Incidental Mutation 'R0627:Trip12'
ID |
57574 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Trip12
|
Ensembl Gene |
ENSMUSG00000026219 |
Gene Name |
thyroid hormone receptor interactor 12 |
Synonyms |
Gtl6, 1110036I07Rik, 6720416K24Rik |
MMRRC Submission |
038816-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R0627 (G1)
|
Quality Score |
161 |
Status
|
Validated
|
Chromosome |
1 |
Chromosomal Location |
84698910-84818237 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 84746318 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Phenylalanine
at position 487
(V487F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000140267
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000027421]
[ENSMUST00000185909]
[ENSMUST00000186465]
[ENSMUST00000186648]
[ENSMUST00000186894]
|
AlphaFold |
G5E870 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000027421
AA Change: V487F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000027421 Gene: ENSMUSG00000026219 AA Change: V487F
Domain | Start | End | E-Value | Type |
low complexity region
|
34 |
39 |
N/A |
INTRINSIC |
low complexity region
|
153 |
172 |
N/A |
INTRINSIC |
low complexity region
|
177 |
188 |
N/A |
INTRINSIC |
low complexity region
|
191 |
215 |
N/A |
INTRINSIC |
low complexity region
|
231 |
247 |
N/A |
INTRINSIC |
low complexity region
|
379 |
391 |
N/A |
INTRINSIC |
low complexity region
|
392 |
406 |
N/A |
INTRINSIC |
low complexity region
|
416 |
427 |
N/A |
INTRINSIC |
SCOP:d1ee4a_
|
446 |
660 |
5e-20 |
SMART |
PDB:1WA5|B
|
447 |
641 |
1e-5 |
PDB |
Pfam:WWE
|
765 |
831 |
7.6e-22 |
PFAM |
low complexity region
|
983 |
1006 |
N/A |
INTRINSIC |
low complexity region
|
1033 |
1047 |
N/A |
INTRINSIC |
low complexity region
|
1062 |
1073 |
N/A |
INTRINSIC |
low complexity region
|
1333 |
1344 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1362 |
N/A |
INTRINSIC |
Blast:HECTc
|
1363 |
1417 |
8e-8 |
BLAST |
Blast:HECTc
|
1573 |
1629 |
2e-24 |
BLAST |
HECTc
|
1636 |
2025 |
1.29e-177 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000185672
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000185909
|
SMART Domains |
Protein: ENSMUSP00000139986 Gene: ENSMUSG00000026219
Domain | Start | End | E-Value | Type |
low complexity region
|
195 |
214 |
N/A |
INTRINSIC |
low complexity region
|
219 |
230 |
N/A |
INTRINSIC |
low complexity region
|
233 |
257 |
N/A |
INTRINSIC |
low complexity region
|
273 |
289 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000186465
AA Change: V487F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000140224 Gene: ENSMUSG00000026219 AA Change: V487F
Domain | Start | End | E-Value | Type |
low complexity region
|
34 |
39 |
N/A |
INTRINSIC |
low complexity region
|
153 |
172 |
N/A |
INTRINSIC |
low complexity region
|
177 |
188 |
N/A |
INTRINSIC |
low complexity region
|
191 |
215 |
N/A |
INTRINSIC |
low complexity region
|
231 |
247 |
N/A |
INTRINSIC |
low complexity region
|
379 |
391 |
N/A |
INTRINSIC |
low complexity region
|
392 |
406 |
N/A |
INTRINSIC |
