Other mutations in this stock |
Total: 142 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A2ml1 |
A |
C |
6: 128,546,247 (GRCm38) |
|
probably null |
Het |
Aars |
A |
G |
8: 111,042,342 (GRCm38) |
Y258C |
probably damaging |
Het |
Acaa2 |
A |
T |
18: 74,805,872 (GRCm38) |
Y376F |
probably benign |
Het |
Adcy1 |
C |
T |
11: 7,169,543 (GRCm38) |
S1062F |
possibly damaging |
Het |
Adgrb3 |
A |
T |
1: 25,531,919 (GRCm38) |
C492* |
probably null |
Het |
Adgrg6 |
A |
G |
10: 14,535,892 (GRCm38) |
F22S |
probably benign |
Het |
Adh1 |
A |
G |
3: 138,288,887 (GRCm38) |
|
probably null |
Het |
Afm |
T |
A |
5: 90,551,400 (GRCm38) |
C568S |
probably benign |
Het |
Ago4 |
C |
T |
4: 126,511,464 (GRCm38) |
E439K |
probably benign |
Het |
Aifm2 |
T |
G |
10: 61,727,717 (GRCm38) |
V122G |
possibly damaging |
Het |
Akap6 |
A |
G |
12: 53,142,574 (GRCm38) |
N2257S |
probably benign |
Het |
Ap3m2 |
A |
G |
8: 22,804,010 (GRCm38) |
I8T |
probably benign |
Het |
Apc2 |
C |
A |
10: 80,311,394 (GRCm38) |
L761I |
probably damaging |
Het |
Arntl |
C |
A |
7: 113,299,208 (GRCm38) |
T281K |
probably benign |
Het |
Asap2 |
A |
G |
12: 21,112,051 (GRCm38) |
D3G |
probably benign |
Het |
Asna1 |
A |
T |
8: 85,019,863 (GRCm38) |
F119I |
probably benign |
Het |
Asxl1 |
T |
C |
2: 153,401,993 (GRCm38) |
C1489R |
probably damaging |
Het |
Atm |
T |
G |
9: 53,453,437 (GRCm38) |
|
probably null |
Het |
Bpifa6 |
C |
A |
2: 153,986,433 (GRCm38) |
A153E |
probably damaging |
Het |
Cav2 |
A |
G |
6: 17,282,060 (GRCm38) |
T106A |
probably benign |
Het |
Cavin4 |
A |
G |
4: 48,663,631 (GRCm38) |
N4D |
probably benign |
Het |
Cenpc1 |
T |
C |
5: 86,046,499 (GRCm38) |
N136S |
probably benign |
Het |
Cfap45 |
T |
A |
1: 172,538,343 (GRCm38) |
|
probably null |
Het |
Col3a1 |
G |
A |
1: 45,327,647 (GRCm38) |
|
probably null |
Het |
Crocc2 |
C |
T |
1: 93,194,087 (GRCm38) |
L653F |
probably damaging |
Het |
Cry2 |
A |
G |
2: 92,413,664 (GRCm38) |
L388P |
probably damaging |
Het |
Cstb |
T |
C |
10: 78,426,988 (GRCm38) |
F43S |
probably damaging |
Het |
Ctcfl |
A |
G |
2: 173,112,258 (GRCm38) |
Y349H |
probably damaging |
Het |
Ctu2 |
T |
A |
8: 122,481,499 (GRCm38) |
V485D |
probably damaging |
Het |
Cwc25 |
A |
C |
11: 97,747,997 (GRCm38) |
L367R |
possibly damaging |
Het |
Dock4 |
T |
A |
12: 40,788,244 (GRCm38) |
H1061Q |
possibly damaging |
Het |
Dpy19l3 |
C |
A |
7: 35,752,642 (GRCm38) |
V26L |
probably benign |
Het |
Dusp27 |
G |
T |
1: 166,112,063 (GRCm38) |
S58* |
probably null |
Het |
Elmo1 |
A |
T |
13: 20,280,935 (GRCm38) |
I225F |
probably benign |
Het |
Ep300 |
T |
C |
15: 81,650,545 (GRCm38) |
S2268P |
probably damaging |
Het |
F2r |
C |
T |
