Incidental Mutation 'R7314:Setd4'
ID567847
Institutional Source Beutler Lab
Gene Symbol Setd4
Ensembl Gene ENSMUSG00000022948
Gene NameSET domain containing 4
SynonymsORF21
MMRRC Submission
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R7314 (G1)
Quality Score225.009
Status Validated
Chromosome16
Chromosomal Location93583457-93604063 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 93587823 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Alanine at position 326 (T326A)
Ref Sequence ENSEMBL: ENSMUSP00000023669 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000023669]
Predicted Effect probably benign
Transcript: ENSMUST00000023669
AA Change: T326A

PolyPhen 2 Score 0.126 (Sensitivity: 0.93; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000023669
Gene: ENSMUSG00000022948
AA Change: T326A

DomainStartEndE-ValueType
low complexity region 3 22 N/A INTRINSIC
Pfam:SET 58 272 3.2e-11 PFAM
Pfam:Rubis-subs-bind 306 424 5.5e-26 PFAM
Meta Mutation Damage Score 0.0846 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency 100% (44/44)
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930596D02Rik A G 14: 35,811,649 V54A probably benign Het
Abcc10 C A 17: 46,315,404 A704S probably damaging Het
Adss A G 1: 177,767,751 W408R probably damaging Het
Aplp1 T C 7: 30,435,989 E548G probably damaging Het
C4b C T 17: 34,740,356 V415I probably benign Het
Celsr3 T C 9: 108,829,144 V942A probably damaging Het
Cstf1 A G 2: 172,373,034 D25G probably damaging Het
Dnah14 A T 1: 181,785,254 probably null Het
Dnah9 G A 11: 65,989,851 T2640I probably benign Het
Dnase2b T C 3: 146,582,396 I315V probably damaging Het
Endod1 T C 9: 14,356,999 S397G probably benign Het
Eps8 A G 6: 137,527,092 V171A possibly damaging Het
Ghdc T C 11: 100,769,102 E273G probably damaging Het
Gm10282 C T 8: 72,304,995 G63R probably damaging Het
Hspbap1 T A 16: 35,825,171 S409T probably benign Het
Ireb2 T C 9: 54,892,510 Y412H probably damaging Het
Jph4 TCCATTCTCGTATACCCCA TCCA 14: 55,109,739 probably benign Het
Klhl6 A G 16: 19,957,005 Y268H probably damaging Het
Krt16 T C 11: 100,247,869 D197G probably damaging Het
Lca5 T C 9: 83,395,510 K594E possibly damaging Het
Lgi3 T C 14: 70,532,112 F84S probably damaging Het
Lingo3 T C 10: 80,834,873 I408V possibly damaging Het
Map3k7 G T 4: 31,985,769 E231* probably null Het
Nrip1 A G 16: 76,291,190 S1160P probably benign Het
Oas1g A T 5: 120,878,463 L301Q probably damaging Het
Obox3 T A 7: 15,627,154 Q62L possibly damaging Het
Olfr1164 A G 2: 88,093,114 L274P probably benign Het
Olfr524 A T 7: 140,202,413 V119D probably damaging Het
Parp8 G T 13: 116,868,460 F727L probably benign Het
Pcdha1 T C 18: 36,931,500 Y406H probably damaging Het
Pcdhgb8 A G 18: 37,762,999 D374G probably damaging Het
Pdzd8 A T 19: 59,301,351 L539* probably null Het
Phkb A G 8: 85,942,392 probably null Het
Ppp1r13b T C 12: 111,846,356 E143G probably damaging Het
Rpap2 T C 5: 107,620,379 V361A probably damaging Het
Smad9 A G 3: 54,789,323 N270D probably benign Het
Sntg2 A G 12: 30,267,108 S172P probably benign Het
Tecpr1 A G 5: 144,217,332 L101P probably damaging Het
Thap8 G A 7: 30,289,895 V177I unknown Het
Tmco3 G A 8: 13,319,605 probably null Het
Tmprss11f T C 5: 86,524,053 T427A possibly damaging Het
Trhr2 A G 8: 122,358,750 V165A possibly damaging Het
Ubr3 T A 2: 69,991,600 L1402Q probably damaging Het
Vps13c T A 9: 67,943,340 probably null Het
Zfp369 T C 13: 65,292,104 S201P probably damaging Het
Other mutations in Setd4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01359:Setd4 APN 16 93591239 missense probably damaging 1.00
IGL02217:Setd4 APN 16 93593295 missense probably damaging 1.00
R0370:Setd4 UTSW 16 93591118 missense probably damaging 0.99
R0573:Setd4 UTSW 16 93589946 missense probably benign
R1103:Setd4 UTSW 16 93585194 missense probably benign 0.01
R1631:Setd4 UTSW 16 93593248 nonsense probably null
R1826:Setd4 UTSW 16 93591299 nonsense probably null
R2356:Setd4 UTSW 16 93590983 missense probably damaging 1.00
R2360:Setd4 UTSW 16 93586234 splice site probably benign
R4362:Setd4 UTSW 16 93583686 splice site probably null
R4630:Setd4 UTSW 16 93591226 missense probably benign 0.00
R4823:Setd4 UTSW 16 93589950 missense probably benign 0.00
R5004:Setd4 UTSW 16 93591245 missense probably benign 0.02
R5257:Setd4 UTSW 16 93596333 missense probably damaging 0.98
R6667:Setd4 UTSW 16 93590030 missense probably benign 0.16
R6798:Setd4 UTSW 16 93589953 missense probably damaging 1.00
R7296:Setd4 UTSW 16 93583942 splice site probably null
R7313:Setd4 UTSW 16 93591244 missense probably benign 0.09
Predicted Primers PCR Primer
(F):5'- AGGACTGTTTCAAGCTTGACTCTC -3'
(R):5'- AGCGAGCTGTCCTAAAGAGG -3'

Sequencing Primer
(F):5'- TCACCCCTTGAGTGCCTAGG -3'
(R):5'- GAACTGGCAGACACTCTGGTTATC -3'
Posted On2019-06-26