low complexity region
|
416 |
427 |
N/A |
INTRINSIC |
SCOP:d1ee4a_
|
446 |
660 |
5e-20 |
SMART |
PDB:1WA5|B
|
447 |
641 |
1e-5 |
PDB |
Pfam:WWE
|
761 |
831 |
2.2e-22 |
PFAM |
low complexity region
|
983 |
1006 |
N/A |
INTRINSIC |
low complexity region
|
1033 |
1047 |
N/A |
INTRINSIC |
low complexity region
|
1062 |
1073 |
N/A |
INTRINSIC |
low complexity region
|
1333 |
1344 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1362 |
N/A |
INTRINSIC |
Blast:HECTc
|
1363 |
1417 |
8e-8 |
BLAST |
Blast:HECTc
|
1573 |
1629 |
2e-24 |
BLAST |
HECTc
|
1636 |
2025 |
1.29e-177 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000186648
AA Change: V481F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000139563 Gene: ENSMUSG00000026219 AA Change: V481F
Domain | Start | End | E-Value | Type |
low complexity region
|
34 |
39 |
N/A |
INTRINSIC |
low complexity region
|
153 |
172 |
N/A |
INTRINSIC |
low complexity region
|
177 |
188 |
N/A |
INTRINSIC |
low complexity region
|
191 |
215 |
N/A |
INTRINSIC |
low complexity region
|
231 |
247 |
N/A |
INTRINSIC |
low complexity region
|
386 |
400 |
N/A |
INTRINSIC |
low complexity region
|
410 |
421 |
N/A |
INTRINSIC |
SCOP:d1ee4a_
|
440 |
654 |
5e-20 |
SMART |
PDB:1WA5|B
|
441 |
635 |
1e-5 |
PDB |
low complexity region
|
950 |
973 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1029 |
1040 |
N/A |
INTRINSIC |
low complexity region
|
1300 |
1311 |
N/A |
INTRINSIC |
low complexity region
|
1312 |
1329 |
N/A |
INTRINSIC |
Blast:HECTc
|
1330 |
1384 |
7e-8 |
BLAST |
Blast:HECTc
|
1540 |
1596 |
2e-24 |
BLAST |
HECTc
|
1603 |
1992 |
6.2e-180 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000186894
AA Change: V487F
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000140267 Gene: ENSMUSG00000026219 AA Change: V487F
Domain | Start | End | E-Value | Type |
low complexity region
|
34 |
39 |
N/A |
INTRINSIC |
low complexity region
|
153 |
172 |
N/A |
INTRINSIC |
low complexity region
|
177 |
188 |
N/A |
INTRINSIC |
low complexity region
|
191 |
215 |
N/A |
INTRINSIC |
low complexity region
|
231 |
247 |
N/A |
INTRINSIC |
low complexity region
|
379 |
391 |
N/A |
INTRINSIC |
low complexity region
|
392 |
406 |
N/A |
INTRINSIC |
low complexity region
|
416 |
427 |
N/A |
INTRINSIC |
SCOP:d1ee4a_
|
446 |
660 |
3e-20 |
SMART |
PDB:1WA5|B
|
447 |
641 |
7e-6 |
PDB |
Blast:ARM
|
476 |
516 |
6e-6 |
BLAST |
WWE
|
764 |
839 |
6.9e-25 |
SMART |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000190464
AA Change: V167F
|
Meta Mutation Damage Score |
0.2389 |
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.2%
- 20x: 94.2%
|
Validation Efficiency |
99% (111/112) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is an E3 ubiquitin-protein ligase involved in the degradation of the p19ARF/ARF isoform of CDKN2A, a tumor suppressor. The encoded protein also plays a role in the DNA damage response by regulating the stability of USP7, which regulates tumor suppressor p53. [provided by RefSeq, Jan 2017] PHENOTYPE: Mice homozygous for a targeted allele exhibit complete embryonic lethality during organogenesis associated with embryonic growth retardation and abnormal placenta development. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 105 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adm2 |
