Incidental Mutation 'R7401:Vmn1r45'
ID 574163
Institutional Source Beutler Lab
Gene Symbol Vmn1r45
Ensembl Gene ENSMUSG00000044248
Gene Name vomeronasal 1 receptor 45
Synonyms V1ra2, V1r2
MMRRC Submission 045483-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.064) question?
Stock # R7401 (G1)
Quality Score 225.009
Status Not validated
Chromosome 6
Chromosomal Location 89908632-89917489 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 89910416 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 185 (T185S)
Ref Sequence ENSEMBL: ENSMUSP00000052123 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000054202] [ENSMUST00000226167] [ENSMUST00000227122] [ENSMUST00000227426] [ENSMUST00000227571] [ENSMUST00000227977] [ENSMUST00000228492] [ENSMUST00000228662]
AlphaFold Q8VIC7
Predicted Effect possibly damaging
Transcript: ENSMUST00000054202
AA Change: T185S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000052123
Gene: ENSMUSG00000044248
AA Change: T185S

DomainStartEndE-ValueType
Pfam:TAS2R 26 315 2.5e-10 PFAM
Pfam:V1R 54 318 1.5e-136 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000226167
AA Change: T65S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227122
AA Change: T65S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227426
AA Change: T185S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227571
AA Change: T65S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227977
AA Change: T185S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228492
AA Change: T65S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228662
AA Change: T185S