13: 95,618,328 (GRCm38) |
C16Y |
probably damaging |
Het |
Fam126b |
T |
C |
1: 58,530,034 (GRCm38) |
K462R |
probably benign |
Het |
Fbxo33 |
C |
A |
12: 59,204,371 (GRCm38) |
E453* |
probably null |
Het |
Flot1 |
A |
T |
17: 35,825,513 (GRCm38) |
D186V |
probably damaging |
Het |
Fmn2 |
CCCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATATCTCCCCTACCTCCTCTCCCTGGAATGGGAATACCTCC |
CCCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATATCTCCCCTACCTCCTCTCCCTGGAATGGGAATACCTCC |
1: 174,609,203 (GRCm38) |
|
probably benign |
Het |
Fras1 |
T |
C |
5: 96,596,785 (GRCm38) |
C560R |
probably damaging |
Het |
Gfi1 |
A |
T |
5: 107,723,229 (GRCm38) |
S165T |
possibly damaging |
Het |
Gli2 |
T |
C |
1: 118,848,492 (GRCm38) |
D400G |
probably damaging |
Het |
Gm11639 |
T |
C |
11: 104,714,702 (GRCm38) |
I298T |
probably benign |
Het |
Gm37240 |
T |
A |
3: 84,972,637 (GRCm38) |
|
probably null |
Het |
Gml |
C |
T |
15: 74,817,121 (GRCm38) |
V27I |
possibly damaging |
Het |
Htt |
A |
T |
5: 34,803,799 (GRCm38) |
I257F |
probably benign |
Het |
Ier5 |
C |
T |
1: 155,098,692 (GRCm38) |
V247M |
probably damaging |
Het |
Ift46 |
C |
T |
9: 44,778,595 (GRCm38) |
|
probably benign |
Het |
Il12b |
A |
G |
11: 44,407,894 (GRCm38) |
T59A |
probably benign |
Het |
Insr |
A |
G |
8: 3,198,231 (GRCm38) |
L438P |
probably damaging |
Het |
Iqgap2 |
C |
T |
13: 95,732,890 (GRCm38) |
|
probably null |
Het |
Irx4 |
A |
T |
13: 73,267,553 (GRCm38) |
T154S |
possibly damaging |
Het |
Itgbl1 |
A |
G |
14: 123,857,489 (GRCm38) |
K309E |
probably benign |
Het |
Kcns2 |
T |
A |
15: 34,839,703 (GRCm38) |
L404* |
probably null |
Het |
Kif2c |
T |
C |
4: 117,162,029 (GRCm38) |
E644G |
possibly damaging |
Het |
Klhl22 |
T |
C |
16: 17,776,805 (GRCm38) |
L266P |
probably damaging |
Het |
Krt71 |
T |
A |
15: 101,738,329 (GRCm38) |
K315* |
probably null |
Het |
Lca5 |
T |
C |
9: 83,395,530 (GRCm38) |
N587S |
probably benign |
Het |
Lrp1b |
T |
A |
2: 41,295,669 (GRCm38) |
M1459L |
|
Het |
Lrrtm2 |
T |
C |
18: 35,213,592 (GRCm38) |
K219R |
probably damaging |
Het |
Mcmbp |
T |
C |
7: 128,704,517 (GRCm38) |
D459G |
probably damaging |
Het |
Megf8 |
A |
G |
7: 25,348,942 (GRCm38) |
H1680R |
probably damaging |
Het |
Mia3 |
A |
G |
1: 183,334,775 (GRCm38) |
S301P |
probably benign |
Het |
Mtrr |
A |
G |
13: 68,564,402 (GRCm38) |
Y622H |
probably damaging |
Het |
Myo7b |
T |
A |
18: 31,966,239 (GRCm38) |
Q1710L |
probably damaging |
Het |
Nab1 |
T |
C |
1: 52,480,995 (GRCm38) |
N276D |
probably damaging |
Het |
Nalcn |
C |
T |
14: 123,302,890 (GRCm38) |
R1127H |
probably damaging |
Het |
Nbas |
T |
A |
12: 13,274,219 (GRCm38) |
I110N |
probably damaging |
Het |