T |
A |
15: 89,208,508 (GRCm39) |
Y149* |
probably null |
Het |
Ahi1 |
G |
A |
10: 20,841,421 (GRCm39) |
R236H |
probably benign |
Het |
Armcx4 |
A |
G |
X: 133,596,572 (GRCm39) |
N2160S |
possibly damaging |
Het |
Asns |
A |
T |
6: 7,675,516 (GRCm39) |
D495E |
probably benign |
Het |
Atosb |
G |
T |
4: 43,036,242 (GRCm39) |
P163Q |
probably damaging |
Het |
Bcl9 |
A |
G |
3: 97,112,789 (GRCm39) |
V1222A |
probably damaging |
Het |
Cd46 |
A |
T |
1: 194,774,494 (GRCm39) |
C14S |
probably benign |
Het |
Cdk11b |
T |
A |
4: 155,725,229 (GRCm39) |
|
probably benign |
Het |
Cdkl3 |
T |
C |
11: 51,902,135 (GRCm39) |
Y115H |
probably damaging |
Het |
Cep41 |
C |
A |
6: 30,656,630 (GRCm39) |
C274F |
probably damaging |
Het |
Ces1a |
C |
A |
8: 93,768,671 (GRCm39) |
V108F |
probably benign |
Het |
Clca4b |
A |
G |
3: 144,634,020 (GRCm39) |
Y132H |
probably benign |
Het |
Col5a3 |
T |
C |
9: 20,686,781 (GRCm39) |
E1323G |
unknown |
Het |
Cttnbp2 |
A |
G |
6: 18,367,372 (GRCm39) |
*1139Q |
probably null |
Het |
Cyp2d9 |
T |
A |
15: 82,339,991 (GRCm39) |
I127N |
probably damaging |
Het |
Dennd1b |
A |
G |
1: 139,008,957 (GRCm39) |
Y220C |
probably damaging |
Het |
Desi2 |
T |
C |
1: 178,076,918 (GRCm39) |
S141P |
possibly damaging |
Het |
Dgcr2 |
A |
G |
16: 17,661,872 (GRCm39) |
S453P |
probably damaging |
Het |
Dnah3 |
A |
G |
7: 119,620,138 (GRCm39) |
L1586P |
probably damaging |
Het |
Dpep3 |
T |
C |
8: 106,705,363 (GRCm39) |
D129G |
possibly damaging |
Het |
Eci3 |
C |
T |
13: 35,132,126 (GRCm39) |
V241I |
possibly damaging |
Het |
Ecm2 |
A |
T |
13: 49,674,559 (GRCm39) |
|
probably benign |
Het |
Emilin3 |
A |
G |
2: 160,750,096 (GRCm39) |
L551P |
probably damaging |
Het |
Erap1 |
A |
C |
13: 74,823,933 (GRCm39) |
|
probably benign |
Het |
Ern1 |
T |
C |
11: 106,289,519 (GRCm39) |
D928G |
probably benign |
Het |
Fancc |
C |
A |
13: 63,465,292 (GRCm39) |
A472S |
probably damaging |
Het |
Fkbp7 |
A |
T |
2: 76,503,188 (GRCm39) |
D57E |
probably damaging |
Het |
Gabbr2 |
T |
A |
4: 46,681,223 (GRCm39) |
I703F |
possibly damaging |
Het |
Gabrg3 |
A |
T |
7: 56,374,343 (GRCm39) |
C408S |
probably damaging |
Het |
Gm8674 |
T |
C |
13: 50,053,751 (GRCm39) |
|
noncoding transcript |
Het |
Gnas |
G |
A |
2: 174,139,928 (GRCm39) |
|
probably benign |
Het |
Grhl3 |
A |
G |
4: 135,279,992 (GRCm39) |
V354A |
probably benign |
Het |
Gsdme |
G |
T |
6: 50,206,259 (GRCm39) |
|
probably benign |
Het |
H2-D1 |
A |
G |
17: 35,484,898 (GRCm39) |
E253G |
probably damaging |
Het |
Habp2 |
A |
G |
19: 56,302,478 (GRCm39) |
T31A |
probably damaging |
Het |
Ifrd1 |
A |
G |
12: 40,256,986 (GRCm39) |
|
probably null |
Het |
Il20 |
A |
G |
1: 130,837,476 (GRCm39) |
|
probably benign |
Het |
Isx |
A |
T |
8: 75,619,328 (GRCm39) |
I160F |
possibly damaging |
Het |
Itgb2l |
T |
G |