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2610318N02Rik A T 16: 16,936,268 (GRCm39) L152Q probably benign Het
Abcg3 A T 5: 105,114,640 (GRCm39) N292K probably damaging Het
Adamts3 T A 5: 89,855,309 (GRCm39) probably null Het
Adgrg7 T C 16: 56,562,781 (GRCm39) N519D probably benign Het
Adsl A G 15: 80,846,983 (GRCm39) H263R probably damaging Het
Ak9 A T 10: 41,299,000 (GRCm39) D1567V unknown Het
Bscl2 T C 19: 8,823,914 (GRCm39) F280L possibly damaging Het
Cacna1b T A 2: 24,569,306 (GRCm39) T873S probably benign Het
Cacna1c T C 6: 119,029,669 (GRCm39) probably null Het
Cast G T 13: 74,956,577 (GRCm39) A18E unknown Het
Cd207 A C 6: 83,654,830 (GRCm39) probably benign Het
Cd79b A G 11: 106,203,678 (GRCm39) S130P probably benign Het
Cfap52 A T 11: 67,840,459 (GRCm39) N157K probably benign Het
Cfap57 C T 4: 118,472,128 (GRCm39) V84I probably benign Het
Chaf1b G T 16: 93,681,268 (GRCm39) probably benign Het
Cntn1 A G 15: 92,215,870 (GRCm39) I968V probably benign Het
Cntn5 C T 9: 9,833,466 (GRCm39) V362I probably benign Het
Crem A G 18: 3,295,329 (GRCm39) S80P probably damaging Het
Csnk1g3 C T 18: 54,063,390 (GRCm39) T267I probably damaging Het
Cyth1 A T 11: 118,073,077 (GRCm39) N274K possibly damaging Het
Dicer1 C T 12: 104,678,537 (GRCm39) G594S probably benign Het
Enpp1 C T 10: 24,521,180 (GRCm39) C849Y probably damaging Het
Fam193a A G 5: 34,622,979 (GRCm39) E1189G possibly damaging Het
Fermt1 C A 2: 132,759,479 (GRCm39) V426L probably benign Het
Fes A G 7: 80,028,524 (GRCm39) probably null Het
Gmeb1 C A 4: 131,953,085 (GRCm39) L560F probably damaging Het
Hace1 T C 10: 45,546,722 (GRCm39) L452P probably damaging Het
Hecw2 T A 1: 53,943,502 (GRCm39) H975L probably damaging Het
Idh2 GGTCCCAG GG 7: 79,748,077 (GRCm39) probably benign Het
Il1r2 T A 1: 40,162,370 (GRCm39) C338S probably damaging Het
Iqcn T C 8: 71,169,921 (GRCm39) I1337T probably benign Het
Kcnb1 T C 2: 167,030,204 (GRCm39) S114G probably damaging Het
Lce1c A T 3: 92,587,623 (GRCm39) T17S unknown Het
Lhfpl4 C A 6: 113,153,627 (GRCm39) L141F possibly damaging Het
Ms4a14 T C 19: 11,279,594 (GRCm39) E988G possibly damaging Het
Naip5 G T 13: 100,356,205 (GRCm39) Q1137K not run Het
Naip5 T C 13: 100,356,204 (GRCm39) Q1137R probably benign Het
Neurod1 T A 2: 79,285,290 (GRCm39) D31V probably benign Het
Neurod4 A G 10: 130,106,927 (GRCm39) C116R probably damaging Het
Nisch A G 14: 30,928,537 (GRCm39) V28A probably benign Het
Odad1 A C 7: 45,592,189 (GRCm39) Q323P probably damaging Het
Or4a72 A G 2: 89,405,449 (GRCm39) V207A probably benign Het
Or5d44 T G 2: 88,141,772 (GRCm39) M123L probably benign Het
Pabpc4l T A 3: 46,401,024 (GRCm39) R207W probably damaging Het
Pabpc4l A T 3: 46,400,687 (GRCm39) I319N probably damaging Het
Pcm1 G A 8: 41,762,568 (GRCm39) D1371N probably damaging Het
Peg10 G GGTC 6: 4,756,452 (GRCm39) probably benign Het
Plxnc1 C T 10: 94,706,867 (GRCm39) A557T probably benign Het
Prkdc T A 16: 15,466,602 (GRCm39) V58D probably damaging Het
Prpf40a A G 2: 53,046,959 (GRCm39) V259A probably benign Het
Psmd3 A T 11: 98,576,466 (GRCm39) T123S probably benign Het
Ptgr2 G T 12: 84,339,103 (GRCm39) probably benign Het
Ptprr A G 10: 115,884,141 (GRCm39) H66R probably benign Het
Rftn2 A G 1: 55,233,401 (GRCm39) probably null Het
Rsph14 T A 10: 74,865,628 (GRCm39) E70V possibly damaging Het
Slc24a5 G A 2: 124,930,111 (GRCm39) V471I probably benign Het
Sorbs1 G C 19: 40,365,244 (GRCm39) R180G probably benign Het
Spag9 A T 11: 93,988,515 (GRCm39) T862S probably benign Het
Ssbp2 T A 13: 91,839,002 (GRCm39) D291E probably benign Het
Supt5 T C 7: 28,023,197 (GRCm39) K329E probably damaging Het
Syne2 G T 12: 76,014,155 (GRCm39) K3115N probably damaging Het
Tars1 A T 15: 11,392,095 (GRCm39) L239* probably null Het
Tbxa2r T C 10: 81,168,625 (GRCm39) Y105H probably benign Het
Tesk1 T A 4: 43,445,743 (GRCm39) D265E probably damaging Het
Tril T C 6: 53,795,266 (GRCm39) D652G possibly damaging Het
Tsga10 T C 1: 37,873,268 (GRCm39) R204G probably null Het
Twnk A G 19: 45,000,219 (GRCm39) D645G probably benign Het
Umodl1 A T 17: 31,217,122 (GRCm39) D1118V probably damaging Het
Unc119 T C 11: 78,238,071 (GRCm39) I83T probably benign Het
Unc80 T C 1: 66,685,574 (GRCm39) W2233R possibly damaging Het
Vmn2r111 G T 17: 22,790,067 (GRCm39) T313K possibly damaging Het
Wdr4 A G 17: 31,728,806 (GRCm39) L123S probably damaging Het
Zfpm2 A G 15: 40,966,386 (GRCm39) E957G possibly damaging Het
Other mutations in Vmn1r45
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00264:Vmn1r45 APN 6 89,910,646 (GRCm39) missense probably damaging 1.00
IGL02010:Vmn1r45 APN 6 89,910,668 (GRCm39) missense probably damaging 1.00
IGL02124:Vmn1r45 APN 6 89,910,035 (GRCm39) missense probably benign 0.03
IGL02413:Vmn1r45 APN 6 89,910,503 (GRCm39) missense possibly damaging 0.75
R0123:Vmn1r45 UTSW 6 89,910,492 (GRCm39) nonsense probably null
R0225:Vmn1r45 UTSW 6 89,910,492 (GRCm39) nonsense probably null
R1513:Vmn1r45 UTSW 6 89,910,058 (GRCm39) missense probably damaging 0.97
R2154:Vmn1r45 UTSW 6 89,910,965 (GRCm39) missense possibly damaging 0.91
R3082:Vmn1r45 UTSW 6 89,910,724 (GRCm39) missense probably benign 0.03
R3781:Vmn1r45 UTSW 6 89,910,799 (GRCm39) missense probably benign
R4982:Vmn1r45 UTSW 6 89,910,847 (GRCm39) missense probably damaging 0.99
R5086:Vmn1r45 UTSW 6 89,910,082 (GRCm39) missense probably benign 0.06
R5327:Vmn1r45 UTSW 6 89,910,123 (GRCm39) missense possibly damaging 0.79
R5470:Vmn1r45 UTSW 6 89,910,698 (GRCm39) missense probably benign 0.04
R6681:Vmn1r45 UTSW 6 89,910,985 (GRCm39) start gained probably benign
R7046:Vmn1r45 UTSW 6 89,910,538 (GRCm39) missense probably benign 0.00
R7050:Vmn1r45 UTSW 6 89,910,703 (GRCm39) missense probably damaging 0.97
R7171:Vmn1r45 UTSW 6 89,910,316 (GRCm39) missense probably damaging 1.00
R7236:Vmn1r45 UTSW 6 89,910,133 (GRCm39) missense probably benign 0.15
R7417:Vmn1r45 UTSW 6 89,910,035 (GRCm39) missense probably benign 0.03
R8068:Vmn1r45 UTSW 6 89,910,261 (GRCm39) missense possibly damaging 0.53
R8223:Vmn1r45 UTSW 6 89,910,074 (GRCm39) missense probably damaging 0.99
R8942:Vmn1r45 UTSW 6 89,910,876 (GRCm39) missense probably benign 0.00
RF019:Vmn1r45 UTSW 6 89,910,091 (GRCm39) missense probably damaging 0.99
X0026:Vmn1r45 UTSW 6 89,910,724 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GGTACCTTGAAGATGCTGGG -3'
(R):5'- GTACAGAGTTTTGAGGGGCC -3'

Sequencing Primer
(F):5'- AAGATGCTGGGCCTGTTTCC -3'
(R):5'- TGTACCACCAGCATGTTGAG -3'
Posted On 2019-09-13