Mutagenetix > Incidental Mutation

Incidental Mutation 'R7320:Ifi203'

568109

Institutional Source

Beutler Lab

Gene Symbol

Ifi203

Ensembl Gene

ENSMUSG00000039997

Gene Name

interferon activated gene 203

Synonyms

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.086) question?

Stock #

R7320 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

173920407-173942672 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 173929167 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 350 (N350S)

Ref Sequence

ENSEMBL: ENSMUSP00000122424 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042228] [ENSMUST00000081216] [ENSMUST00000111210] [ENSMUST00000123708] [ENSMUST00000129829] [ENSMUST00000156895]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000042228

SMART Domains

Protein: ENSMUSP00000042071
Gene: ENSMUSG00000039997

Domain	Start	End	E-Value	Type
PYRIN	6	84	1.01e-21	SMART
low complexity region	133	150	N/A	INTRINSIC
low complexity region	170	188	N/A	INTRINSIC
Pfam:HIN	251	418	1.5e-77	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000081216

SMART Domains

Protein: ENSMUSP00000079976
Gene: ENSMUSG00000039997

Domain	Start	End	E-Value	Type
PYRIN	6	84	1.01e-21	SMART
low complexity region	133	150	N/A	INTRINSIC
low complexity region	174	183	N/A	INTRINSIC
Pfam:HIN	203	370	1.3e-76	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000111210

SMART Domains

Protein: ENSMUSP00000106841
Gene: ENSMUSG00000090272

Domain	Start	End	E-Value	Type
PYRIN	5	83	3.71e-20	SMART
internal_repeat_1	152	166	2.38e-7	PROSPERO
low complexity region	170	200	N/A	INTRINSIC
internal_repeat_1	208	222	2.38e-7	PROSPERO
low complexity region	225	249	N/A	INTRINSIC
low complexity region	276	292	N/A	INTRINSIC
low complexity region	294	305	N/A	INTRINSIC
Pfam:HIN	311	479	3.4e-76	PFAM
low complexity region	497	507	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000123708

SMART Domains

Protein: ENSMUSP00000121480
Gene: ENSMUSG00000039997

Domain	Start	End	E-Value	Type
PYRIN	6	84	1.01e-21	SMART
low complexity region	133	150	N/A	INTRINSIC
low complexity region	174	183	N/A	INTRINSIC
Pfam:HIN	203	370	1.3e-76	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000129829
AA Change: N350S

SMART Domains

Protein: ENSMUSP00000122424
Gene: ENSMUSG00000039997
AA Change: N350S

Domain	Start	End	E-Value	Type
PYRIN	6	84	1.01e-21	SMART
low complexity region	133	150	N/A	INTRINSIC
low complexity region	170	188	N/A	INTRINSIC
low complexity region	607	623	N/A	INTRINSIC
Pfam:HIN	665	831	7.2e-73	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000156895

