Incidental Mutation 'R7351:Pramel6'
ID570553
Institutional Source Beutler Lab
Gene Symbol Pramel6
Ensembl Gene ENSMUSG00000025838
Gene Namepreferentially expressed antigen in melanoma like 6
Synonyms
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.063) question?
Stock #R7351 (G1)
Quality Score225.009
Status Validated
Chromosome2
Chromosomal Location87506565-87510872 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 87510328 bp
ZygosityHeterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 335 (F335I)
Ref Sequence ENSEMBL: ENSMUSP00000026956 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026956] [ENSMUST00000111572]
Predicted Effect probably benign
Transcript: ENSMUST00000026956
AA Change: F335I

PolyPhen 2 Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
SMART Domains Protein: ENSMUSP00000026956
Gene: ENSMUSG00000025838
AA Change: F335I

DomainStartEndE-ValueType
low complexity region 17 31 N/A INTRINSIC
SCOP:d1a4ya_ 223 411 5e-8 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000111572
AA Change: F335I

PolyPhen 2 Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
SMART Domains Protein: ENSMUSP00000107198
Gene: ENSMUSG00000025838
AA Change: F335I

DomainStartEndE-ValueType
low complexity region 17 31 N/A INTRINSIC
SCOP:d1a4ya_ 223 411 5e-8 SMART
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 98.9%
Validation Efficiency 98% (56/57)
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700006A11Rik C A 3: 124,412,510 G343V probably damaging Het
1700006E09Rik A G 11: 101,991,505 E163G probably benign Het
1700007K13Rik TCTCTGGGGCAGGCTTAGCCTTGGGCTCCCCCGGCTCCGGCTCCTCTGGGGCAGGCTTAGCCTTGGGCTCCCCCGGCTCCGGCTCCTCTGGGGCGGGCTTAGCCTTGGGCTCCCCCGGCTCCGGCTCCTC TCTCTGGGGCAGGCTTAGCCTTGGGCTCCCCCGGCTCCGGCTCCTCTGGGGCGGGCTTAGCCTTGGGCTCCCCCGGCTCCGGCTCCTC 2: 28,466,110 probably benign Het
Adamts6 G A 13: 104,390,112 S516N possibly damaging Het
Ahi1 A G 10: 20,965,933 D301G probably damaging Het
Arhgef37 T A 18: 61,498,215 L566F possibly damaging Het
AU040320 A G 4: 126,816,444 N328D probably damaging Het
Bicc1 G T 10: 70,947,900 T469K probably benign Het
Brk1 T C 6: 113,615,781 S42P probably benign Het
Ccdc180 A G 4: 45,903,887 E351G possibly damaging Het
Cenpo A T 12: 4,216,581 F176I probably damaging Het
Clec12b A G 6: 129,379,911 probably null Het
Ddx42 A G 11: 106,247,682 N769S probably benign Het
Drc7 A G 8: 95,058,507 D165G probably benign Het
Dync2h1 A T 9: 7,167,145 I486N probably damaging Het
Gmip A G 8: 69,817,384 D679G probably benign Het
Gml2 T C 15: 74,821,376 V76A possibly damaging Het
Gpr26 T C 7: 131,974,365 C253R probably damaging Het
H2-Q4 A G 17: 35,382,878 T239A possibly damaging Het
Hmcn1 T A 1: 150,667,889 Y2845F probably damaging Het
Ift172 A G 5: 31,275,896 Y550H probably damaging Het
Irgm2 G A 11: 58,219,605 V41M possibly damaging Het
Lrp2 C T 2: 69,448,142 G3956R probably damaging Het
Matn2 G A 15: 34,345,336 R163H probably damaging Het
Mxd1 A G 6: 86,651,466 S151P probably damaging Het
Olfr1022 G T 2: 85,864,071 probably benign Het
Olfr1246 C T 2: 89,590,513 G201S probably benign Het
Olfr1330 T C 4: 118,893,836 V251A probably benign Het
Olfr147 C T 9: 38,403,443 L190F probably damaging Het
Plcg2 A G 8: 117,590,310 E642G possibly damaging Het
Psd G T 19: 46,322,430 S393R probably benign Het