Nfe2l3 |
C |
T |
6: 51,457,296 (GRCm38) |
Q279* |
probably null |
Het |
Nlrp9c |
C |
T |
7: 26,365,015 (GRCm38) |
E963K |
probably benign |
Het |
Nsmaf |
A |
G |
4: 6,416,586 (GRCm38) |
V569A |
probably benign |
Het |
Olfr1066 |
T |
C |
2: 86,456,068 (GRCm38) |
T68A |
probably benign |
Het |
Olfr1338 |
T |
C |
4: 118,754,175 (GRCm38) |
Y123C |
possibly damaging |
Het |
Olfr199 |
T |
A |
16: 59,215,920 (GRCm38) |
D231V |
probably benign |
Het |
Olfr273 |
C |
T |
4: 52,856,421 (GRCm38) |
V31I |
probably benign |
Het |
Olfr481 |
T |
C |
7: 108,081,192 (GRCm38) |
S133P |
not run |
Het |
Olfr669 |
A |
T |
7: 104,939,431 (GRCm38) |
I302F |
probably benign |
Het |
Olfr69 |
T |
A |
7: 103,767,930 (GRCm38) |
I156F |
probably benign |
Het |
Olfr851 |
T |
A |
9: 19,497,102 (GRCm38) |
M118K |
probably damaging |
Het |
Olfr857 |
A |
T |
9: 19,712,887 (GRCm38) |
D20V |
probably damaging |
Het |
Olfr933 |
T |
A |
9: 38,975,721 (GRCm38) |
V15E |
probably benign |
Het |
Paf1 |
A |
G |
7: 28,396,928 (GRCm38) |
Y322C |
probably damaging |
Het |
Pcdha2 |
C |
A |
18: 36,939,385 (GRCm38) |
A23D |
possibly damaging |
Het |
Pcdhb6 |
G |
A |
18: 37,335,172 (GRCm38) |
C382Y |
probably damaging |
Het |
Pdzd7 |
C |
T |
19: 45,045,606 (GRCm38) |
G13D |
probably damaging |
Het |
Pik3r2 |
T |
C |
8: 70,769,381 (GRCm38) |
N586S |
probably benign |
Het |
Pik3r3 |
T |
A |
4: 116,270,830 (GRCm38) |
D119E |
probably benign |
Het |
Pkd2l1 |
T |
A |
19: 44,153,715 (GRCm38) |
I535F |
probably benign |
Het |
Ppfia3 |
T |
C |
7: 45,361,446 (GRCm38) |
|
probably null |
Het |
Ppl |
T |
A |
16: 5,112,996 (GRCm38) |
Q53L |
possibly damaging |
Het |
Rimbp3 |
T |
G |
16: 17,211,204 (GRCm38) |
S831A |
probably benign |
Het |
Rnps1 |
A |
G |
17: 24,418,530 (GRCm38) |
T49A |
unknown |
Het |
Rpl7a |
T |
A |
2: 26,912,007 (GRCm38) |
|
probably null |
Het |
Rrm2b |
T |
A |
15: 37,931,647 (GRCm38) |
E248D |
probably benign |
Het |
Sdhaf4 |
A |
G |
1: 23,996,358 (GRCm38) |
F70L |
probably damaging |
Het |
Sel1l3 |
A |
T |
5: 53,116,409 (GRCm38) |
S1038R |
probably benign |
Het |
Selenoo |
T |
A |
15: 89,089,478 (GRCm38) |
F124I |
probably benign |
Het |
Setbp1 |
A |
T |
18: 78,857,486 (GRCm38) |
Y989N |
probably damaging |
Het |
Slc1a7 |
A |
G |
4: 108,002,203 (GRCm38) |
E163G |
possibly damaging |
Het |
Slc22a2 |
T |
C |
17: 12,612,391 (GRCm38) |
F356S |
probably damaging |
Het |
Slc24a4 |
C |
T |
12: 102,239,176 (GRCm38) |
P378L |
probably benign |
Het |
Slc4a1ap |
A |
G |
5: 31,527,527 (GRCm38) |
D169G |
probably benign |
Het |
Slc4a7 |
T |
A |
14: 14,757,421 (GRCm38) |
V422D |
probably damaging |
Het |
Slitrk6 |
T |
C |
14: 110,749,863 (GRCm38) |
Y804C |
probably damaging |
