Mutagenetix > Incidental Mutation

Incidental Mutation 'R7336:Sgk3'

569464

Institutional Source

Beutler Lab

Gene Symbol

Sgk3

Ensembl Gene

ENSMUSG00000025915

Gene Name

serum/glucocorticoid regulated kinase 3

Synonyms

cytokine-independent survival kinase, fy, A330005P07Rik, 2510015P22Rik, Cisk

MMRRC Submission

045426-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.297) question?

Stock #

R7336 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

9868332-9971070 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 9954701 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Threonine at position 271 (A271T)

Ref Sequence

ENSEMBL: ENSMUSP00000095437 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000097826] [ENSMUST00000166384] [ENSMUST00000168907] [ENSMUST00000171265] [ENSMUST00000188298] [ENSMUST00000188738] [ENSMUST00000188782]

AlphaFold

Q9ERE3

PDB Structure

crystal structure of CISK-PX domain [X-RAY DIFFRACTION]
crystal structure of CISK-PX domain with sulfates [X-RAY DIFFRACTION]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000097826
AA Change: A271T

PolyPhen 2 Score 0.878 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000095437
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	3.9e-19	SMART
S_TKc	162	419	1.07e-105	SMART
S_TK_X	420	489	1.96e-12	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000166384
AA Change: A271T

PolyPhen 2 Score 0.878 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000130078
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	3.9e-19	SMART
S_TKc	162	419	1.07e-105	SMART
S_TK_X	420	489	1.96e-12	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000168907
AA Change: A271T

PolyPhen 2 Score 0.878 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000126861
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	3.9e-19	SMART
S_TKc	162	419	1.07e-105	SMART
S_TK_X	420	489	1.96e-12	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000171265
AA Change: A271T

PolyPhen 2 Score 0.878 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000127462
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	3.9e-19	SMART
S_TKc	162	419	1.07e-105	SMART
S_TK_X	420	489	1.96e-12	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000188298

SMART Domains

Protein: ENSMUSP00000139942
Gene: ENSMUSG00000025915

Domain	Start	End	E-Value	Type
Pfam:PX	11	66	4.5e-7	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000188738
AA Change: A271T

PolyPhen 2 Score 0.935 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000140496
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	2.4e-21	SMART
S_TKc	162	333	2.1e-8	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000188782
AA Change: A271T

PolyPhen 2 Score 0.522 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000140318
Gene: ENSMUSG00000025915
AA Change: A271T

Domain	Start	End	E-Value	Type
PX	13	120	2.4e-21	SMART
S_TKc	162	343	4.3e-9	SMART

Meta Mutation Damage Score

0.1000

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 98.9%

Validation Efficiency

99% (80/81)

MGI Phenotype

PHENOTYPE: Mutations in this gene result in wavy vibrissae and coat/ hair abnormalities, including sparse and waved hair, due to impaired hair follicle development and/or hair cycle defects. [provided by MGI curators]

Allele List at MGI

All alleles(16) : Targeted, knock-out(2) Gene trapped(7) Spontaneous(7)