16: 96,224,111 (GRCm39) |
|
probably benign |
Het |
Kcnv1 |
T |
G |
15: 44,976,277 (GRCm39) |
|
probably benign |
Het |
Kif17 |
T |
C |
4: 138,015,798 (GRCm39) |
|
probably null |
Het |
Kirrel3 |
A |
C |
9: 34,946,470 (GRCm39) |
D743A |
probably damaging |
Het |
Lmod3 |
T |
C |
6: 97,225,032 (GRCm39) |
D263G |
probably damaging |
Het |
Manf |
A |
G |
9: 106,766,385 (GRCm39) |
L132P |
probably damaging |
Het |
Mark2 |
C |
T |
19: 7,259,325 (GRCm39) |
|
probably null |
Het |
Med10 |
G |
A |
13: 69,963,720 (GRCm39) |
S107N |
possibly damaging |
Het |
Med31 |
A |
G |
11: 72,104,601 (GRCm39) |
|
probably null |
Het |
Mki67 |
C |
A |
7: 135,309,987 (GRCm39) |
A155S |
probably benign |
Het |
Mprip |
T |
A |
11: 59,660,798 (GRCm39) |
L2193Q |
probably damaging |
Het |
Mylk |
A |
G |
16: 34,820,799 (GRCm39) |
N126S |
probably damaging |
Het |
Myo16 |
A |
G |
8: 10,489,689 (GRCm39) |
I715V |
probably benign |
Het |
Myo18b |
T |
C |
5: 112,946,700 (GRCm39) |
T1591A |
probably benign |
Het |
Myt1 |
T |
A |
2: 181,437,482 (GRCm39) |
D64E |
probably benign |
Het |
Ndufa10 |
A |
T |
1: 92,397,618 (GRCm39) |
Y61N |
probably damaging |
Het |
Nob1 |
A |
G |
8: 108,142,856 (GRCm39) |
F275S |
probably damaging |
Het |
Nop2 |
T |
C |
6: 125,116,667 (GRCm39) |
V333A |
possibly damaging |
Het |
Ogdh |
T |
A |
11: 6,297,216 (GRCm39) |
V545D |
possibly damaging |
Het |
Or1l4b |
T |
G |
2: 37,036,342 (GRCm39) |
N39K |
probably damaging |
Het |
Or4p21 |
A |
G |
2: 88,276,563 (GRCm39) |
S240P |
probably damaging |
Het |
Or5b107 |
A |
G |
19: 13,142,614 (GRCm39) |
T79A |
probably benign |
Het |
Or5t16 |
T |
C |
2: 86,819,358 (GRCm39) |
N54S |
probably benign |
Het |
Or6d13 |
T |
A |
6: 116,517,949 (GRCm39) |
N178K |
possibly damaging |
Het |
Or6n2 |
G |
T |
1: 173,897,643 (GRCm39) |
V260F |
probably damaging |
Het |
Or9k2b |
A |
G |
10: 130,016,557 (GRCm39) |
F64S |
probably damaging |
Het |
Pcdhb1 |
T |
C |
18: 37,398,774 (GRCm39) |
F242L |
probably damaging |
Het |
Pkd2l2 |
A |
G |
18: 34,558,155 (GRCm39) |
Y278C |
probably damaging |
Het |
Plxdc1 |
T |
A |
11: 97,823,030 (GRCm39) |
|
probably null |
Het |
Ppp2r5b |
A |
G |
19: 6,282,664 (GRCm39) |
|
probably benign |
Het |
Pramel31 |
C |
A |
4: 144,089,416 (GRCm39) |
L245I |
probably benign |
Het |
Prelid2 |
T |
A |
18: 42,070,717 (GRCm39) |
T39S |
possibly damaging |
Het |
Prkd1 |
A |
T |
12: 50,536,824 (GRCm39) |
F87I |
probably benign |
Het |
Prl3d3 |
C |
T |
13: 27,340,830 (GRCm39) |
T4I |
probably damaging |
Het |
Proser3 |
T |
A |
7: 30,240,208 (GRCm39) |
T299S |
probably benign |
Het |
Ptprc |
G |
T |
1: 137,996,058 (GRCm39) |
H1095N |
probably damaging |
Het |
Rab11fip5 |
G |
T |
6: 85,325,033 (GRCm39) |
P425T |
probably benign |
Het |
Rac2 |
T |
C |
15: 78,449,168 (GRCm39) |
T115A |
probably damaging |
Het |
Rtl9 |
C |
A |
X: 141,884,271 (GRCm39) |
T561K |
possibly damaging |
Het |
Runx2 |
T |
C |
17: 44,969,392 (GRCm39) |
|
probably benign |
Het |
Rxfp1 |
C |
T |
3: 79,555,518 (GRCm39) |
V613I |
probably benign |
Het |
Scn9a |
T |
C |
2: 66,367,721 (GRCm39) |
