Mutagenetix > Incidental Mutation

Incidental Mutation 'R7388:Vmn1r79'

573256

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r79

Ensembl Gene

ENSMUSG00000096735

Gene Name

vomeronasal 1 receptor 79

Synonyms

Gm9807

MMRRC Submission

045470-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.066) question?

Stock #

R7388 (G1)

Quality Score

208.009

Status

Not validated

Chromosome

Chromosomal Location

11910120-11911040 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 11910668 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Stop codon at position 183 (Y183*)

Ref Sequence

ENSEMBL: ENSMUSP00000056232 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000062811] [ENSMUST00000226953] [ENSMUST00000227530]

AlphaFold

Q8R285

Predicted Effect

probably null
Transcript: ENSMUST00000062811
AA Change: Y183*

SMART Domains

Protein: ENSMUSP00000056232
Gene: ENSMUSG00000096735
AA Change: Y183*

Domain	Start	End	E-Value	Type
Pfam:TAS2R	7	302	4.9e-9	PFAM
Pfam:7tm_1	27	292	2.8e-7	PFAM
Pfam:V1R	34	298	1.7e-35	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000226953
AA Change: Y183*

Predicted Effect

probably null
Transcript: ENSMUST00000227530
AA Change: Y183*

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

100% (63/63)

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Afg3l2	T	C	18: 67,556,023 (GRCm39)	E436G	probably damaging	Het
Agbl5	T	A	5: 31,060,583 (GRCm39)	L759*	probably null	Het
Ankrd13b	T	C	11: 77,363,583 (GRCm39)	D460G	probably benign	Het
Apol10a	A	G	15: 77,373,225 (GRCm39)	D287G	possibly damaging	Het
Arhgap44	A	T	11: 64,915,094 (GRCm39)	Y391*	probably null	Het
Asz1	G	T	6: 18,074,900 (GRCm39)	S271R	probably benign	Het
AW554918	A	G	18: 25,473,170 (GRCm39)	N325D	probably benign	Het
Brinp2	A	T	1: 158,082,579 (GRCm39)	L247Q	probably damaging	Het
Casz1	A	G	4: 149,036,850 (GRCm39)	D1704G	unknown	Het
Cdk5rap1	G	A	2: 154,202,595 (GRCm39)	R212W	probably damaging	Het
Cdkl2	T	A	5: 92,167,318 (GRCm39)	T444S	probably benign	Het
Cers2	T	G	3: 95,228,656 (GRCm39)	F160V	probably benign	Het
Cfap276	T	C	3: 108,450,815 (GRCm39)	F86L	possibly damaging	Het
Cga	T	A	4: 34,907,076 (GRCm39)	M99K	probably benign	Het
Cspp1	C	T	1: 10,135,572 (GRCm39)	R138*	probably null	Het
Dao	T	G	5: 114,153,273 (GRCm39)	*133E	probably null	Het
Ddx1	A	T	12: 13,275,456 (GRCm39)	C544S	probably null	Het
Dgkq	A	T	5: 108,806,112 (GRCm39)	V98E	probably damaging	Het
Dnah6	T	A	6: 73,169,300 (GRCm39)	T434S	possibly damaging	Het
Dntt	A	G	19: 41,027,418 (GRCm39)	N162D	probably benign	Het
Dpysl5	T	C	5: 30,902,805 (GRCm39)	V79A	probably benign	Het
Efcab3	T	C	11: 104,611,871 (GRCm39)	L571P	probably damaging	Het
Ep300	T	C	15: 81,532,567 (GRCm39)	C1602R	unknown	Het
Flrt3	C	T	2: 140,503,672 (GRCm39)		probably null	Het
Gk2	A	G	5: 97,604,757 (GRCm39)	V27A	probably damaging	Het
Gnpat	T	G	8: 125,614,553 (GRCm39)	M663R	probably benign	Het
Hc	A	T	2: 34,874,859 (GRCm39)		probably null	Het
Il12rb1	A	G	8: 71,263,271 (GRCm39)	Y67C	probably damaging	Het
Ints15	G	A	5: 143,297,600 (GRCm39)	A149V	probably benign	Het
Kmt2b	C	T	7: 30,281,385 (GRCm39)	D1229N	probably damaging	Het
Lamc1	T	C	1: 153,124,822 (GRCm39)	T650A	probably damaging	Het
Lrp1	G	A	10: 127,419,766 (GRCm39)	R948*	probably null	Het
Map3k21	T	C	8: 126,654,336 (GRCm39)	I385T	probably damaging	Het
Mmrn1	T	A	6: 60,953,236 (GRCm39)	S506T	probably benign	Het
Nlrp1a	A	G	11: 71,014,023 (GRCm39)	F409S	probably damaging	Het
Nlrp3	T	A	11: 59,455,892 (GRCm39)	I896N	probably benign	Het
Noxred1	C	A	12: 87,273,799 (GRCm39)	V81L	probably damaging	Het
Nrcam	A	T	12: 44,645,272 (GRCm39)	I1225F	probably damaging	Het
Or2z2	C	T	11: 58,346,481 (GRCm39)	C98Y	probably damaging	Het
Otos	T	A	1: 92,572,241 (GRCm39)		probably null	Het
Pcdh20	A	G	14: 88,706,103 (GRCm39)	I399T	probably benign	Het
Pkhd1	C	T	1: 20,309,528 (GRCm39)	V2807I	not run	Het
Prrx2	A	G	2: 30,770,902 (GRCm39)	E235G	probably damaging	Het
Rab13	T	C	3: 90,128,327 (GRCm39)	I41T	probably damaging	Het
Rai1	A	C	11: 60,080,201 (GRCm39)	T1422P	possibly damaging	Het
Rcn1	C	T	2: 105,222,336 (GRCm39)	V217M	probably damaging	Het
Scn2a	T	A	2: 65,518,998 (GRCm39)	V408E	probably damaging	Het
Sec16a	C	T	2: 26,318,376 (GRCm39)	A121T		Het
Slc35d1	A	G	4: 103,046,982 (GRCm39)		probably null	Het
Slc39a6	A	T	18: 24,717,106 (GRCm39)	V642E	probably damaging	Het
Slc6a19	G	A	13: 73,841,203 (GRCm39)	A69V	probably benign	Het
Spink6	A	T	18: 44,215,386 (GRCm39)	T79S	probably damaging	Het
Spire1	T	C	18: 67,652,950 (GRCm39)	D170G	probably damaging	Het
Sugp1	T	C	8: 70,505,269 (GRCm39)	S79P	probably damaging	Het
Syne3	A	G	12: 104,934,167 (GRCm39)	Y201H	probably damaging	Het
Tbc1d10a	T	C	11: 4,155,858 (GRCm39)		probably null	Het
Tmem14a	C	T	1: 21,299,735 (GRCm39)	Q122*	probably null	Het
Tmem161b	C	A	13: 84,370,537 (GRCm39)		probably benign	Het
Trmt61a	A	G	12: 111,645,321 (GRCm39)	I86V	possibly damaging	Het
Tubgcp4	G	A	2: 121,020,447 (GRCm39)		probably null	Het
Vmn2r11	A	T	5: 109,202,742 (GRCm39)	W112R	probably benign	Het
Vpreb1a	T	C	16: 16,686,516 (GRCm39)	K125E	probably benign	Het
Wdr6	A	T	9: 108,451,971 (GRCm39)	F637L	probably damaging	Het

