Mutagenetix > Incidental Mutation

Incidental Mutation 'R7338:Or6b13'

569646

Institutional Source

Beutler Lab

Gene Symbol

Or6b13

Ensembl Gene

ENSMUSG00000050366

Gene Name

olfactory receptor family 6 subfamily B member 13

Synonyms

GA_x6K02T2PBJ9-42354580-42353624, MOR103-14P, Olfr524

MMRRC Submission

045428-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.065) question?

Stock #

R7338 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

139781299-139785192 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 139782446 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Glutamic Acid at position 79 (V79E)

Ref Sequence

ENSEMBL: ENSMUSP00000150970 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000051943] [ENSMUST00000215815]

AlphaFold

Q7TRU0

Predicted Effect

probably benign
Transcript: ENSMUST00000051943
AA Change: V79E

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000053565
Gene: ENSMUSG00000050366
AA Change: V79E

Domain	Start	End	E-Value	Type
Pfam:7tm_4	32	309	7.5e-56	PFAM
Pfam:7tm_1	42	292	6.4e-20	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000215815
AA Change: V79E

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

98% (54/55)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca3	T	C	17: 24,595,717 (GRCm39)	S357P	possibly damaging	Het
Arhgap28	T	C	17: 68,203,106 (GRCm39)	R166G	probably damaging	Het
Bcan	T	A	3: 87,901,550 (GRCm39)	E384V	probably damaging	Het
Bcl9l	A	G	9: 44,420,005 (GRCm39)	N1137S	probably benign	Het
Caprin1	A	G	2: 103,609,768 (GRCm39)	L170S	probably benign	Het
Card6	C	T	15: 5,129,354 (GRCm39)	E681K	probably benign	Het
Catsperb	G	A	12: 101,447,243 (GRCm39)	V248I	probably benign	Het
Ccnj	T	A	19: 40,825,477 (GRCm39)	H62Q	probably damaging	Het
Cd180	A	C	13: 102,842,936 (GRCm39)	I661L	probably benign	Het
Cdk11b	A	G	4: 155,732,008 (GRCm39)	R473G	unknown	Het
Cep126	T	C	9: 8,099,799 (GRCm39)	T912A	possibly damaging	Het
Chek2	T	A	5: 111,021,380 (GRCm39)	V530E	probably benign	Het
Chga	G	T	12: 102,529,100 (GRCm39)	S359I	probably damaging	Het
Cnrip1	T	C	11: 17,004,657 (GRCm39)	V69A	probably damaging	Het
Cyp2a5	A	T	7: 26,542,372 (GRCm39)	Q458L	probably damaging	Het
Cyp2j11	T	A	4: 96,195,524 (GRCm39)	T391S	possibly damaging	Het
Dhx16	T	C	17: 36,199,036 (GRCm39)	L794P	probably damaging	Het
Dscaml1	A	G	9: 45,585,802 (GRCm39)	T580A	probably benign	Het
Elmo1	A	T	13: 20,464,982 (GRCm39)	I184L	probably benign	Het
Gabra1	C	T	11: 42,073,121 (GRCm39)	G51S	unknown	Het
Gabrr3	C	A	16: 59,268,439 (GRCm39)	L351I	possibly damaging	Het
Gbp7	A	T	3: 142,243,786 (GRCm39)	N111I	probably damaging	Het
Gjd2	C	T	2: 113,841,583 (GRCm39)	R298H	probably damaging	Het
Gm5930	T	C	14: 44,573,914 (GRCm39)	Y141C	probably damaging	Het
Grin3a	G	T	4: 49,771,238 (GRCm39)	N511K	probably benign	Het
Hdac7	T	C	15: 97,707,903 (GRCm39)	D122G	probably benign	Het
Ifi204	G	A	1: 173,587,703 (GRCm39)	T152I	possibly damaging	Het
Lrrc9	C	T	12: 72,510,305 (GRCm39)		probably null	Het
Med21	T	A	6: 146,544,082 (GRCm39)		probably benign	Het
Mmp19	A	T	10: 128,634,952 (GRCm39)	T523S	probably benign	Het
Nav3	G	A	10: 109,605,073 (GRCm39)	T1000I	probably benign	Het
Nherf2	T	A	17: 24,869,182 (GRCm39)		probably benign	Het
Nin	T	C	12: 70,090,838 (GRCm39)	D859G		Het
Nip7	T	G	8: 107,783,916 (GRCm39)	L52R	possibly damaging	Het
Or10d1c	A	G	9: 38,893,816 (GRCm39)	Y175H	probably damaging	Het
Or5al5	A	T	2: 85,961,726 (GRCm39)	F94I	probably damaging	Het
Otop1	T	A	5: 38,457,547 (GRCm39)	Y435*	probably null	Het
Pak4	A	G	7: 28,264,381 (GRCm39)	S174P	probably benign	Het
Pcsk7	G	A	9: 45,837,287 (GRCm39)	R537Q	probably benign	Het
Podxl	G	A	6: 31,505,941 (GRCm39)	S34F	unknown	Het
Prr36	G	A	8: 4,266,212 (GRCm39)	R113C	probably damaging	Het
Ptk7	T	C	17: 46,890,525 (GRCm39)	I436V	probably benign	Het
Slc13a5	C	T	11: 72,157,310 (GRCm39)	V28I	probably benign	Het
Slco6d1	A	T	1: 98,349,097 (GRCm39)	D56V	probably benign	Het
Spg11	G	A	2: 121,885,858 (GRCm39)	R2317W	probably damaging	Het
Stom	T	A	2: 35,213,760 (GRCm39)		probably null	Het
Svs5	T	C	2: 164,174,728 (GRCm39)	L8P	possibly damaging	Het
Tmem141	C	A	2: 25,511,626 (GRCm39)	V39F	probably damaging	Het
Tmprss6	A	G	15: 78,344,019 (GRCm39)	L181P	probably damaging	Het
Tnni3	A	G	7: 4,524,379 (GRCm39)	S40P	probably benign	Het
Tubgcp4	A	G	2: 121,024,465 (GRCm39)	I548V	probably benign	Het
Twf2	A	G	9: 106,081,138 (GRCm39)		probably benign	Het
Wnt5b	C	A	6: 119,425,092 (GRCm39)		probably null	Het
Wrap73	A	G	4: 154,237,043 (GRCm39)	D210G	probably benign	Het
Yipf4	T	G	17: 74,796,771 (GRCm39)	S21A	probably benign	Het
Zscan20	A	G	4: 128,481,943 (GRCm39)	M573T	probably benign	Het