Other mutations in this stock

Total: 79 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl2fm1	G	A	3: 59,840,174 (GRCm39)		probably null	Het
Abca15	A	T	7: 119,987,456 (GRCm39)	Q1247H	possibly damaging	Het
Acsf2	G	C	11: 94,462,476 (GRCm39)	Q180E	probably benign	Het
Adamts8	A	G	9: 30,873,363 (GRCm39)	D856G	probably benign	Het
Agrn	A	T	4: 156,259,371 (GRCm39)	C828*	probably null	Het
Ankub1	T	C	3: 57,573,108 (GRCm39)	T205A	probably benign	Het
Atm	A	T	9: 53,373,803 (GRCm39)	Y2150N	possibly damaging	Het
Barhl1	A	G	2: 28,799,855 (GRCm39)	F257L	probably benign	Het
Bcat2	T	A	7: 45,224,909 (GRCm39)	C27S	probably benign	Het
Bod1l	G	A	5: 41,978,867 (GRCm39)	R816C	probably damaging	Het
Btg3	A	G	16: 78,161,695 (GRCm39)	Y172H	probably benign	Het
Cacna1d	T	C	14: 29,767,239 (GRCm39)	D1940G	probably benign	Het
Catsperg2	T	A	7: 29,406,026 (GRCm39)	N624I	possibly damaging	Het
Ccdc146	A	G	5: 21,508,110 (GRCm39)	V646A	probably benign	Het
Ccp110	C	T	7: 118,321,433 (GRCm39)	P363S	probably damaging	Het
Cct4	C	A	11: 22,951,564 (GRCm39)	T377K	possibly damaging	Het
Cemip2	C	A	19: 21,803,509 (GRCm39)	Y847*	probably null	Het
Cep350	T	A	1: 155,738,022 (GRCm39)	H2607L	probably benign	Het
Cfap46	A	G	7: 139,200,020 (GRCm39)	F1954L	unknown	Het
Chat	C	T	14: 32,145,213 (GRCm39)		probably null	Het
Clasp2	A	G	9: 113,705,421 (GRCm39)		probably null	Het
Cldn9	T	C	17: 23,901,989 (GRCm39)	D212G	probably benign	Het
Cp	G	A	3: 20,018,696 (GRCm39)		probably null	Het
Cyfip1	T	A	7: 55,576,148 (GRCm39)	I1108N	possibly damaging	Het
Dnah14	A	G	1: 181,625,299 (GRCm39)	D4060G	probably damaging	Het
Dpyd	A	G	3: 118,858,570 (GRCm39)	T595A	probably damaging	Het
Eps8	G	A	6: 137,486,211 (GRCm39)	R434C	possibly damaging	Het
Fasl	A	G	1: 161,615,557 (GRCm39)	Y100H	probably damaging	Het
Fkbp9	A	T	6: 56,826,712 (GRCm39)	N104I	probably damaging	Het
Frmd4a	A	G	2: 4,478,025 (GRCm39)	T65A	possibly damaging	Het
Gm1110	T	C	9: 26,825,653 (GRCm39)	N102S	probably damaging	Het
Gm2381	T	C	7: 42,471,804 (GRCm39)	Q25R	possibly damaging	Het
Gtpbp2	A	G	17: 46,472,239 (GRCm39)	Y58C	probably damaging	Het
H2-T3	C	A	17: 36,498,237 (GRCm39)	K269N	probably damaging	Het
Icosl	C	A	10: 77,909,707 (GRCm39)	Y217*	probably null	Het
Il17rd	G	T	14: 26,809,503 (GRCm39)	R153L	probably benign	Het
Kif17	C	A	4: 138,025,617 (GRCm39)	T973K	possibly damaging	Het
Klk1b16	A	G	7: 43,790,907 (GRCm39)	I236M	probably benign	Het
Lgmn	G	A	12: 102,389,998 (GRCm39)		probably benign	Het
Lmbr1l	T	C	15: 98,811,468 (GRCm39)	D54G	possibly damaging	Het
Lrrc49	A	T	9: 60,584,474 (GRCm39)	I196N	possibly damaging	Het
Maml1	C	T	11: 50,157,276 (GRCm39)	A300T	possibly damaging	Het
Mapkap1	A	T	2: 34,423,829 (GRCm39)	Q293L	possibly damaging	Het
Mki67	T	C	7: 135,315,568 (GRCm39)	T69A	probably benign	Het
Mlph	G	A	1: 90,849,705 (GRCm39)		probably null	Het
Myh1	A	T	11: 67,111,435 (GRCm39)	M1625L	probably benign	Het
Myh3	G	T	11: 66,981,847 (GRCm39)	R781L	probably benign	Het
Nckap5	A	T	1: 125,953,786 (GRCm39)	I922K	probably benign	Het
Nlrp5	T	A	7: 23,117,059 (GRCm39)	M261K	probably damaging	Het
Or1e1d-ps1	G	A	11: 73,819,663 (GRCm39)	M204I	probably benign	Het
Or4f47	A	T	2: 111,972,514 (GRCm39)	S75C	possibly damaging	Het
Or5af1	T	A	11: 58,722,750 (GRCm39)	Y257N	probably damaging	Het
Or8g52	A	G	9: 39,630,906 (GRCm39)	N128D	probably benign	Het
Pak1	T	A	7: 97,538,179 (GRCm39)	V262E	probably benign	Het
Pigw	A	T	11: 84,767,930 (GRCm39)	D466E	probably damaging	Het
Pira2	A	T	7: 3,847,344 (GRCm39)	L115Q	probably damaging	Het
Rbm15	A	C	3: 107,240,432 (GRCm39)		probably benign	Het
Rfx1	A	G	8: 84,800,385 (GRCm39)		probably benign	Het
Rfx7	A	G	9: 72,500,639 (GRCm39)	Y133C	probably damaging	Het
Serpinb9d	T	A	13: 33,384,702 (GRCm39)	D226E	probably benign	Het
Sh2d5	T	A	4: 137,984,150 (GRCm39)	C173S	probably benign	Het
Skint8	T	C	4: 111,796,769 (GRCm39)	V291A	probably benign	Het
Slc22a27	T	A	19: 7,904,054 (GRCm39)	N28Y	probably benign	Het
Slc25a54	G	A	3: 109,023,751 (GRCm39)	V449I	probably benign	Het
Slc39a9	T	C	12: 80,726,316 (GRCm39)	F255S	probably damaging	Het
Spata31d1c	C	T	13: 65,183,942 (GRCm39)	H495Y	probably damaging	Het
Stab2	G	A	10: 86,805,049 (GRCm39)	Q310*	probably null	Het
Supt16	C	A	14: 52,408,948 (GRCm39)	A809S	possibly damaging	Het
Tenm3	A	T	8: 48,689,212 (GRCm39)	M2125K	possibly damaging	Het
Tex2	G	A	11: 106,439,685 (GRCm39)	T565M	unknown	Het
Tll1	G	A	8: 64,478,176 (GRCm39)	A859V	probably damaging	Het
Tmem106c	C	T	15: 97,867,512 (GRCm39)	T232I	possibly damaging	Het
Trim65	T	G	11: 116,019,116 (GRCm39)	D141A	probably benign	Het
Trim80	T	C	11: 115,332,042 (GRCm39)	F78S	probably damaging	Het
Txnrd1	T	A	10: 82,709,051 (GRCm39)	I83N	probably benign	Het
Vnn3	G	A	10: 23,727,806 (GRCm39)	G72D	probably benign	Het
Wasl	G	T	6: 24,619,686 (GRCm39)	P278Q	unknown	Het
Wdr62	A	T	7: 29,943,342 (GRCm39)	L951Q	probably damaging	Het
Zfp760	C	T	17: 21,942,814 (GRCm39)	T663I	unknown	Het

