Incidental Mutation 'R7293:Crocc'
ID |
566541 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Crocc
|
Ensembl Gene |
ENSMUSG00000040860 |
Gene Name |
ciliary rootlet coiled-coil, rootletin |
Synonyms |
|
MMRRC Submission |
045398-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.174)
|
Stock # |
R7293 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 140770867 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Alanine to Threonine
at position 351
(A351T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000099549
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000144196]
[ENSMUST00000168157]
|
AlphaFold |
Q8CJ40 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000040222
AA Change: A187T
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000037679 Gene: ENSMUSG00000040860 AA Change: A187T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000097816
AA Change: A187T
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000095425 Gene: ENSMUSG00000040860 AA Change: A187T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102491
AA Change: A351T
PolyPhen 2
Score 0.175 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000099549 Gene: ENSMUSG00000040860 AA Change: A351T
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000144196
|
SMART Domains |
Protein: ENSMUSP00000120555 Gene: ENSMUSG00000040860
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
42 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000168157
AA Change: A187T
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000126543 Gene: ENSMUSG00000040860 AA Change: A187T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
Validation Efficiency |
97% (74/76) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
Other mutations in this stock |
Total: 75 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc2 |
G |
A |
19: 43,795,492 (GRCm39) |
G416E |
probably damaging |
Het |
Acsl5 |
G |
T |
19: 55,279,642 (GRCm39) |
W460L |
probably damaging |
Het |
Adam2 |
A |
G |
14: 66,272,634 (GRCm39) |
F614S |
probably benign |
Het |
Adamts5 |
G |
A |
16: 85,696,833 (GRCm39) |
T108I |
probably benign |
Het |
Agmat |
C |
T |
4: 141,483,246 (GRCm39) |
Q227* |
probably null |
Het |
Alg11 |
A |
G |
8: 22,555,395 (GRCm39) |
N219D |
probably damaging |
Het |
Amhr2 |
A |
G |
15: 102,355,828 (GRCm39) |
T258A |
probably benign |
Het |
Ankrd53 |
A |
G |
6: 83,740,178 (GRCm39) |
E82G |
probably null |
Het |
Blzf1 |
T |
A |
1: 164,123,452 (GRCm39) |
T292S |
possibly damaging |
Het |
Capza1 |
T |
C |
3: 104,748,151 (GRCm39) |
D71G |
probably benign |
Het |
Cc2d1b |
T |
C |
4: 108,488,873 (GRCm39) |
F770L |
probably benign |
Het |
Cckbr |
A |
T |
7: 105,083,852 (GRCm39) |
Q260L |
probably benign |
Het |
Cep162 |
T |
C |
9: 87,085,836 (GRCm39) |
T1163A |
probably benign |
Het |
Chd9 |
T |
C |
8: 91,760,707 (GRCm39) |
S2151P |
unknown |
Het |
Clk1 |
T |
A |
1: 58,453,772 (GRCm39) |
T301S |
probably benign |
Het |
Cmya5 |
T |
A |
13: 93,229,305 (GRCm39) |
S1928C |
possibly damaging |
Het |
Col24a1 |
C |
T |
3: 145,192,059 (GRCm39) |
Q1273* |
probably null |
Het |
Col4a4 |
T |
C |
1: 82,501,664 (GRCm39) |
D363G |
unknown |
Het |
Copb1 |
A |
T |
7: 113,818,837 (GRCm39) |
M827K |
probably damaging |
Het |
Crybg1 |
T |
C |
10: 43,879,428 (GRCm39) |
T587A |
probably damaging |
Het |
Csrnp3 |
A |
G |
2: 65,779,344 (GRCm39) |
R19G |
probably damaging |
Het |
Cyb5rl |
T |
C |
4: 106,938,143 (GRCm39) |
I165T |
probably damaging |
Het |
Dnah1 |
A |
T |
14: 31,009,820 (GRCm39) |
I1916N |
probably damaging |
Het |
Dvl1 |
T |
C |
4: 155,940,625 (GRCm39) |
M415T |
possibly damaging |
Het |
Dync2h1 |
A |
G |
9: 7,001,454 (GRCm39) |
S3845P |
possibly damaging |
Het |
Eif3b |
A |
G |
5: 140,405,183 (GRCm39) |
Q23R |
probably benign |
Het |
Esam |
G |
T |
9: 37,449,020 (GRCm39) |
R376L |
probably damaging |
Het |
Fat3 |
G |
C |
9: 15,826,336 (GRCm39) |
H391D |
|
Het |
Fat3 |
A |
C |
9: 15,826,592 (GRCm39) |
S305R |
|
Het |
Fgd3 |
T |
C |
13: 49,418,134 (GRCm39) |
D644G |
probably benign |
Het |
Fgf7 |
T |
C |
2: 125,877,672 (GRCm39) |
L13P |
probably damaging |
Het |
Gas2l1 |
A |
G |
11: 5,014,338 (GRCm39) |
Y41H |
probably damaging |
Het |
Glg1 |
A |
T |
8: 111,895,375 (GRCm39) |