Other mutations in Or6b13

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01991:Or6b13	APN	7	139,782,345 (GRCm39)	missense	probably damaging	1.00
IGL01999:Or6b13	APN	7	139,782,345 (GRCm39)	missense	probably damaging	1.00
IGL02005:Or6b13	APN	7	139,782,345 (GRCm39)	missense	probably damaging	1.00
IGL02030:Or6b13	APN	7	139,782,545 (GRCm39)	missense	probably damaging	0.97
IGL02474:Or6b13	APN	7	139,782,500 (GRCm39)	missense	probably damaging	1.00
H8441:Or6b13	UTSW	7	139,781,871 (GRCm39)	missense	possibly damaging	0.81
R0426:Or6b13	UTSW	7	139,782,029 (GRCm39)	missense	possibly damaging	0.81
R0704:Or6b13	UTSW	7	139,782,548 (GRCm39)	missense	probably benign	0.00
R0891:Or6b13	UTSW	7	139,782,372 (GRCm39)	missense	probably damaging	1.00
R1624:Or6b13	UTSW	7	139,781,864 (GRCm39)	missense	probably damaging	0.96
R1865:Or6b13	UTSW	7	139,782,285 (GRCm39)	missense	probably damaging	1.00
R1938:Or6b13	UTSW	7	139,782,144 (GRCm39)	missense	probably benign	0.30
R2105:Or6b13	UTSW	7	139,782,656 (GRCm39)	missense	probably benign	0.02
R3009:Or6b13	UTSW	7	139,782,669 (GRCm39)	missense	probably benign
R3546:Or6b13	UTSW	7	139,782,014 (GRCm39)	missense	probably damaging	1.00
R4849:Or6b13	UTSW	7	139,782,340 (GRCm39)	nonsense	probably null
R5009:Or6b13	UTSW	7	139,781,751 (GRCm39)	missense	probably benign
R5105:Or6b13	UTSW	7	139,782,462 (GRCm39)	missense	probably damaging	1.00
R5413:Or6b13	UTSW	7	139,782,635 (GRCm39)	missense	possibly damaging	0.94
R5422:Or6b13	UTSW	7	139,782,305 (GRCm39)	missense	probably damaging	1.00
R7314:Or6b13	UTSW	7	139,782,326 (GRCm39)	missense	probably damaging	0.99
R7921:Or6b13	UTSW	7	139,782,212 (GRCm39)	missense	probably damaging	1.00
R8438:Or6b13	UTSW	7	139,782,170 (GRCm39)	missense	probably damaging	1.00
R9261:Or6b13	UTSW	7	139,782,563 (GRCm39)	missense	probably benign	0.29
V1662:Or6b13	UTSW	7	139,781,871 (GRCm39)	missense	possibly damaging	0.81

Predicted Primers

PCR Primer
(F):5'- TCATGATGACTGGGTAGCGAAG -3'
(R):5'- GGAACAGCTCAGATGTGACTG -3'

Sequencing Primer
(F):5'- AAGAAGTACAGTTGGGCC -3'
(R):5'- TCAGATGTGACTGAGTTCATCC -3'

Posted On

2019-09-13