K656R |
probably benign |
Het |
Sec31b |
A |
G |
19: 44,514,046 (GRCm39) |
S406P |
probably benign |
Het |
Septin5 |
T |
C |
16: 18,444,115 (GRCm39) |
D44G |
possibly damaging |
Het |
Slc17a3 |
C |
T |
13: 24,039,841 (GRCm39) |
S293F |
probably damaging |
Het |
Slc35c2 |
T |
C |
2: 165,124,056 (GRCm39) |
T94A |
possibly damaging |
Het |
Slc8a3 |
T |
A |
12: 81,361,616 (GRCm39) |
D401V |
probably damaging |
Het |
Slitrk1 |
A |
T |
14: 109,149,671 (GRCm39) |
C347S |
probably damaging |
Het |
Smg1 |
G |
T |
7: 117,767,084 (GRCm39) |
|
probably benign |
Het |
Snx14 |
T |
C |
9: 88,276,483 (GRCm39) |
K610E |
probably benign |
Het |
Spata31e2 |
A |
G |
1: 26,724,970 (GRCm39) |
M70T |
probably benign |
Het |
Sppl2a |
A |
G |
2: 126,762,337 (GRCm39) |
|
probably benign |
Het |
Stk-ps2 |
T |
A |
1: 46,068,851 (GRCm39) |
|
noncoding transcript |
Het |
Sult3a1 |
T |
C |
10: 33,740,010 (GRCm39) |
M23T |
probably benign |
Het |
Syt5 |
A |
G |
7: 4,548,682 (GRCm39) |
L50P |
possibly damaging |
Het |
Tacr1 |
A |
G |
6: 82,532,012 (GRCm39) |
I303V |
possibly damaging |
Het |
Vcp |
A |
G |
4: 42,983,011 (GRCm39) |
S612P |
possibly damaging |
Het |
Vmn1r47 |
A |
G |
6: 89,999,788 (GRCm39) |
I307V |
probably null |
Het |
Vmn1r83 |
T |
G |
7: 12,055,919 (GRCm39) |
D46A |
probably damaging |
Het |
Vmn2r118 |
G |
T |
17: 55,917,772 (GRCm39) |
Q247K |
probably benign |
Het |
Vmn2r94 |
C |
T |
17: 18,477,427 (GRCm39) |
C328Y |
probably damaging |
Het |
Vps13b |
T |
A |
15: 35,372,145 (GRCm39) |
Y13* |
probably null |
Het |
Vps13d |
C |
T |
4: 144,813,754 (GRCm39) |
R3241H |
probably damaging |
Het |
Wdr5b |
A |
G |
16: 35,862,840 (GRCm39) |
T320A |
probably benign |
Het |
Zfhx2 |
A |
T |
14: 55,302,784 (GRCm39) |
D1733E |
probably benign |
Het |
Zfp541 |
A |
G |
7: 15,829,607 (GRCm39) |
|
probably benign |
Het |
Zfp708 |
A |
T |
13: 67,218,781 (GRCm39) |
Y314* |
probably null |
Het |
|
Other mutations in Trip12 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00331:Trip12
|
APN |
1 |
84,708,262 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00430:Trip12
|
APN |
1 |
84,741,582 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL00465:Trip12
|
APN |
1 |
84,741,582 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL00819:Trip12
|
APN |
1 |
84,731,993 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00900:Trip12
|
APN |
1 |
84,702,485 (GRCm39) |
missense |
possibly damaging |
0.56 |
IGL00990:Trip12
|
APN |
1 |
84,729,605 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01087:Trip12
|
APN |
1 |
84,735,580 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01400:Trip12
|
APN |
1 |
84,729,699 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01521:Trip12
|
APN |
1 |
84,743,919 (GRCm39) |
splice site |
probably benign |
|
IGL01619:Trip12
|
APN |
1 |
84,792,631 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01796:Trip12
|
APN |
1 |
84,705,999 (GRCm39) |
missense |
probably benign |
0.42 |
IGL01975:Trip12
|
APN |
1 |
84,792,534 (GRCm39) |
splice site |
probably benign |
|
