Mutagenetix > Incidental Mutation

Incidental Mutation 'R7226:Tmem270'

562152

Institutional Source

Beutler Lab

Gene Symbol

Tmem270

Ensembl Gene

ENSMUSG00000040576

Gene Name

transmembrane protein 270

Synonyms

1700111I05Rik, Wbscr28

MMRRC Submission

045298-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.051) question?

Stock #

R7226 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

134901593-134906733 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 134901684 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Leucine at position 241 (Q241L)

Ref Sequence

ENSEMBL: ENSMUSP00000144496 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000047305] [ENSMUST00000201316]

AlphaFold

Q6UJB9

Predicted Effect

probably benign
Transcript: ENSMUST00000047305

SMART Domains

Protein: ENSMUSP00000045190
Gene: ENSMUSG00000040576

Domain	Start	End	E-Value	Type
Pfam:WBS28	1	181	3.8e-76	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000201316
AA Change: Q241L

PolyPhen 2 Score 0.429 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000144496
Gene: ENSMUSG00000040576
AA Change: Q241L

Domain	Start	End	E-Value	Type
Pfam:WBS28	1	264	1.8e-123	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700025B11Rik	C	T	15: 77,558,989	V17I	unknown	Het
Acad8	T	A	9: 26,978,430	K323*	probably null	Het
Adam18	A	T	8: 24,647,808	C339S	probably damaging	Het
Anxa7	A	G	14: 20,460,195	F396L	probably damaging	Het
Ap2m1	T	A	16: 20,539,451	V73D	probably damaging	Het
Asic2	A	T	11: 80,971,514	I270N	probably damaging	Het
Atrn	T	G	2: 130,986,744	C1070G	probably damaging	Het
Bag6	A	G	17: 35,142,945	N517S	unknown	Het
Cavin1	A	C	11: 100,970,458	D3E	probably benign	Het
Cc2d2b	T	C	19: 40,791,307	L571P	unknown	Het
Ccbe1	A	T	18: 66,083,128	C175S	probably damaging	Het
Cd19	A	G	7: 126,414,823	L5P	unknown	Het
Cd46	A	G	1: 195,042,006	S362P	possibly damaging	Het
Celf5	A	G	10: 81,468,029	S198P	probably damaging	Het
Cep170b	A	G	12: 112,737,925	R706G	possibly damaging	Het
Chd3	G	T	11: 69,369,211	R61S	unknown	Het
Cpsf6	A	C	10: 117,361,822	W253G	unknown	Het
Cyp27a1	G	A	1: 74,737,348	G481D	probably damaging	Het
Ddr1	C	T	17: 35,691,147	D218N	possibly damaging	Het
Dhx34	A	T	7: 16,198,876	V1046D	probably damaging	Het
Dhx9	A	T	1: 153,465,677	D608E	probably benign	Het
Dnajc6	C	A	4: 101,639,372	A912E	probably damaging	Het
Ehmt1	T	C	2: 24,804,782	D1051G	probably damaging	Het
Fam217b	C	A	2: 178,421,203	A320E	probably benign	Het
Farsa	T	A	8: 84,864,060	I169N	probably benign	Het
Fbn2	A	G	18: 58,037,070	C2210R	probably damaging	Het
Fbxo3	T	A	2: 104,050,297	S251T	probably benign	Het
Fer1l6	C	T	15: 58,590,535	T813I	probably benign	Het
Ftl1-ps1	A	T	13: 74,406,995	E131V	probably damaging	Het
Gins3	T	A	8: 95,637,871	I83N	probably damaging	Het
Gja3	T	C	14: 57,035,893	T341A	probably benign	Het
Gja5	A	G	3: 97,050,858	Y77C	probably damaging	Het
Gm14085	C	A	2: 122,522,532	R453S	probably benign	Het
Gm5096	A	G	18: 87,757,466	D371G	possibly damaging	Het
Gm7247	A	G	14: 51,365,351	K48R	probably damaging	Het
Gsx2	C	A	5: 75,075,960	S67*	probably null	Het
H2-Q5	T	A	17: 35,397,113	L217Q		Het
Impg2	T	A	16: 56,267,104	C1095*	probably null	Het
Itga7	G	T	10: 128,940,932	W222L	probably damaging	Het
Kdm2b	T	A	5: 122,921,449	D530V	possibly damaging	Het
Klhdc8a	A	T	1: 132,302,606	D153V	probably damaging	Het
Lin28a	C	T	4: 134,006,308	G143S	probably damaging	Het
Memo1	A	G	17: 74,202,343	L227S	probably damaging	Het
Mettl27	T	A	5: 134,935,803	V138E	probably damaging	Het
Mov10	G	T	3: 104,801,012	L474I	probably damaging	Het
Nat10	T	C	2: 103,726,753	N852S	probably benign	Het
Nfkbie	T	C	17: 45,559,227	V166A	possibly damaging	Het
Nktr	T	C	9: 121,746,533	M369T	probably damaging	Het
Nlrp9a	A	T	7: 26,558,724	N589I	probably benign	Het
Nrn1	G	A	13: 36,730,603	R8C	probably benign	Het
Nrsn1	A	G	13: 25,253,468	I159T	probably damaging	Het
Olfr132	C	T	17: 38,130,433	G253D	probably benign	Het
Olfr389	A	G	11: 73,776,677	S217P	possibly damaging	Het
Olfr485	A	T	7: 108,158,957	D305E	probably benign	Het
Olfr794	G	A	10: 129,570,715	G20D	probably benign	Het
Osbp	T	A	19: 11,978,667	D385E	probably benign	Het
Pan3	T	A	5: 147,526,992	N547K	probably damaging	Het
Pum1	C	A	4: 130,771,981	T1036K	probably damaging	Het
Rad54l2	C	A	9: 106,713,472	R485L	probably damaging	Het
Rps26	A	T	10: 128,625,218	F101I	unknown	Het
Sdsl	T	C	5: 120,460,637	N138S	probably benign	Het
Slc39a6	A	T	18: 24,584,027	H649Q	probably damaging	Het
Snip1	T	A	4: 125,071,480	F226Y	probably benign	Het
Srrd	T	C	5: 112,337,456	T334A	unknown	Het
St14	C	T	9: 31,100,152	D448N	possibly damaging	Het
Tmem55a	T	A	4: 14,892,464	D109E	probably damaging	Het
Tubb4b	T	C	2: 25,224,168	D41G	probably benign	Het
Uhrf1bp1l	A	T	10: 89,808,641	Q1181L	probably benign	Het
Usf3	T	C	16: 44,220,005	M1616T	possibly damaging	Het
Vmn2r95	A	T	17: 18,451,983	I733F	possibly damaging	Het
Zfp976	A	T	7: 42,613,260	C385*	probably null	Het

