Incidental Mutation 'R7022:Rrbp1'
| ID |
568341 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Rrbp1
|
| Ensembl Gene |
ENSMUSG00000027422 |
| Gene Name |
ribosome binding protein 1 |
| Synonyms |
mRRp1.8, mRRp0, mRRp5.4, mRRp47, 1700087N07Rik, mRRp10, mRRp16.8, ES/130, p180, mRRp41, mRRp2, mRRp15b, 5730465C04Rik, mRRp15a |
| MMRRC Submission |
045123-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.143)
|
| Stock # |
R7022 (G1)
|
| Quality Score |
139.008 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
143789315-143853183 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
T to A
at 143799722 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000016072
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000016072]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably null
Transcript: ENSMUST00000016072
|
| SMART Domains |
Protein: ENSMUSP00000016072
Gene: ENSMUSG00000027422
| Domain | Start | End | E-Value | Type |
|---|
|
transmembrane domain
|
9 |
31 |
N/A |
INTRINSIC |
|
Pfam:Rib_recp_KP_reg
|
33 |
171 |
2.3e-40 |
PFAM |
|
low complexity region
|
197 |
215 |
N/A |
INTRINSIC |
|
internal_repeat_2
|
218 |
373 |
2.94e-114 |
PROSPERO |
|
internal_repeat_1
|
219 |
406 |
7.79e-148 |
PROSPERO |
|
internal_repeat_1
|
410 |
618 |
7.79e-148 |
PROSPERO |
|
internal_repeat_2
|
449 |
692 |
2.94e-114 |
PROSPERO |
|
coiled coil region
|
757 |
1126 |
N/A |
INTRINSIC |
|
coiled coil region
|
1167 |
1321 |
N/A |
INTRINSIC |
|
coiled coil region
|
1342 |
1455 |
N/A |
INTRINSIC |
|
| Meta Mutation Damage Score |
0.9755 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 98.9%
|
| Validation Efficiency |
100% (75/75) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 75 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca8a |
A |
T |
11: 109,974,326 (GRCm39) |
S203T |
probably damaging |
Het |
| Adat1 |
A |
T |
8: 112,716,494 (GRCm39) |
M76K |
probably damaging |
Het |
| Ankrd33 |
G |
C |
15: 101,014,780 (GRCm39) |
V56L |
probably benign |
Het |
| Ascc3 |
T |
A |
10: 50,592,725 (GRCm39) |
L1134I |
possibly damaging |
Het |
| C3 |
T |
G |
17: 57,524,286 (GRCm39) |
D948A |
probably damaging |
Het |
| Ccdc121rt3 |
A |
C |
5: 112,503,395 (GRCm39) |
M103R |
probably benign |
Het |
| Ccdc40 |
A |
G |
11: 119,122,612 (GRCm39) |
E138G |
possibly damaging |
Het |
| Cd80 |
A |
G |
16: 38,306,866 (GRCm39) |
|
probably null |
Het |
| Cdca7 |
T |
A |
2: 72,309,873 (GRCm39) |
|
probably null |
Het |
| Chit1 |
A |
G |
1: 134,079,030 (GRCm39) |
S447G |
probably benign |
Het |
| Cmya5 |
C |
T |
13: 93,205,786 (GRCm39) |
|
probably null |
Het |
| Cnnm2 |
A |
T |
19: 46,750,989 (GRCm39) |
I260F |
probably damaging |
Het |
| Cnnm2 |
T |
A |
19: 46,847,379 (GRCm39) |
|
probably null |
Het |
| Col1a2 |
T |
C |
6: 4,534,639 (GRCm39) |
L881P |
unknown |
Het |
| Crebbp |
A |
T |
16: 3,935,187 (GRCm39) |
S901T |
probably damaging |
Het |
| Dcun1d2 |
T |
C |
8: 13,321,637 (GRCm39) |
Y158C |
probably damaging |
Het |
| Dnhd1 |
C |
T |
7: 105,370,005 (GRCm39) |
P4477S |
probably benign |
Het |
| Donson |
A |
G |
16: 91,478,218 (GRCm39) |
Y428H |
probably damaging |
Het |
| Dsp |
G |
T |
13: 38,375,716 (GRCm39) |
W1167L |
probably benign |
Het |
| Elmo2 |
C |
T |
2: 165,136,961 (GRCm39) |
V592M |
probably damaging |
Het |
| Enpp3 |
T |
A |
10: 24,702,093 (GRCm39) |
E60D |
probably damaging |