Other mutations in Sgk3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00229:Sgk3	APN	1	9,938,609 (GRCm39)	missense	probably damaging	1.00
IGL00906:Sgk3	APN	1	9,947,470 (GRCm39)	missense	probably benign	0.00
IGL01683:Sgk3	APN	1	9,952,091 (GRCm39)	missense	probably damaging	1.00
IGL02803:Sgk3	APN	1	9,949,273 (GRCm39)	missense	possibly damaging	0.76
woolly	UTSW	1	9,956,329 (GRCm39)	missense	probably damaging	1.00
R0034:Sgk3	UTSW	1	9,955,902 (GRCm39)	missense	probably damaging	1.00
R0034:Sgk3	UTSW	1	9,955,902 (GRCm39)	missense	probably damaging	1.00
R0374:Sgk3	UTSW	1	9,949,306 (GRCm39)	splice site	probably null
R0526:Sgk3	UTSW	1	9,951,804 (GRCm39)	missense	probably damaging	1.00
R1483:Sgk3	UTSW	1	9,942,518 (GRCm39)	missense	possibly damaging	0.80
R1992:Sgk3	UTSW	1	9,950,567 (GRCm39)	missense	possibly damaging	0.52
R2073:Sgk3	UTSW	1	9,961,649 (GRCm39)	missense	probably benign	0.01
R4590:Sgk3	UTSW	1	9,969,020 (GRCm39)	missense	possibly damaging	0.94
R5436:Sgk3	UTSW	1	9,952,097 (GRCm39)	missense	probably damaging	1.00
R5511:Sgk3	UTSW	1	9,968,911 (GRCm39)	intron	probably benign
R5623:Sgk3	UTSW	1	9,872,520 (GRCm39)	intron	probably benign
R5936:Sgk3	UTSW	1	9,956,045 (GRCm39)	intron	probably benign
R6778:Sgk3	UTSW	1	9,956,369 (GRCm39)	critical splice donor site	probably null
R6842:Sgk3	UTSW	1	9,968,979 (GRCm39)	missense	probably benign
R7055:Sgk3	UTSW	1	9,956,284 (GRCm39)	missense	probably damaging	1.00
R7186:Sgk3	UTSW	1	9,956,227 (GRCm39)	missense	probably benign	0.00
R7429:Sgk3	UTSW	1	9,942,483 (GRCm39)	missense	probably benign	0.00
R7430:Sgk3	UTSW	1	9,942,483 (GRCm39)	missense	probably benign	0.00
R7787:Sgk3	UTSW	1	9,952,016 (GRCm39)	missense	probably damaging	1.00
R8949:Sgk3	UTSW	1	9,938,699 (GRCm39)	splice site	probably benign
R9269:Sgk3	UTSW	1	9,942,534 (GRCm39)	missense	probably benign	0.41
R9487:Sgk3	UTSW	1	9,950,616 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- ATGTTTGAAGACAGCGGCAC -3'
(R):5'- AGAATATTTTCTGGCTTCAAGTCTC -3'

Sequencing Primer
(F):5'- ACAGCGGCACAGTAGCTG -3'
(R):5'- TTTTCTGGCTTCAAGTCTCTATATTG -3'

Posted On

2019-09-13