Incidental Mutation 'R0590:Vmn1r23'
ID 55925
Institutional Source Beutler Lab
Gene Symbol Vmn1r23
Ensembl Gene ENSMUSG00000093376
Gene Name vomeronasal 1 receptor 23
Synonyms V1rc24
MMRRC Submission 038780-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.157) question?
Stock # R0590 (G1)
Quality Score 211
Status Validated
Chromosome 6
Chromosomal Location 57925842-57926838 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 57926364 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 143 (V143A)
Ref Sequence ENSEMBL: ENSMUSP00000135676 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000175817]
AlphaFold Q8R2D0
Predicted Effect probably benign
Transcript: ENSMUST00000175817
AA Change: V143A

PolyPhen 2 Score 0.429 (Sensitivity: 0.89; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000135676
Gene: ENSMUSG00000093376
AA Change: V143A

DomainStartEndE-ValueType
Pfam:V1R 28 293 3.1e-57 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 99.0%
  • 10x: 97.7%
  • 20x: 95.7%
Validation Efficiency 100% (47/47)
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acnat2 C T 4: 49,383,273 (GRCm38) M93I probably benign Het
Adamts16 T C 13: 70,800,954 (GRCm38) D196G probably benign Het
Adhfe1 T A 1: 9,548,153 (GRCm38) probably null Het
AI661453 A G 17: 47,467,074 (GRCm38) probably benign Het
Apc G T 18: 34,316,230 (GRCm38) E2026* probably null Het
Atg2a GCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC GCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC 19: 6,245,007 (GRCm38) probably benign Het
BC017158 A G 7: 128,297,470 (GRCm38) L134P probably damaging Het
Cad T C 5: 31,062,231 (GRCm38) S688P probably damaging Het
Ccdc191 C T 16: 43,931,341 (GRCm38) R345* probably null Het
Dcaf13 T A 15: 39,145,085 (GRCm38) probably benign Het
Drc1 A G 5: 30,363,136 (GRCm38) D607G probably benign Het
Fam160a1 T C 3: 85,672,376 (GRCm38) R841G probably benign Het
Gli1 G T 10: 127,331,563 (GRCm38) A607E possibly damaging Het
Gls G A 1: 52,212,375 (GRCm38) probably benign Het
Gria1 A T 11: 57,289,409 (GRCm38) Q728H probably damaging Het
Hcrtr1 A G 4: 130,135,694 (GRCm38) L198P probably damaging Het
Ifngr1 T A 10: 19,603,942 (GRCm38) probably benign Het
Ipo5 T C 14: 120,944,357 (GRCm38) V954A possibly damaging Het
Kcnh5 G T 12: 74,965,261 (GRCm38) A628D probably damaging Het
Kif14 T C 1: 136,482,472 (GRCm38) S646P probably damaging Het
Ksr1 A G 11: 79,045,140 (GRCm38) S133P probably damaging Het
Neb T C 2: 52,137,290 (GRCm38) M7143V probably damaging Het
Nelfa G A 5: 33,901,825 (GRCm38) P229S probably damaging Het
Nfatc2 T C 2: 168,571,199 (GRCm38) T169A probably damaging Het
Nr1h4 A G 10: 89,456,567 (GRCm38) Y398H probably damaging Het
Nrcam A G 12: 44,564,032 (GRCm38) E511G probably damaging Het
Ocstamp T A 2: 165,397,751 (GRCm38) R172W probably damaging Het
Olfr1130 A G 2: 87,607,994 (GRCm38) E202G probably damaging Het
Olfr26 T A 9: 38,855,470 (GRCm38) M136K probably damaging Het
Olfr27 T C 9: 39,144,721 (GRCm38) V207A probably benign Het
Phf14 G A 6: 11,961,578 (GRCm38) V405I possibly damaging Het
