S488P |
possibly damaging |
Het |
Cnn1 |
C |
A |
9: 22,016,790 (GRCm39) |
A126D |
probably damaging |
Het |
Col25a1 |
A |
T |
3: 130,363,981 (GRCm39) |
K537* |
probably null |
Het |
Cxcl2 |
A |
G |
5: 91,051,879 (GRCm39) |
T26A |
probably benign |
Het |
Dcc |
T |
C |
18: 71,511,755 (GRCm39) |
T887A |
probably benign |
Het |
Dhx36 |
T |
C |
3: 62,408,436 (GRCm39) |
D134G |
probably benign |
Het |
Dnah17 |
T |
A |
11: 117,931,957 (GRCm39) |
K3672* |
probably null |
Het |
Fadd |
G |
T |
7: 144,135,908 (GRCm39) |
H73Q |
probably benign |
Het |
Fancm |
A |
G |
12: 65,152,828 (GRCm39) |
N1095D |
possibly damaging |
Het |
Fhod3 |
T |
C |
18: 25,218,603 (GRCm39) |
S789P |
probably damaging |
Het |
Glis2 |
G |
A |
16: 4,431,339 (GRCm39) |
V289I |
probably benign |
Het |
Gm17728 |
A |
C |
17: 9,641,220 (GRCm39) |
D110A |
probably damaging |
Het |
Gm9602 |
T |
A |
14: 15,933,429 (GRCm39) |
S45T |
possibly damaging |
Het |
Gpr137 |
A |
G |
19: 6,917,049 (GRCm39) |
S161P |
possibly damaging |
Het |
Gpr89 |
C |
T |
3: 96,787,385 (GRCm39) |
|
probably null |
Het |
Gps2 |
C |
T |
11: 69,807,262 (GRCm39) |
T306I |
probably benign |
Het |
Hmcn1 |
A |
G |
1: 150,629,450 (GRCm39) |
Y936H |
possibly damaging |
Het |
Hoxa5 |
A |
G |
6: 52,181,276 (GRCm39) |
Y19H |
probably damaging |
Het |
Ifit2 |
G |
T |
19: 34,550,894 (GRCm39) |
A145S |
probably benign |
Het |
Impdh2 |
G |
T |
9: 108,437,809 (GRCm39) |
C26F |
probably benign |
Het |
Kcnh6 |
T |
C |
11: 105,911,100 (GRCm39) |
Y552H |
possibly damaging |
Het |
Kcnma1 |
A |
T |
14: 23,576,691 (GRCm39) |
M254K |
probably damaging |
Het |
Klhdc9 |
A |
T |
1: 171,188,228 (GRCm39) |
M1K |
probably null |
Het |
Klk1b11 |
A |
T |
7: 43,648,671 (GRCm39) |
D194V |
possibly damaging |
Het |
Lama1 |
A |
G |
17: 68,111,540 (GRCm39) |
I2264V |
|
Het |
Lmntd2 |
A |
G |
7: 140,793,554 (GRCm39) |
S111P |
unknown |
Het |
Megf8 |
T |
C |
7: 25,043,092 (GRCm39) |
L1338P |
probably damaging |
Het |
Mipol1 |
G |
A |
12: 57,372,321 (GRCm39) |
E127K |
possibly damaging |
Het |
Mmp25 |
A |
T |
17: 23,863,762 (GRCm39) |
C23S |
probably benign |
Het |
Mup8 |
A |
T |
4: 60,222,425 (GRCm39) |
C15* |
probably null |
Het |
Myh2 |
A |
T |
11: 67,079,527 (GRCm39) |
T995S |
probably benign |
Het |
Myo1d |
C |
T |
11: 80,483,621 (GRCm39) |
V863I |
probably benign |
Het |
N4bp1 |
A |
G |
8: 87,587,052 (GRCm39) |
|
probably null |
Het |
Nat10 |
G |
T |
2: 103,563,314 (GRCm39) |
P562T |
probably damaging |
Het |
Nedd9 |
C |
G |
13: 41,470,280 (GRCm39) |
R291P |
probably benign |
Het |
Nlrc3 |
G |
T |
16: 3,781,617 (GRCm39) |
H613Q |
probably benign |
Het |
Ntn1 |
A |
T |
11: 68,276,493 (GRCm39) |
C152S |
probably damaging |
Het |
Or2av9 |
T |
A |
11: 58,380,571 (GRCm39) |
I337F |
unknown |
Het |
Pam |
A |
T |
1: 97,762,203 (GRCm39) |
D793E |
probably benign |
Het |
Patz1 |
T |
G |
11: 3,258,032 (GRCm39) |
V631G |
probably benign |
Het |
Pcdh15 |
G |
A |
10: 74,338,597 (GRCm39) |
V1068M |