Het |
Smarcad1 |
T |
A |
6: 65,110,376 (GRCm38) |
H906Q |
probably benign |
Het |
Smn1 |
A |
G |
13: 100,127,865 (GRCm38) |
T109A |
probably damaging |
Het |
Sntb2 |
A |
G |
8: 106,981,312 (GRCm38) |
N236S |
probably damaging |
Het |
Spag9 |
T |
A |
11: 94,114,351 (GRCm38) |
|
probably null |
Het |
Spg11 |
C |
A |
2: 122,058,429 (GRCm38) |
G2154W |
probably damaging |
Het |
Srsf6 |
T |
C |
2: 162,934,569 (GRCm38) |
S278P |
unknown |
Het |
Stambp |
C |
T |
6: 83,563,906 (GRCm38) |
V98I |
not run |
Het |
Suco |
T |
C |
1: 161,862,211 (GRCm38) |
D89G |
possibly damaging |
Het |
Suox |
C |
T |
10: 128,671,041 (GRCm38) |
V373I |
probably benign |
Het |
Sv2b |
T |
A |
7: 75,147,728 (GRCm38) |
|
probably null |
Het |
Tatdn2 |
T |
C |
6: 113,704,701 (GRCm38) |
L565P |
probably damaging |
Het |
Tbpl2 |
T |
A |
2: 24,094,700 (GRCm38) |
E145V |
probably benign |
Het |
Tlr1 |
T |
C |
5: 64,925,228 (GRCm38) |
I669V |
not run |
Het |
Tmc1 |
A |
T |
19: 20,868,389 (GRCm38) |
F157I |
probably damaging |
Het |
Tmem26 |
T |
G |
10: 68,724,092 (GRCm38) |
|
probably null |
Het |
Tmem33 |
A |
T |
5: 67,286,133 (GRCm38) |
I218F |
probably benign |
Het |
Tmem94 |
T |
A |
11: 115,794,174 (GRCm38) |
D862E |
probably damaging |
Het |
Tnr |
T |
C |
1: 159,884,862 (GRCm38) |
|
probably null |
Het |
Tnrc6c |
T |
C |
11: 117,741,780 (GRCm38) |
S1103P |
probably benign |
Het |
Tomm70a |
T |
A |
16: 57,146,044 (GRCm38) |
Y453* |
probably null |
Het |
Trabd |
C |
A |
15: 89,085,290 (GRCm38) |
R229S |
possibly damaging |
Het |
Trappc10 |
T |
C |
10: 78,193,418 (GRCm38) |
D1095G |
probably damaging |
Het |
Trim27 |
A |
G |
13: 21,192,461 (GRCm38) |
T460A |
possibly damaging |
Het |
Tsen54 |
T |
G |
11: 115,821,705 (GRCm38) |
D433E |
probably benign |
Het |
Ubap2 |
A |
G |
4: 41,235,515 (GRCm38) |
|
probably null |
Het |
Vat1l |
A |
T |
8: 114,289,392 (GRCm38) |
N341Y |
possibly damaging |
Het |
Vmn2r82 |
C |
G |
10: 79,396,442 (GRCm38) |
Y758* |
probably null |
Het |
Vps16 |
T |
G |
2: 130,438,179 (GRCm38) |
V108G |
probably damaging |
Het |
Vps53 |
T |
A |
11: 76,077,074 (GRCm38) |
I585F |
possibly damaging |
Het |
Wrnip1 |
G |
A |
13: 32,816,281 (GRCm38) |
V424M |
probably benign |
Het |
Yif1a |
G |
A |
19: 5,089,790 (GRCm38) |
V88M |
possibly damaging |
Het |
Zfat |
T |
C |
15: 68,181,120 (GRCm38) |
Y275C |
probably damaging |
Het |
Zfhx3 |
A |
G |
8: 108,793,248 (GRCm38) |
E334G |
probably damaging |
Het |
Zfp277 |
T |
C |
12: 40,315,853 (GRCm38) |
D539G |
possibly damaging |
Het |
Zfp292 |
A |
T |
4: 34,808,384 (GRCm38) |
N1558K |
probably benign |
Het |
Zfp3 |
A |
G |
11: 70,772,073 (GRCm38) |
K286R |
probably benign |
Het |
Zfp366 |
T |