Het |
| Erfl |
A |
T |
7: 24,631,089 (GRCm39) |
|
probably null |
Het |
| Fam83b |
TAAGA |
T |
9: 76,409,394 (GRCm39) |
|
probably null |
Het |
| Fbxo38 |
A |
G |
18: 62,669,295 (GRCm39) |
C52R |
probably damaging |
Het |
| Gm10912 |
T |
C |
2: 103,897,055 (GRCm39) |
W65R |
probably damaging |
Het |
| Gm43518 |
A |
T |
5: 124,074,490 (GRCm39) |
M44L |
probably benign |
Het |
| Gnb1 |
T |
A |
4: 155,637,913 (GRCm39) |
D212E |
probably damaging |
Het |
| Gnl1 |
A |
G |
17: 36,299,620 (GRCm39) |
N597S |
probably damaging |
Het |
| Gprin1 |
T |
G |
13: 54,886,855 (GRCm39) |
E473A |
probably benign |
Het |
| Ighv1-69 |
T |
A |
12: 115,586,834 (GRCm39) |
M100L |
probably benign |
Het |
| Igkv14-100 |
T |
C |
6: 68,496,193 (GRCm39) |
S29P |
probably damaging |
Het |
| Ints6 |
A |
G |
14: 62,951,786 (GRCm39) |
V232A |
probably damaging |
Het |
| Jup |
A |
G |
11: 100,270,379 (GRCm39) |
L376P |
probably damaging |
Het |
| Kdr |
A |
T |
5: 76,132,920 (GRCm39) |
Y119* |
probably null |
Het |
| Kif1a |
T |
G |
1: 92,993,820 (GRCm39) |
T377P |
probably benign |
Het |
| Lama5 |
C |
A |
2: 179,822,524 (GRCm39) |
V2850L |
probably damaging |
Het |
| Lrp2 |
T |
C |
2: 69,313,552 (GRCm39) |
Y2393C |
probably damaging |
Het |
| Mfsd13a |
C |
T |
19: 46,356,763 (GRCm39) |
Q255* |
probably null |
Het |
| Msh3 |
A |
C |
13: 92,372,096 (GRCm39) |
D891E |
probably damaging |
Het |
| Msl2 |
A |
G |
9: 100,957,335 (GRCm39) |
N2D |
possibly damaging |
Het |
| Myo19 |
T |
C |
11: 84,791,373 (GRCm39) |
L476P |
probably damaging |
Het |
| Nbeal2 |
G |
A |
9: 110,467,686 (GRCm39) |
R501W |
probably damaging |
Het |
| Nfasc |
C |
A |
1: 132,548,787 (GRCm39) |
K293N |
probably damaging |
Het |
| Npbwr1 |
A |
T |
1: 5,987,319 (GRCm39) |
L65Q |
probably damaging |
Het |
| Nrbp1 |
T |
A |
5: 31,401,825 (GRCm39) |
D34E |
probably damaging |
Het |
| Nup205 |
T |
A |
6: 35,220,871 (GRCm39) |
V1891D |
probably benign |
Het |
| Or51g2 |
T |
A |
7: 102,623,175 (GRCm39) |
N8I |
possibly damaging |
Het |
| Or5g29 |
T |
A |
2: 85,420,942 (GRCm39) |
D19E |
probably benign |
Het |
| Or5k1b |
T |
C |
16: 58,581,482 (GRCm39) |
N19S |
probably benign |
Het |
| Or8g22 |
G |
T |
9: 38,958,379 (GRCm39) |
C156* |
probably null |
Het |
| Oscp1 |
G |
A |
4: 125,976,783 (GRCm39) |
|
probably null |
Het |
| Pcdhgb7 |
A |
G |
18: 37,886,086 (GRCm39) |
T419A |
probably damaging |
Het |
| Pdzph1 |
T |
C |
17: 59,281,121 (GRCm39) |
D387G |
probably benign |
Het |
| Phc1 |
A |
G |
6: 122,311,990 (GRCm39) |
F56S |
probably damaging |
Het |
| Pik3c2g |
A |
G |
6: 139,599,061 (GRCm39) |
E59G |
possibly damaging |
Het |
| Prickle1 |
G |
T |
15: 93,398,752 (GRCm39) |
T692K |
possibly damaging |
Het |
| Rbm45 |
T |
A |
2: 76,206,738 (GRCm39) |
L250Q |
probably damaging |
Het |
| Ror1 |
T |
A |
4: 100,265,108 (GRCm39) |
M194K |
probably damaging |
Het |
| Rundc3b |
T |
C |
5: 8,562,348 (GRCm39) |
K340R |
probably null |
Het |
| Scn1a |
T |
A |
2: 66,148,243 (GRCm39) |
T1101S |
probably damaging |
Het |
| Sdk1 |
C |
G |
5: 142,080,412 (GRCm39) |
|
probably null |
Het |
| Skic2 |
A |
G |
17: 35,064,183 (GRCm39) |
F501S |
possibly damaging |
Het |
| Slc20a1 |
T |
A |
2: 129,041,979 (GRCm39) |
M114K |
probably damaging |
Het |
| Sorl1 |
A |
C |
9: 41,881,047 (GRCm39) |
I2158S |
probably benign |
Het |
| Strip1 |
A |
T |
3: 107,534,111 (GRCm39) |
F174L |