probably damaging |
Het |
Pramel17 |
A |
G |
4: 101,694,193 (GRCm39) |
V230A |
probably benign |
Het |
Prmt5 |
A |
G |
14: 54,752,343 (GRCm39) |
F151S |
possibly damaging |
Het |
Pygo2 |
G |
A |
3: 89,339,943 (GRCm39) |
V114I |
probably benign |
Het |
Rabgap1l |
A |
T |
1: 160,561,156 (GRCm39) |
S220R |
probably benign |
Het |
Rdh7 |
T |
G |
10: 127,724,218 (GRCm39) |
S89R |
possibly damaging |
Het |
Rgsl1 |
A |
C |
1: 153,701,966 (GRCm39) |
W163G |
possibly damaging |
Het |
Ryr3 |
T |
A |
2: 112,492,002 (GRCm39) |
N3783I |
probably damaging |
Het |
Shld2 |
G |
A |
14: 33,959,525 (GRCm39) |
T819I |
probably damaging |
Het |
Steap2 |
A |
G |
5: 5,732,896 (GRCm39) |
S43P |
possibly damaging |
Het |
Susd1 |
A |
T |
4: 59,315,420 (GRCm39) |
|
probably null |
Het |
Tbc1d9 |
A |
G |
8: 83,981,390 (GRCm39) |
M686V |
probably damaging |
Het |
Tdrp |
G |
A |
8: 14,024,579 (GRCm39) |
R22* |
probably null |
Het |
Tmem245 |
A |
G |
4: 56,903,946 (GRCm39) |
V598A |
possibly damaging |
Het |
Tnxb |
A |
G |
17: 34,914,994 (GRCm39) |
E1994G |
probably damaging |
Het |
Trcg1 |
T |
A |
9: 57,155,618 (GRCm39) |
V757E |
probably benign |
Het |
Trim10 |
A |
G |
17: 37,180,955 (GRCm39) |
E62G |
possibly damaging |
Het |
Ushbp1 |
G |
T |
8: 71,841,410 (GRCm39) |
A473E |
possibly damaging |
Het |
Vmn1r50 |
A |
C |
6: 90,084,386 (GRCm39) |
K44Q |
possibly damaging |
Het |
Wdr75 |
A |
G |
1: 45,838,294 (GRCm39) |
N68D |
probably damaging |
Het |
Wdr83 |
A |
G |
8: 85,806,453 (GRCm39) |
V115A |
probably damaging |
Het |
Zdhhc17 |
A |
G |
10: 110,845,809 (GRCm39) |
L28P |
possibly damaging |
Het |
Zfp738 |
C |
T |
13: 67,818,527 (GRCm39) |
C488Y |
probably damaging |
Het |
Zfp987 |
T |
G |
4: 146,058,572 (GRCm39) |
L50W |
probably damaging |
Het |
Zfyve28 |
G |
T |
5: 34,391,753 (GRCm39) |
R133S |
probably benign |
Het |
Zscan20 |
G |
T |
4: 128,479,469 (GRCm39) |
C1007* |
probably null |
Het |
|
Other mutations in Slit1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00162:Slit1
|
APN |
19 |
41,639,274 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00515:Slit1
|
APN |
19 |
41,612,940 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL00909:Slit1
|
APN |
19 |
41,590,694 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL00953:Slit1
|
APN |
19 |
41,590,739 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01116:Slit1
|
APN |
19 |
41,594,824 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01457:Slit1
|
APN |
19 |
41,599,483 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01688:Slit1
|
APN |
19 |
41,717,545 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01720:Slit1
|
APN |
19 |
41,622,653 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01925:Slit1
|
APN |
19 |
41,596,817 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02008:Slit1
|
APN |
19 |
41,634,579 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02312:Slit1
|
APN |
19 |
41,590,119 (GRCm39) |
missense |
possibly damaging |