C |
13: 99,229,515 (GRCm38) |
C395R |
probably damaging |
Het |
|
Other mutations in Stag3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00095:Stag3
|
APN |
5 |
138,299,138 (GRCm38) |
missense |
probably damaging |
1.00 |
IGL00336:Stag3
|
APN |
5 |
138,297,659 (GRCm38) |
missense |
probably benign |
0.42 |
IGL00514:Stag3
|
APN |
5 |
138,300,135 (GRCm38) |
missense |
probably damaging |
1.00 |
IGL00961:Stag3
|
APN |
5 |
138,298,349 (GRCm38) |
missense |
probably benign |
0.01 |
IGL01923:Stag3
|
APN |
5 |
138,289,230 (GRCm38) |
missense |
probably damaging |
1.00 |
IGL02252:Stag3
|
APN |
5 |
138,302,548 (GRCm38) |
missense |
probably damaging |
1.00 |
IGL02424:Stag3
|
APN |
5 |
138,291,366 (GRCm38) |
missense |
probably damaging |
1.00 |
IGL02424:Stag3
|
APN |
5 |
138,281,985 (GRCm38) |
nonsense |
probably null |
|
IGL02869:Stag3
|
APN |
5 |
138,282,693 (GRCm38) |
missense |
probably damaging |
0.96 |
thor
|
UTSW |
5 |
138,301,036 (GRCm38) |
critical splice donor site |
probably null |
|
R0016:Stag3
|
UTSW |
5 |
138,291,381 (GRCm38) |
missense |
possibly damaging |
0.50 |
R0038:Stag3
|
UTSW |
5 |
138,301,036 (GRCm38) |
critical splice donor site |
probably null |
|
R0038:Stag3
|
UTSW |
5 |
138,301,036 (GRCm38) |
critical splice donor site |
probably null |
|
R0046:Stag3
|
UTSW |
5 |
138,283,023 (GRCm38) |
splice site |
probably benign |
|
R0046:Stag3
|
UTSW |
5 |
138,283,023 (GRCm38) |
splice site |
probably benign |
|
R1455:Stag3
|
UTSW |
5 |
138,311,735 (GRCm38) |
missense |
probably benign |
0.00 |
R1512:Stag3
|
UTSW |
5 |
138,297,985 (GRCm38) |
missense |
probably benign |
0.32 |
R1530:Stag3
|
UTSW |
5 |
138,297,412 (GRCm38) |
missense |
probably damaging |
0.99 |
R1608:Stag3
|
UTSW |
5 |
138,298,639 (GRCm38) |
splice site |
probably null |
|
R1736:Stag3
|
UTSW |
5 |
138,304,509 (GRCm38) |
splice site |
probably benign |
|
R1969:Stag3
|
UTSW |
5 |
138,300,138 (GRCm38) |
missense |
probably damaging |
0.99 |
R2034:Stag3
|
UTSW |
5 |
138,298,001 (GRCm38) |
missense |
possibly damaging |
0.82 |
R2214:Stag3
|
UTSW |
5 |
138,301,266 (GRCm38) |
missense |
possibly damaging |
0.92 |
R2281:Stag3
|
UTSW |
5 |
138,298,284 (GRCm38) |
missense |
probably damaging |
1.00 |
R2411:Stag3
|
UTSW |
5 |
138,283,028 (GRCm38) |
splice site |
probably benign |
|
R3792:Stag3
|
UTSW |
5 |
138,298,349 (GRCm38) |
missense |
probably benign |
0.01 |
R3887:Stag3
|
UTSW |
5 |
138,298,839 (GRCm38) |
missense |
probably damaging |
0.99 |
R4255:Stag3
|
UTSW |
5 |
138,290,881 (GRCm38) |
missense |
probably damaging |
0.98 |
R4777:Stag3
|
UTSW |
5 |
138,309,199 (GRCm38) |
unclassified |
probably benign |
|
R4842:Stag3
|
UTSW |
5 |
138,309,365 (GRCm38) |