SMART Domains

Protein: ENSMUSP00000114221
Gene: ENSMUSG00000039997

Domain	Start	End	E-Value	Type
PYRIN	6	84	1.01e-21	SMART
low complexity region	133	150	N/A	INTRINSIC
low complexity region	170	188	N/A	INTRINSIC
Pfam:HIN	251	418	1.5e-77	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 84 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
5330417C22Rik	T	A	3: 108,464,303	K650*	probably null	Het
Abcc3	A	G	11: 94,367,645	I458T	probably benign	Het
Adam29	A	G	8: 55,872,714	I235T	possibly damaging	Het
AF529169	A	G	9: 89,601,626	S573P	probably benign	Het
Afap1	G	A	5: 35,948,223	V174I	probably damaging	Het
Ak8	A	T	2: 28,812,992	D456V	probably damaging	Het
Alb	T	C	5: 90,464,987		probably null	Het
Alox12	C	T	11: 70,254,472	A92T	probably benign	Het
Arhgap23	T	C	11: 97,451,545	S218P	probably benign	Het
Blm	G	A	7: 80,455,354	Q1389*	probably null	Het
C1ql4	A	T	15: 99,087,724	V2E	unknown	Het
Casp12	A	G	9: 5,348,897		probably null	Het
Ccdc73	A	T	2: 104,999,176	I1065F	possibly damaging	Het
Ccdc83	C	T	7: 90,224,034	G371D	probably damaging	Het
Cfap65	A	G	1: 74,926,604	S416P	probably damaging	Het
Cftr	T	A	6: 18,319,013	C1351S	probably damaging	Het
Clcn4	A	T	7: 7,291,828	H311Q	probably benign	Het
Cldn13	T	G	5: 134,915,020	I104L	probably benign	Het
Cul9	A	G	17: 46,510,909	V1880A	possibly damaging	Het
Ddx17	A	T	15: 79,531,904	D407E	probably damaging	Het
Ddx28	G	A	8: 106,011,325	P34S	probably damaging	Het
Dnah5	A	T	15: 28,270,470	N973Y	probably null	Het
Dock10	A	G	1: 80,549,704		probably null	Het
Dock3	T	C	9: 106,895,524	D510G	probably benign	Het
Dst	T	A	1: 34,191,094	D2589E	probably benign	Het
E2f7	T	C	10: 110,764,130	Y249H	not run	Het
Eef2kmt	T	C	16: 5,250,509	Y69C	possibly damaging	Het
Erlin1	T	C	19: 44,059,065	Y139C	probably damaging	Het
Exog	G	T	9: 119,462,478	V274L	possibly damaging	Het
Fam83e	G	A	7: 45,722,472	V98M	probably benign	Het
Fras1	C	T	5: 96,709,886	T2013I	probably benign	Het
Gart	G	T	16: 91,621,681	A970E	probably benign	Het
Gga2	T	A	7: 122,002,103	H259L	probably benign	Het
Glis3	C	A	19: 28,531,598	V329F	probably damaging	Het
Gm6356	T	A	14: 6,972,923	N53I	probably damaging	Het
Golgb1	C	A	16: 36,915,951	C1894*	probably null	Het
Isy1	T	A	6: 87,833,706	R55S	unknown	Het
Itsn1	A	T	16: 91,839,699	D678V	unknown	Het
Lhcgr	T	A	17: 88,742,078	R673S	probably benign	Het
Lnx2	C	A	5: 147,020,133	R601L	possibly damaging	Het
Map4	A	G	9: 110,081,517	T1093A	probably benign	Het
Mink1	A	G	11: 70,599,073	K92E	probably benign	Het
Moxd1	A	G	10: 24,301,465	I560V	probably benign	Het
Mrc2	C	A	11: 105,329,235	D327E	possibly damaging	Het
Notch2	A	G	3: 98,131,327	E1262G	possibly damaging	Het
Olfr1025-ps1	A	T	2: 85,918,374	I150F	probably benign	Het
Olfr1052	GTACTTTTT	GT	2: 86,297,994		probably null	Het
Olfr123	T	A	17: 37,796,357	N304K	probably benign	Het
Olfr1298	A	G	2: 111,645,952	L15S	probably benign	Het
Olfr1434	G	A	19: 12,283,816	G256D	possibly damaging	Het
Olfr1477	T	A	19: 13,503,180	M279K	possibly damaging	Het
Olfr653	C	A	7: 104,580,438	S264*	probably null	Het
Olfr785	A	T	10: 129,409,785	T140S	possibly damaging	Het
Pcbp2	T	A	15: 102,473,347	V5E	probably damaging	Het
Pcp4l1	G	A	1: 171,174,465	A42V	possibly damaging	Het
Pgghg	A	T	7: 140,943,040	Y104F	probably benign	Het
Plscr2	T	C	9: 92,291,140		probably null	Het
Ppfibp1	C	T	6: 146,978,053	A25V	probably damaging	Het
Ptgfr	C	T	3: 151,835,397	G158D	probably benign	Het
Ptgs2	T	C	1: 150,102,695	F186S	probably damaging	Het
Ptpn14	A	G	1: 189,832,759	E181G	probably benign	Het
Rpgrip1	A	G	14: 52,131,216	K291E	possibly damaging	Het
Rtn4rl1	T	C	11: 75,194,296		probably null	Het
Sema3b	T	A	9: 107,600,942	M415L	probably benign	Het
Sh3bp4	A	G	1: 89,145,494	E688G	probably damaging	Het
Slco6c1	G	A	1: 97,128,162	R5C	possibly damaging	Het
Slmap	A	G	14: 26,460,072	F369L	possibly damaging	Het
Sphk2	T	C	7: 45,712,470	N181S	possibly damaging	Het
Sqor	A	G	2: 122,799,810	T235A	probably benign	Het
St13	A	G	15: 81,389,653	L80P	probably damaging	Het
St3gal6	A	G	16: 58,493,711	Y20H	probably benign	Het
Sun1	T	G	5: 139,248,484	Y899D	probably damaging	Het
Synm	C	T	7: 67,735,380	E845K	possibly damaging	Het
Tg	A	T	15: 66,694,784	D1227V	possibly damaging	Het
Thbs1	A	G	2: 118,114,957	N306D	possibly damaging	Het
Tmcc3	A	T	10: 94,578,495	N51Y	possibly damaging	Het
Usp4	A	G	9: 108,388,306	D856G	probably benign	Het
Vil1	G	A	1: 74,418,444	A79T	probably damaging	Het
Vmn1r119	T	A	7: 21,012,346	H37L	probably damaging	Het
Vmn2r110	A	T	17: 20,596,054	M69K	probably benign	Het
Wdr78	A	T	4: 103,050,187	I634N	possibly damaging	Het
Ywhaq	A	G	12: 21,394,981	L221P	probably damaging	Het
Zfp142	G	A	1: 74,570,008	Q1543*	probably null	Het
Zfp384	T	A	6: 125,024,830	M146K	possibly damaging	Het