0.66 |
IGL02398:Slit1
|
APN |
19 |
41,590,676 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02542:Slit1
|
APN |
19 |
41,615,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02559:Slit1
|
APN |
19 |
41,709,524 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02609:Slit1
|
APN |
19 |
41,590,743 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02623:Slit1
|
APN |
19 |
41,640,122 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02729:Slit1
|
APN |
19 |
41,591,773 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03230:Slit1
|
APN |
19 |
41,717,524 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Slit1
|
APN |
19 |
41,591,881 (GRCm39) |
missense |
possibly damaging |
0.57 |
PIT4576001:Slit1
|
UTSW |
19 |
41,612,988 (GRCm39) |
missense |
possibly damaging |
0.52 |
R0366:Slit1
|
UTSW |
19 |
41,599,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R0432:Slit1
|
UTSW |
19 |
41,731,732 (GRCm39) |
missense |
probably damaging |
0.98 |
R0496:Slit1
|
UTSW |
19 |
41,596,750 (GRCm39) |
splice site |
probably benign |
|
R0722:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1488:Slit1
|
UTSW |
19 |
41,596,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1615:Slit1
|
UTSW |
19 |
41,639,110 (GRCm39) |
splice site |
probably benign |
|
R1694:Slit1
|
UTSW |
19 |
41,626,031 (GRCm39) |
missense |
possibly damaging |
0.69 |
R1762:Slit1
|
UTSW |
19 |
41,591,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R1842:Slit1
|
UTSW |
19 |
41,709,477 (GRCm39) |
critical splice donor site |
probably null |
|
R1844:Slit1
|
UTSW |
19 |
41,614,012 (GRCm39) |
missense |
probably damaging |
1.00 |
R1940:Slit1
|
UTSW |
19 |
41,619,215 (GRCm39) |
missense |
probably damaging |
1.00 |
R2087:Slit1
|
UTSW |
19 |
41,625,922 (GRCm39) |
missense |
probably benign |
0.00 |
R2094:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2095:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2104:Slit1
|
UTSW |
19 |
41,590,686 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2305:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2972:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2973:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2974:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R3159:Slit1
|
UTSW |
19 |
41,592,812 (GRCm39) |
missense |
probably benign |
|
R3752:Slit1
|
UTSW |
19 |
41,635,406 (GRCm39) |
critical splice donor site |
probably null |
|
R4095:Slit1
|
UTSW |
19 |
41,596,925 (GRCm39) |
intron |
probably benign |
|
R4282:Slit1
|
UTSW |
19 |
41,602,856 (GRCm39) |
missense |
probably benign |
|
R4417:Slit1
|
UTSW |
19 |
41,602,908 (GRCm39) |
missense |
probably damaging |
1.00 |
R4607:Slit1
|
UTSW |
19 |
41,605,232 (GRCm39) |
missense |
probably benign |
0.10 |
R4729:Slit1
|
UTSW |
19 |
41,635,459 (GRCm39) |
missense |
probably damaging |
1.00 |
R4756:Slit1
|
UTSW |
19 |
41,637,452 (GRCm39) |
missense |
probably damaging |
1.00 |
R4764:Slit1
|
UTSW |
19 |