IGL02190:Trip12
|
APN |
1 |
84,743,791 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02474:Trip12
|
APN |
1 |
84,771,854 (GRCm39) |
missense |
probably benign |
|
IGL02517:Trip12
|
APN |
1 |
84,721,535 (GRCm39) |
unclassified |
probably benign |
|
IGL02631:Trip12
|
APN |
1 |
84,743,729 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02991:Trip12
|
APN |
1 |
84,716,536 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03161:Trip12
|
APN |
1 |
84,738,853 (GRCm39) |
unclassified |
probably benign |
|
IGL03388:Trip12
|
APN |
1 |
84,720,907 (GRCm39) |
missense |
probably damaging |
0.99 |
cardamom
|
UTSW |
1 |
84,726,997 (GRCm39) |
missense |
probably damaging |
0.99 |
pungent
|
UTSW |
1 |
84,771,636 (GRCm39) |
missense |
possibly damaging |
0.70 |
spices
|
UTSW |
1 |
84,771,596 (GRCm39) |
missense |
probably benign |
0.10 |
sulfuric
|
UTSW |
1 |
84,736,771 (GRCm39) |
missense |
probably benign |
0.19 |
Turmeric
|
UTSW |
1 |
84,732,064 (GRCm39) |
missense |
probably benign |
0.07 |
LCD18:Trip12
|
UTSW |
1 |
84,754,482 (GRCm38) |
unclassified |
probably benign |
|
R0090:Trip12
|
UTSW |
1 |
84,709,857 (GRCm39) |
splice site |
probably benign |
|
R0111:Trip12
|
UTSW |
1 |
84,736,854 (GRCm39) |
unclassified |
probably benign |
|
R0471:Trip12
|
UTSW |
1 |
84,703,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R0486:Trip12
|
UTSW |
1 |
84,738,805 (GRCm39) |
nonsense |
probably null |
|
R0557:Trip12
|
UTSW |
1 |
84,702,468 (GRCm39) |
missense |
probably damaging |
1.00 |
R0570:Trip12
|
UTSW |
1 |
84,729,269 (GRCm39) |
missense |
probably damaging |
1.00 |
R0614:Trip12
|
UTSW |
1 |
84,735,482 (GRCm39) |
missense |
probably damaging |
1.00 |
R0630:Trip12
|
UTSW |
1 |
84,771,636 (GRCm39) |
missense |
possibly damaging |
0.70 |
R0657:Trip12
|
UTSW |
1 |
84,736,771 (GRCm39) |
missense |
probably benign |
0.19 |
R0741:Trip12
|
UTSW |
1 |
84,722,902 (GRCm39) |
missense |
probably benign |
0.09 |
R0862:Trip12
|
UTSW |
1 |
84,721,730 (GRCm39) |
missense |
probably damaging |
0.99 |
R0864:Trip12
|
UTSW |
1 |
84,721,730 (GRCm39) |
missense |
probably damaging |
0.99 |
R1124:Trip12
|
UTSW |
1 |
84,714,758 (GRCm39) |
missense |
probably damaging |
1.00 |
R1252:Trip12
|
UTSW |
1 |
84,754,071 (GRCm39) |
nonsense |
probably null |
|
R1455:Trip12
|
UTSW |
1 |
84,736,821 (GRCm39) |
missense |
probably benign |
0.01 |
R1487:Trip12
|
UTSW |
1 |
84,746,352 (GRCm39) |
missense |
probably damaging |
1.00 |
R1702:Trip12
|
UTSW |
1 |
84,722,784 (GRCm39) |
missense |
probably damaging |
1.00 |
R1781:Trip12
|
UTSW |
1 |
84,708,342 (GRCm39) |
missense |
probably benign |
0.01 |
R1847:Trip12
|
UTSW |
1 |
84,726,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R1854:Trip12
|
UTSW |
1 |
84,705,866 (GRCm39) |
missense |
probably damaging |
1.00 |
R1866:Trip12
|
UTSW |
1 |
84,722,781 (GRCm39) |
missense |
probably damaging |
1.00 |
R1926:Trip12
|
UTSW |
1 |
84,727,012 (GRCm39) |
missense |
probably damaging |
0.98 |
R1935:Trip12
|
UTSW |
1 |
84,771,822 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1950:Trip12