Pwwp2a A G 11: 43,682,280 D63G probably benign Het
Rbm28 T C 6: 29,158,880 T139A probably benign Het
Ripk2 T G 4: 16,155,048 E157A probably damaging Het
Rnf145 G A 11: 44,548,796 V140I possibly damaging Het
Rnf38 T C 4: 44,149,102 N114D probably benign Het
Samd9l G A 6: 3,374,157 R1035C probably benign Het
Sec14l3 A G 11: 4,074,785 T245A probably benign Het
Serpina10 A T 12: 103,628,935 F8L probably benign Het
Slc16a8 T A 15: 79,253,641 D56V probably damaging Het
Spag9 A T 11: 94,092,976 E726D probably benign Het
Spg11 A G 2: 122,069,931 F1547L possibly damaging Het
Sspo T C 6: 48,464,921 I1955T possibly damaging Het
Stx18 T A 5: 38,039,411 V27E probably benign Het
Taf1c A G 8: 119,599,000 S708P probably damaging Het
Tas2r126 T C 6: 42,435,306 F258L probably benign Het
Tdpoz2 C T 3: 93,652,593 W24* probably null Het
Tmc8 T C 11: 117,783,828 L123P probably damaging Het
Trmo A T 4: 46,387,716 Y35N possibly damaging Het
Ttn C T 2: 76,767,686 V19628I possibly damaging Het
Ttn G A 2: 76,939,930 A2685V unknown Het
Usp15 A T 10: 123,132,999 M349K probably damaging Het
Vmn2r89 A G 14: 51,456,282 N363S probably benign Het
Vwa3a T A 7: 120,776,336 I423N probably damaging Het
Zfp592 T C 7: 81,041,691 V1206A probably benign Het
Zfp866 A T 8: 69,765,897 Y358N probably damaging Het
Other mutations in Pramel6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01555:Pramel6 APN 2 87510785 utr 3 prime probably benign
IGL02867:Pramel6 APN 2 87510392 missense probably damaging 0.98
IGL03212:Pramel6 APN 2 87510425 missense probably damaging 1.00
R1453:Pramel6 UTSW 2 87508573 missense possibly damaging 0.83
R1905:Pramel6 UTSW 2 87509182 missense probably damaging 1.00
R1905:Pramel6 UTSW 2 87509183 missense probably damaging 0.99
R1940:Pramel6 UTSW 2 87508732 missense probably damaging 1.00
R2057:Pramel6 UTSW 2 87508715 missense possibly damaging 0.92
R2073:Pramel6 UTSW 2 87508744 missense probably damaging 1.00
R3423:Pramel6 UTSW 2 87510796 splice site probably null
R3500:Pramel6 UTSW 2 87509225 missense probably damaging 0.96
R4097:Pramel6 UTSW 2 87509353 missense probably benign 0.19
R4396:Pramel6 UTSW 2 87508530 missense probably damaging 1.00
R4538:Pramel6 UTSW 2 87508559 missense probably benign 0.02
R4719:Pramel6 UTSW 2 87510752 missense probably benign 0.00
R4779:Pramel6 UTSW 2 87509597 missense probably benign 0.01
R6054:Pramel6 UTSW 2 87508659 missense probably benign 0.07
R6457:Pramel6 UTSW 2 87509438 missense probably damaging 0.99
R6477:Pramel6 UTSW 2 87510602 missense possibly damaging 0.92
R6492:Pramel6 UTSW 2 87510422 missense probably benign 0.19
R6684:Pramel6 UTSW 2 87509404 missense probably damaging 1.00
R6983:Pramel6 UTSW 2 87509579 missense possibly damaging 0.94
R7357:Pramel6 UTSW 2 87510512 missense not run
R7748:Pramel6 UTSW 2 87508699 missense probably damaging 1.00
R7991:Pramel6 UTSW 2 87509687 missense probably benign 0.00
R8116:Pramel6 UTSW 2 87508464 missense probably benign 0.02
R8367:Pramel6 UTSW 2 87510470 missense probably damaging 1.00
Z1176:Pramel6 UTSW 2 87508722 missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- GACAAGTGTTACCTGCCCTG -3'
(R):5'- TGTGTGACAAAGAAGGGTCTTC -3'

Sequencing Primer
(F):5'- GACAAGTGTTACCTGCCCTGATTTC -3'
(R):5'- CACGCAGGGAGATATCATTATGAC -3'
Posted On2019-09-13