41,709,483 (GRCm39) |
nonsense |
probably null |
|
R4849:Slit1
|
UTSW |
19 |
41,637,983 (GRCm39) |
missense |
probably benign |
0.17 |
R4874:Slit1
|
UTSW |
19 |
41,717,493 (GRCm39) |
critical splice donor site |
probably null |
|
R5581:Slit1
|
UTSW |
19 |
41,605,102 (GRCm39) |
critical splice donor site |
probably null |
|
R5699:Slit1
|
UTSW |
19 |
41,613,959 (GRCm39) |
critical splice donor site |
probably null |
|
R5888:Slit1
|
UTSW |
19 |
41,731,735 (GRCm39) |
missense |
probably damaging |
1.00 |
R5906:Slit1
|
UTSW |
19 |
41,594,813 (GRCm39) |
missense |
probably damaging |
1.00 |
R6176:Slit1
|
UTSW |
19 |
41,626,034 (GRCm39) |
missense |
probably damaging |
1.00 |
R6277:Slit1
|
UTSW |
19 |
41,588,948 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6702:Slit1
|
UTSW |
19 |
41,603,309 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6860:Slit1
|
UTSW |
19 |
41,605,154 (GRCm39) |
missense |
probably benign |
0.10 |
R7015:Slit1
|
UTSW |
19 |
41,618,325 (GRCm39) |
nonsense |
probably null |
|
R7512:Slit1
|
UTSW |
19 |
41,589,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7568:Slit1
|
UTSW |
19 |
41,590,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7614:Slit1
|
UTSW |
19 |
41,622,639 (GRCm39) |
missense |
probably damaging |
1.00 |
R7650:Slit1
|
UTSW |
19 |
41,618,363 (GRCm39) |
missense |
probably damaging |
1.00 |
R7687:Slit1
|
UTSW |
19 |
41,639,128 (GRCm39) |
missense |
probably benign |
0.03 |
R7732:Slit1
|
UTSW |
19 |
41,592,847 (GRCm39) |
missense |
probably benign |
0.01 |
R7947:Slit1
|
UTSW |
19 |
41,599,248 (GRCm39) |
missense |
probably benign |
|
R7947:Slit1
|
UTSW |
19 |
41,599,247 (GRCm39) |
missense |
probably damaging |
1.00 |
R8171:Slit1
|
UTSW |
19 |
41,715,512 (GRCm39) |
missense |
probably damaging |
0.97 |
R8217:Slit1
|
UTSW |
19 |
41,612,959 (GRCm39) |
missense |
possibly damaging |
0.60 |
R8355:Slit1
|
UTSW |
19 |
41,634,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R9025:Slit1
|
UTSW |
19 |
41,612,968 (GRCm39) |
missense |
probably benign |
0.01 |
R9124:Slit1
|
UTSW |
19 |
41,594,951 (GRCm39) |
missense |
probably benign |
0.02 |
R9288:Slit1
|
UTSW |
19 |
41,613,144 (GRCm39) |
intron |
probably benign |
|
R9343:Slit1
|
UTSW |
19 |
41,615,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R9435:Slit1
|
UTSW |
19 |
41,591,764 (GRCm39) |
critical splice donor site |
probably null |
|
R9563:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R9564:Slit1
|
UTSW |
19 |
41,591,861 (GRCm39) |
missense |
probably benign |
0.16 |
R9595:Slit1
|
UTSW |
19 |
41,637,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R9667:Slit1
|
UTSW |
19 |
41,731,832 (GRCm39) |
nonsense |
probably null |
|
X0023:Slit1
|
UTSW |
19 |
41,590,079 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- CCAGAAGGACCCATGATTCC -3'
(R):5'- TCGGTCTGAGAAAATGGCCC -3'
Sequencing Primer
(F):5'- GGACCCATGATTCCCCTGAAGATG -3'
(R):5'- CCGAGGCTGGGGACACC -3'
|
Posted On |
2019-06-26 |