Other mutations in Tmem270

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01402:Tmem270	APN	5	134901909	splice site	probably benign
IGL01467:Tmem270	APN	5	134901961	intron	probably benign
R0126:Tmem270	UTSW	5	134902788	missense	probably benign	0.27
R2225:Tmem270	UTSW	5	134906638	missense	probably damaging	0.99
R4603:Tmem270	UTSW	5	134901628	nonsense	probably null
R5523:Tmem270	UTSW	5	134902782	missense	probably benign	0.16
R5859:Tmem270	UTSW	5	134902884	missense	probably benign	0.03
R7883:Tmem270	UTSW	5	134902827	missense	possibly damaging	0.92
R8379:Tmem270	UTSW	5	134901703	missense	probably benign	0.00
R8719:Tmem270	UTSW	5	134901796	missense	probably damaging	1.00
R9253:Tmem270	UTSW	5	134901790	missense	probably damaging	0.98
Z1088:Tmem270	UTSW	5	134906656	missense	probably damaging	0.99
Z1177:Tmem270	UTSW	5	134903003	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- GCACAGGTACACAGATGCAC -3'
(R):5'- ACCCTCCTGCAGAATTCTGTG -3'

Sequencing Primer
(F):5'- CAGGTACACAGATGCACATGTG -3'
(R):5'- CAGAATTCTGTGTTGCTGGAAGCC -3'

Posted On

2019-06-26