I812N |
probably damaging |
Het |
Glp1r |
C |
T |
17: 31,143,599 (GRCm39) |
H212Y |
probably benign |
Het |
Gm5622 |
G |
T |
14: 51,893,339 (GRCm39) |
E89* |
probably null |
Het |
Gpr158 |
G |
A |
2: 21,581,750 (GRCm39) |
V410I |
possibly damaging |
Het |
Ighv1-53 |
A |
T |
12: 115,122,441 (GRCm39) |
C5* |
probably null |
Het |
Itgb2l |
A |
C |
16: 96,227,996 (GRCm39) |
Y502* |
probably null |
Het |
Jakmip1 |
G |
A |
5: 37,284,817 (GRCm39) |
V635I |
probably benign |
Het |
Kplce |
A |
T |
3: 92,776,126 (GRCm39) |
C186S |
probably benign |
Het |
Krt23 |
C |
T |
11: 99,374,682 (GRCm39) |
M270I |
probably benign |
Het |
Larp1b |
C |
T |
3: 40,939,879 (GRCm39) |
A344V |
|
Het |
Lin28b |
T |
C |
10: 45,295,282 (GRCm39) |
M134V |
probably benign |
Het |
Lrrc19 |
T |
A |
4: 94,526,627 (GRCm39) |
Y310F |
probably benign |
Het |
Lyst |
T |
A |
13: 13,854,822 (GRCm39) |
D2397E |
probably benign |
Het |
Map6 |
A |
G |
7: 98,985,740 (GRCm39) |
N751S |
possibly damaging |
Het |
Mgrn1 |
G |
A |
16: 4,750,084 (GRCm39) |
D494N |
probably benign |
Het |
Myh6 |
A |
G |
14: 55,184,631 (GRCm39) |
F1567L |
probably benign |
Het |
Myo9b |
T |
C |
8: 71,778,549 (GRCm39) |
V461A |
probably benign |
Het |
Ncan |
A |
T |
8: 70,567,861 (GRCm39) |
S84T |
probably damaging |
Het |
Nlrp9a |
G |
A |
7: 26,270,694 (GRCm39) |
C908Y |
probably damaging |
Het |
Or4c3 |
A |
T |
2: 89,851,871 (GRCm39) |
Y180N |
probably damaging |
Het |
Or4f4b |
A |
G |
2: 111,313,699 (GRCm39) |
|
probably null |
Het |
Or52n20 |
T |
A |
7: 104,319,925 (GRCm39) |
N5K |
probably damaging |
Het |
Or8g31-ps1 |
A |
T |
9: 39,276,130 (GRCm39) |
M92L |
probably benign |
Het |
Parp4 |
CTTCCTCCCCCTCCCCTTCTCTCTGCTGGCACCCATATTCCTCCCCCTCCCCTTCTCTCTGCTGGCACCCATCTTCCTCCCCCTCCCCTTCTCCCTGCTGGCACCCATATTCCTCCCCCTCCCC |
CTTCCTCCCCCTCCCCTTCTCTCTGCTGGCACCCATCTTCCTCCCCCTCCCCTTCTCCCTGCTGGCACCCATATTCCTCCCCCTCCCC |
14: 56,885,303 (GRCm39) |
|
probably benign |
Het |
Pld1 |
C |
A |
3: 28,141,435 (GRCm39) |
T666K |
probably damaging |
Het |
Pnpla6 |
A |
G |
8: 3,588,068 (GRCm39) |
Y1107C |
probably damaging |
Het |
Pramel7 |
A |
C |
2: 87,322,706 (GRCm39) |
N19K |
probably benign |
Het |
Prh1 |
C |
G |
6: 132,548,721 (GRCm39) |
P76R |
unknown |
Het |
Prkd2 |
T |
C |
7: 16,579,865 (GRCm39) |
V121A |
possibly damaging |
Het |
Ptprq |
G |
A |
10: 107,471,367 (GRCm39) |
Q1345* |
probably null |
Het |
Ryr3 |
T |
A |
2: 112,732,948 (GRCm39) |
T653S |
probably benign |
Het |
Sall2 |
G |
T |
14: 52,551,868 (GRCm39) |
Y442* |
probably null |
Het |
Slc23a2 |
A |
C |
2: 131,931,026 (GRCm39) |
F158V |
probably benign |
Het |
Smg1 |
C |
A |
7: 117,765,322 (GRCm39) |
R1954L |
unknown |
Het |
Snx31 |
G |
A |
15: 36,523,596 (GRCm39) |
T362I |
probably damaging |
Het |
Taf3 |
G |
T |
2: 9,956,901 (GRCm39) |
T422K |
probably damaging |
Het |
Tcfl5 |
T |
C |
2: 180,283,958 (GRCm39) |
D142G |
probably benign |
Het |
Tmx1 |
A |
G |
12: 70,507,325 (GRCm39) |
T188A |
probably damaging |
Het |
Tnfrsf11a |
A |
G |
1: 105,735,866 (GRCm39) |
|
probably null |
Het |
Trio |
A |
T |
15: 27,871,375 (GRCm39) |
C640S |
possibly damaging |
Het |
Ulk4 |
T |
G |
9: 121,084,190 (GRCm39) |
N427T |
probably damaging |
Het |
Vmn1r202 |
T |
C |
13: 22,685,872 (GRCm39) |
M182V |
probably benign |
Het |
Vmn1r214 |
C |
T |
13: 23,218,839 (GRCm39) |
A111V |
probably benign |
Het |
|
Other mutations in Crocc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R0448:Crocc
|
UTSW |
4 |
140,769,502 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
R1709:Crocc
|
UTSW |
4 |
140,753,410 (GRCm39) |
critical splice donor site |
probably null |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2129:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R4992:Crocc
|
UTSW |
4 |
140,773,977 (GRCm39) |
missense |
probably damaging |
0.98 |
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
R7782:Crocc
|
UTSW |
4 |
140,752,597 (GRCm39) |
missense |
probably benign |
0.05 |
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
Predicted Primers |
PCR Primer
(F):5'- TCTACAGGGGACTTAGCTGTGG -3'
(R):5'- GTAGCTTCACTCACATTGGACTTTG -3'
Sequencing Primer
(F):5'- ACTTAGCTGTGGACGGGC -3'
(R):5'- CCCTGCTCTGATAGTGAGTGTC -3'
|
Posted On |
2019-06-26 |