Other mutations in Vmn1r79

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00592:Vmn1r79	APN	7	11,910,934 (GRCm39)	missense	probably benign	0.05
IGL01431:Vmn1r79	APN	7	11,910,327 (GRCm39)	missense	possibly damaging	0.88
IGL01953:Vmn1r79	APN	7	11,910,382 (GRCm39)	missense	probably damaging	1.00
PIT4418001:Vmn1r79	UTSW	7	11,910,766 (GRCm39)	missense	probably damaging	1.00
R0831:Vmn1r79	UTSW	7	11,910,990 (GRCm39)	missense	probably damaging	0.98
R1791:Vmn1r79	UTSW	7	11,910,358 (GRCm39)	missense	probably damaging	1.00
R1869:Vmn1r79	UTSW	7	11,910,574 (GRCm39)	missense	probably benign	0.00
R3713:Vmn1r79	UTSW	7	11,910,139 (GRCm39)	missense	possibly damaging	0.66
R4210:Vmn1r79	UTSW	7	11,910,415 (GRCm39)	missense	possibly damaging	0.46
R4243:Vmn1r79	UTSW	7	11,910,971 (GRCm39)	nonsense	probably null
R4244:Vmn1r79	UTSW	7	11,910,971 (GRCm39)	nonsense	probably null
R4839:Vmn1r79	UTSW	7	11,910,361 (GRCm39)	missense	probably benign	0.30
R5677:Vmn1r79	UTSW	7	11,910,928 (GRCm39)	missense	possibly damaging	0.77
R6048:Vmn1r79	UTSW	7	11,910,448 (GRCm39)	missense	probably damaging	0.99
R7751:Vmn1r79	UTSW	7	11,910,762 (GRCm39)	nonsense	probably null
R8207:Vmn1r79	UTSW	7	11,910,415 (GRCm39)	missense	possibly damaging	0.46
R9462:Vmn1r79	UTSW	7	11,910,261 (GRCm39)	missense	probably damaging	1.00
R9664:Vmn1r79	UTSW	7	11,910,582 (GRCm39)	missense	probably benign	0.00
R9749:Vmn1r79	UTSW	7	11,910,450 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCCAATAACTCCAGGTGGATAAAG -3'
(R):5'- TGACAAATGTGCACAGCAGG -3'

Sequencing Primer
(F):5'- CTCCAGGTGGATAAAGCTTAAATAC -3'
(R):5'- CACAGCAGGATGAGGATAGTTTG -3'

Posted On

2019-09-13