Plk5 G A 10: 80,360,223 (GRCm38) R238H probably damaging Het
Pole A G 5: 110,317,926 (GRCm38) E1240G probably benign Het
Prdm15 A G 16: 97,797,761 (GRCm38) I899T possibly damaging Het
Psip1 T C 4: 83,458,144 (GRCm38) N486S probably benign Het
Rlf A G 4: 121,170,833 (GRCm38) probably benign Het
Rttn T C 18: 88,979,635 (GRCm38) S255P probably damaging Het
Sema6c A G 3: 95,172,623 (GRCm38) K711E probably damaging Het
Slc4a10 A T 2: 62,190,893 (GRCm38) probably benign Het
Trim36 T G 18: 46,172,576 (GRCm38) S435R probably benign Het
Ucp1 A G 8: 83,291,603 (GRCm38) probably benign Het
Vmn1r17 T C 6: 57,361,014 (GRCm38) Y122C probably benign Het
Wdfy4 T A 14: 33,041,174 (GRCm38) Q2166L probably benign Het
Zc3h7b C T 15: 81,776,998 (GRCm38) T346M possibly damaging Het
Zfhx4 T A 3: 5,402,633 (GRCm38) V2617D probably damaging Het
Other mutations in Vmn1r23
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01563:Vmn1r23 APN 6 57,926,076 (GRCm38) missense possibly damaging 0.89
IGL01980:Vmn1r23 APN 6 57,926,490 (GRCm38) missense probably damaging 1.00
IGL02934:Vmn1r23 APN 6 57,925,929 (GRCm38) missense probably benign 0.26
IGL03153:Vmn1r23 APN 6 57,925,932 (GRCm38) missense probably damaging 0.98
R0410:Vmn1r23 UTSW 6 57,926,190 (GRCm38) missense probably benign 0.11
R0452:Vmn1r23 UTSW 6 57,926,484 (GRCm38) missense possibly damaging 0.90
R0647:Vmn1r23 UTSW 6 57,926,184 (GRCm38) missense probably benign
R0692:Vmn1r23 UTSW 6 57,926,125 (GRCm38) nonsense probably null
R1674:Vmn1r23 UTSW 6 57,926,061 (GRCm38) missense possibly damaging 0.75
R1744:Vmn1r23 UTSW 6 57,925,925 (GRCm38) missense possibly damaging 0.81
R1774:Vmn1r23 UTSW 6 57,926,690 (GRCm38) missense probably damaging 0.97
R2101:Vmn1r23 UTSW 6 57,926,452 (GRCm38) missense possibly damaging 0.90
R2202:Vmn1r23 UTSW 6 57,926,619 (GRCm38) missense probably benign 0.01
R2204:Vmn1r23 UTSW 6 57,926,619 (GRCm38) missense probably benign 0.01
R2205:Vmn1r23 UTSW 6 57,926,619 (GRCm38) missense probably benign 0.01
R4282:Vmn1r23 UTSW 6 57,926,467 (GRCm38) missense probably benign 0.27
R4408:Vmn1r23 UTSW 6 57,926,368 (GRCm38) missense probably benign 0.01
R4532:Vmn1r23 UTSW 6 57,925,929 (GRCm38) missense probably benign 0.21
R4690:Vmn1r23 UTSW 6 57,926,025 (GRCm38) missense probably benign
R4700:Vmn1r23 UTSW 6 57,926,205 (GRCm38) missense probably benign 0.17
R4894:Vmn1r23 UTSW 6 57,926,325 (GRCm38) missense probably benign 0.00
R6164:Vmn1r23 UTSW 6 57,926,055 (GRCm38) missense possibly damaging 0.90
R6930:Vmn1r23 UTSW 6 57,926,145 (GRCm38) missense probably benign
R7129:Vmn1r23 UTSW 6 57,926,076 (GRCm38) missense possibly damaging 0.89
R7731:Vmn1r23 UTSW 6 57,926,334 (GRCm38) missense probably benign 0.03
R7877:Vmn1r23 UTSW 6 57,926,556 (GRCm38) missense probably benign
R8751:Vmn1r23 UTSW 6 57,926,467 (GRCm38) missense probably benign 0.27
R8809:Vmn1r23 UTSW 6 57,926,367 (GRCm38) missense probably damaging 0.97
Predicted Primers PCR Primer
(F):5'- TGAGGTCTACCCAGTACATGACCAC -3'
(R):5'- TGAGAGGACTCTCTATGGGCATCAC -3'

Sequencing Primer
(F):5'- GCCTGATGCTATGAAGATGC -3'
(R):5'- ATGGGCATCACATGCCTC -3'
Posted On 2013-07-11