probably benign |
Het |
| Sucnr1 |
A |
T |
3: 59,993,699 (GRCm39) |
I76L |
probably benign |
Het |
| Syt17 |
C |
T |
7: 118,007,242 (GRCm39) |
V412I |
probably benign |
Het |
| Tie1 |
T |
A |
4: 118,346,850 (GRCm39) |
H18L |
probably benign |
Het |
| Tpp1 |
T |
G |
7: 105,398,129 (GRCm39) |
K345Q |
probably damaging |
Het |
| Trcg1 |
G |
A |
9: 57,148,852 (GRCm39) |
M141I |
possibly damaging |
Het |
| Trpc4ap |
T |
C |
2: 155,499,742 (GRCm39) |
N260S |
probably benign |
Het |
| Vps41 |
C |
A |
13: 19,026,438 (GRCm39) |
T512K |
possibly damaging |
Het |
| Vps52 |
A |
T |
17: 34,178,293 (GRCm39) |
M147L |
probably benign |
Het |
| Ywhaq |
A |
G |
12: 21,441,752 (GRCm39) |
|
probably benign |
Het |
| Zfp619 |
A |
G |
7: 39,184,387 (GRCm39) |
N139S |
probably benign |
Het |
|
| Other mutations in Rrbp1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01330:Rrbp1
|
APN |
2 |
143,810,538 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
IGL01636:Rrbp1
|
APN |
2 |
143,789,815 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01923:Rrbp1
|
APN |
2 |
143,832,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02513:Rrbp1
|
APN |
2 |
143,830,350 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
IGL02548:Rrbp1
|
APN |
2 |
143,791,679 (GRCm39) |
splice site |
probably benign |
|
|
IGL02678:Rrbp1
|
APN |
2 |
143,832,107 (GRCm39) |
missense |
probably damaging |
0.98 |
|
FR4449:Rrbp1
|
UTSW |
2 |
143,809,376 (GRCm39) |
frame shift |
probably null |
|
|
PIT4378001:Rrbp1
|
UTSW |
2 |
143,816,460 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0127:Rrbp1
|
UTSW |
2 |
143,831,864 (GRCm39) |
missense |
probably benign |
0.21 |
|
R0611:Rrbp1
|
UTSW |
2 |
143,830,436 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0881:Rrbp1
|
UTSW |
2 |
143,795,173 (GRCm39) |
missense |
probably benign |
0.09 |
|
R1439:Rrbp1
|
UTSW |
2 |
143,797,032 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1534:Rrbp1
|
UTSW |
2 |
143,830,233 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1604:Rrbp1
|
UTSW |
2 |
143,831,310 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1920:Rrbp1
|
UTSW |
2 |
143,830,211 (GRCm39) |
missense |
probably benign |
0.16 |
|
R1921:Rrbp1
|
UTSW |
2 |
143,830,211 (GRCm39) |
missense |
probably benign |
0.16 |
|
R2152:Rrbp1
|
UTSW |
2 |
143,796,118 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R2153:Rrbp1
|
UTSW |
2 |
143,796,118 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R2319:Rrbp1
|
UTSW |
2 |
143,799,479 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2850:Rrbp1
|
UTSW |
2 |
143,791,269 (GRCm39) |
missense |
probably benign |
0.09 |
|
R2864:Rrbp1
|
UTSW |
2 |
143,799,557 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3433:Rrbp1
|
UTSW |
2 |
143,794,200 (GRCm39) |
splice site |
probably benign |
|
|
R3707:Rrbp1
|
UTSW |
2 |
143,795,197 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3837:Rrbp1
|
UTSW |
2 |
143,831,478 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4073:Rrbp1
|
UTSW |
2 |
143,805,030 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4074:Rrbp1
|
UTSW |
2 |
143,805,030 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4076:Rrbp1
|
UTSW |
2 |
143,805,030 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4279:Rrbp1
|
UTSW |
2 |
143,805,028 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4583:Rrbp1