Other mutations in Ifi203

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00565:Ifi203	APN	1	173937740	critical splice donor site	probably null
IGL02598:Ifi203	APN	1	173935002	splice site	probably benign
IGL03172:Ifi203	APN	1	173936592	missense	possibly damaging	0.94
IGL03334:Ifi203	APN	1	173937835	nonsense	probably null
FR4304:Ifi203	UTSW	1	173928328	intron	probably benign
R0593:Ifi203	UTSW	1	173928649	intron	probably benign
R0827:Ifi203	UTSW	1	173928463	intron	probably benign
R1163:Ifi203	UTSW	1	173924137	missense	probably damaging	0.98
R1769:Ifi203	UTSW	1	173928760	nonsense	probably null
R3415:Ifi203	UTSW	1	173928760	nonsense	probably null
R3737:Ifi203	UTSW	1	173929474	intron	probably benign
R3738:Ifi203	UTSW	1	173929474	intron	probably benign
R3739:Ifi203	UTSW	1	173929474	intron	probably benign
R3791:Ifi203	UTSW	1	173935080	missense	possibly damaging	0.83
R3847:Ifi203	UTSW	1	173933796	missense	possibly damaging	0.84
R4035:Ifi203	UTSW	1	173929474	intron	probably benign
R4156:Ifi203	UTSW	1	173936540	missense	probably damaging	0.98
R4164:Ifi203	UTSW	1	173928463	intron	probably benign
R4171:Ifi203	UTSW	1	173933775	splice site	probably benign
R4200:Ifi203	UTSW	1	173924115	missense	probably damaging	0.99
R4233:Ifi203	UTSW	1	173936533	missense	possibly damaging	0.92
R4845:Ifi203	UTSW	1	173927029	missense	probably benign	0.00
R4880:Ifi203	UTSW	1	173929150	intron	probably benign
R5071:Ifi203	UTSW	1	173935110	missense	possibly damaging	0.92
R5108:Ifi203	UTSW	1	173924014	missense	probably damaging	1.00
R5284:Ifi203	UTSW	1	173928708	intron	probably benign
R5335:Ifi203	UTSW	1	173926919	missense	possibly damaging	0.71
R6198:Ifi203	UTSW	1	173924082	missense	probably damaging	0.97
R6236:Ifi203	UTSW	1	173933913	missense	probably benign	0.33
R6397:Ifi203	UTSW	1	173927204	missense	probably benign	0.33
R6929:Ifi203	UTSW	1	173928774	intron	probably benign
R7025:Ifi203	UTSW	1	173928385	intron	probably benign
R7149:Ifi203	UTSW	1	173928928	missense	unknown
R7631:Ifi203	UTSW	1	173927122	missense	unknown
R7913:Ifi203	UTSW	1	173926957	missense	probably damaging	1.00
R8183:Ifi203	UTSW	1	173928700	missense	unknown
R8297:Ifi203	UTSW	1	173937930	missense	probably damaging	1.00
R8537:Ifi203	UTSW	1	173928906	intron	probably benign
R8919:Ifi203	UTSW	1	173928928	missense	unknown
R8936:Ifi203	UTSW	1	173929291	intron	probably benign
R9081:Ifi203	UTSW	1	173929482	missense	unknown
R9223:Ifi203	UTSW	1	173937871	missense	probably benign	0.42
R9255:Ifi203	UTSW	1	173929221	missense	unknown
R9351:Ifi203	UTSW	1	173922567	missense	probably benign	0.33
R9397:Ifi203	UTSW	1	173937981	missense	probably damaging	0.99
R9506:Ifi203	UTSW	1	173923999	missense	possibly damaging	0.93
R9586:Ifi203	UTSW	1	173927057	nonsense	probably null
R9598:Ifi203	UTSW	1	173923956	missense	probably damaging	1.00
Z1088:Ifi203	UTSW	1	173928581	intron	probably benign

Predicted Primers

PCR Primer
(F):5'- TGCTGATGGCGCTCTAGTAG -3'
(R):5'- ATTCCTTCGAGCAGACTTCAG -3'

Sequencing Primer
(F):5'- GCGCTCTAGTAGTTTGGCCATTTC -3'
(R):5'- GTCTTCTCAGAAGCCTCTAGAAG -3'

Posted On

2019-06-26