splice site |
probably null |
|
R4854:Stag3
|
UTSW |
5 |
138,296,694 (GRCm38) |
splice site |
probably null |
|
R5045:Stag3
|
UTSW |
5 |
138,304,478 (GRCm38) |
missense |
probably damaging |
1.00 |
R5631:Stag3
|
UTSW |
5 |
138,295,877 (GRCm38) |
missense |
probably damaging |
0.96 |
R5729:Stag3
|
UTSW |
5 |
138,290,223 (GRCm38) |
missense |
possibly damaging |
0.76 |
R5894:Stag3
|
UTSW |
5 |
138,298,838 (GRCm38) |
missense |
probably damaging |
0.99 |
R6004:Stag3
|
UTSW |
5 |
138,289,206 (GRCm38) |
missense |
probably damaging |
1.00 |
R6172:Stag3
|
UTSW |
5 |
138,299,843 (GRCm38) |
missense |
probably benign |
0.41 |
R6503:Stag3
|
UTSW |
5 |
138,304,420 (GRCm38) |
missense |
probably damaging |
0.96 |
R6545:Stag3
|
UTSW |
5 |
138,298,352 (GRCm38) |
missense |
possibly damaging |
0.84 |
R6736:Stag3
|
UTSW |
5 |
138,301,499 (GRCm38) |
missense |
probably damaging |
0.98 |
R6861:Stag3
|
UTSW |
5 |
138,304,707 (GRCm38) |
missense |
possibly damaging |
0.55 |
R7012:Stag3
|
UTSW |
5 |
138,297,609 (GRCm38) |
splice site |
probably null |
|
R7358:Stag3
|
UTSW |
5 |
138,301,508 (GRCm38) |
missense |
probably damaging |
1.00 |
R7392:Stag3
|
UTSW |
5 |
138,291,366 (GRCm38) |
missense |
probably damaging |
1.00 |
R7395:Stag3
|
UTSW |
5 |
138,281,945 (GRCm38) |
missense |
probably benign |
0.33 |
R7818:Stag3
|
UTSW |
5 |
138,301,443 (GRCm38) |
missense |
probably benign |
0.00 |
R8017:Stag3
|
UTSW |
5 |
138,301,203 (GRCm38) |
missense |
possibly damaging |
0.80 |
R8019:Stag3
|
UTSW |
5 |
138,301,203 (GRCm38) |
missense |
possibly damaging |
0.80 |
R8076:Stag3
|
UTSW |
5 |
138,283,142 (GRCm38) |
missense |
probably damaging |
0.96 |
R8393:Stag3
|
UTSW |
5 |
138,296,755 (GRCm38) |
missense |
probably damaging |
0.98 |
R8405:Stag3
|
UTSW |
5 |
138,304,652 (GRCm38) |
missense |
probably damaging |
0.99 |
R8417:Stag3
|
UTSW |
5 |
138,308,588 (GRCm38) |
missense |
probably benign |
|
R8734:Stag3
|
UTSW |
5 |
138,311,788 (GRCm38) |
missense |
probably benign |
0.36 |
R8848:Stag3
|
UTSW |
5 |
138,290,266 (GRCm38) |
missense |
probably null |
0.97 |
R8966:Stag3
|
UTSW |
5 |
138,291,404 (GRCm38) |
missense |
probably damaging |
0.99 |
R9029:Stag3
|
UTSW |
5 |
138,298,034 (GRCm38) |
missense |
probably damaging |
1.00 |
R9292:Stag3
|
UTSW |
5 |
138,301,450 (GRCm38) |
missense |
probably benign |
0.01 |
R9410:Stag3
|
UTSW |
5 |
138,299,339 (GRCm38) |
missense |
possibly damaging |
0.95 |
R9645:Stag3
|
UTSW |
5 |
138,301,439 (GRCm38) |
missense |
possibly damaging |
0.78 |
R9723:Stag3
|
UTSW |
5 |
138,299,841 (GRCm38) |
missense |
probably benign |
|
Z1177:Stag3
|
UTSW |
5 |
138,301,292 (GRCm38) |
missense |
possibly damaging |
0.65 |
|