|
UTSW |
2 |
143,830,671 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4820:Rrbp1
|
UTSW |
2 |
143,806,685 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R4829:Rrbp1
|
UTSW |
2 |
143,831,607 (GRCm39) |
missense |
probably benign |
0.18 |
|
R4836:Rrbp1
|
UTSW |
2 |
143,830,337 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R5589:Rrbp1
|
UTSW |
2 |
143,831,886 (GRCm39) |
missense |
probably benign |
0.16 |
|
R5801:Rrbp1
|
UTSW |
2 |
143,831,703 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5806:Rrbp1
|
UTSW |
2 |
143,805,251 (GRCm39) |
missense |
probably benign |
0.16 |
|
R5955:Rrbp1
|
UTSW |
2 |
143,791,597 (GRCm39) |
missense |
probably benign |
0.06 |
|
R6102:Rrbp1
|
UTSW |
2 |
143,830,313 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6368:Rrbp1
|
UTSW |
2 |
143,831,475 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6916:Rrbp1
|
UTSW |
2 |
143,816,518 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7061:Rrbp1
|
UTSW |
2 |
143,831,087 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R7136:Rrbp1
|
UTSW |
2 |
143,791,600 (GRCm39) |
missense |
probably benign |
0.16 |
|
R7291:Rrbp1
|
UTSW |
2 |
143,811,382 (GRCm39) |
missense |
probably benign |
0.09 |
|
R7361:Rrbp1
|
UTSW |
2 |
143,809,364 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7816:Rrbp1
|
UTSW |
2 |
143,830,855 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7877:Rrbp1
|
UTSW |
2 |
143,789,815 (GRCm39) |
unclassified |
probably benign |
|
|
R7968:Rrbp1
|
UTSW |
2 |
143,832,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8022:Rrbp1
|
UTSW |
2 |
143,798,712 (GRCm39) |
missense |
probably benign |
0.42 |
|
R8306:Rrbp1
|
UTSW |
2 |
143,792,416 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8439:Rrbp1
|
UTSW |
2 |
143,797,053 (GRCm39) |
missense |
probably benign |
0.23 |
|
R8469:Rrbp1
|
UTSW |
2 |
143,831,661 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8485:Rrbp1
|
UTSW |
2 |
143,796,933 (GRCm39) |
missense |
probably benign |
0.09 |
|
R8526:Rrbp1
|
UTSW |
2 |
143,816,403 (GRCm39) |
missense |
probably benign |
0.33 |
|
R8534:Rrbp1
|
UTSW |
2 |
143,830,095 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8556:Rrbp1
|
UTSW |
2 |
143,831,045 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R8735:Rrbp1
|
UTSW |
2 |
143,830,920 (GRCm39) |
nonsense |
probably null |
|
|
R9258:Rrbp1
|
UTSW |
2 |
143,853,161 (GRCm39) |
start gained |
probably benign |
|
|
R9326:Rrbp1
|
UTSW |
2 |
143,806,744 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9419:Rrbp1
|
UTSW |
2 |
143,811,436 (GRCm39) |
missense |
probably benign |
0.09 |
|
R9585:Rrbp1
|
UTSW |
2 |
143,799,479 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9660:Rrbp1
|
UTSW |
2 |
143,831,178 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9694:Rrbp1
|
UTSW |
2 |
143,832,099 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Rrbp1
|
UTSW |
2 |
143,816,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Rrbp1
|
UTSW |
2 |
143,811,415 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Predicted Primers |
PCR Primer
(F):5'- TAGCCTCCTTGAGCTCACTG -3'
(R):5'- GTGGGTAATGTGACCACACTGTC -3'
Sequencing Primer
(F):5'- TTCTCCAGACACGACACCTGG -3'
(R):5'- GTAATGTGACCACACTGTCCTGAG -3'
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| Posted On |
2019-07-03 |
Incidental Mutation