|
UTSW |
1 |
84,738,522 (GRCm39) |
missense |
probably damaging |
1.00 |
R1994:Trip12
|
UTSW |
1 |
84,726,893 (GRCm39) |
missense |
probably damaging |
1.00 |
R2014:Trip12
|
UTSW |
1 |
84,738,587 (GRCm39) |
nonsense |
probably null |
|
R2391:Trip12
|
UTSW |
1 |
84,792,511 (GRCm39) |
frame shift |
probably null |
|
R2423:Trip12
|
UTSW |
1 |
84,792,511 (GRCm39) |
frame shift |
probably null |
|
R2433:Trip12
|
UTSW |
1 |
84,721,544 (GRCm39) |
missense |
possibly damaging |
0.84 |
R2905:Trip12
|
UTSW |
1 |
84,732,064 (GRCm39) |
missense |
probably benign |
0.07 |
R3040:Trip12
|
UTSW |
1 |
84,719,966 (GRCm39) |
missense |
probably benign |
0.13 |
R3735:Trip12
|
UTSW |
1 |
84,792,511 (GRCm39) |
frame shift |
probably null |
|
R3907:Trip12
|
UTSW |
1 |
84,709,827 (GRCm39) |
missense |
possibly damaging |
0.53 |
R4394:Trip12
|
UTSW |
1 |
84,703,462 (GRCm39) |
missense |
probably damaging |
1.00 |
R4540:Trip12
|
UTSW |
1 |
84,726,997 (GRCm39) |
missense |
probably damaging |
0.99 |
R4859:Trip12
|
UTSW |
1 |
84,771,531 (GRCm39) |
missense |
probably damaging |
0.99 |
R5240:Trip12
|
UTSW |
1 |
84,771,854 (GRCm39) |
missense |
probably benign |
|
R5278:Trip12
|
UTSW |
1 |
84,739,868 (GRCm39) |
missense |
probably damaging |
1.00 |
R5377:Trip12
|
UTSW |
1 |
84,735,152 (GRCm39) |
missense |
probably damaging |
1.00 |
R5510:Trip12
|
UTSW |
1 |
84,746,401 (GRCm39) |
missense |
probably damaging |
1.00 |
R5542:Trip12
|
UTSW |
1 |
84,727,065 (GRCm39) |
missense |
probably damaging |
1.00 |
R5550:Trip12
|
UTSW |
1 |
84,738,820 (GRCm39) |
missense |
probably damaging |
0.99 |
R5886:Trip12
|
UTSW |
1 |
84,708,179 (GRCm39) |
intron |
probably benign |
|
R5893:Trip12
|
UTSW |
1 |
84,736,884 (GRCm39) |
unclassified |
probably benign |
|
R5914:Trip12
|
UTSW |
1 |
84,741,179 (GRCm39) |
missense |
probably damaging |
1.00 |
R5925:Trip12
|
UTSW |
1 |
84,726,974 (GRCm39) |
nonsense |
probably null |
|
R5985:Trip12
|
UTSW |
1 |
84,703,492 (GRCm39) |
missense |
probably damaging |
0.99 |
R6135:Trip12
|
UTSW |
1 |
84,738,559 (GRCm39) |
missense |
probably benign |
0.00 |
R6158:Trip12
|
UTSW |
1 |
84,738,733 (GRCm39) |
missense |
possibly damaging |
0.84 |
R6419:Trip12
|
UTSW |
1 |
84,771,591 (GRCm39) |
missense |
probably damaging |
1.00 |
R6816:Trip12
|
UTSW |
1 |
84,771,435 (GRCm39) |
missense |
probably damaging |
0.99 |
R7144:Trip12
|
UTSW |
1 |
84,771,435 (GRCm39) |
missense |
probably damaging |
0.99 |
R7194:Trip12
|
UTSW |
1 |
84,771,943 (GRCm39) |
missense |
probably benign |
0.07 |
R7355:Trip12
|
UTSW |
1 |
84,792,604 (GRCm39) |
missense |
probably damaging |
1.00 |
R7361:Trip12
|
UTSW |
1 |
84,728,163 (GRCm39) |
missense |
probably damaging |
0.98 |
R7588:Trip12
|
UTSW |
1 |
84,738,604 (GRCm39) |
missense |
probably damaging |
0.99 |
R7705:Trip12
|
UTSW |
1 |
84,755,170 (GRCm39) |
missense |
probably damaging |
1.00 |
R7818:Trip12
|
UTSW |
1 |
84,738,527 (GRCm39) |
missense |
probably damaging |
1.00 |
R7918:Trip12
|
UTSW |
1 |
84,722,784 (GRCm39) |
missense |
probably damaging |
0.98 |
R8127:Trip12
|
UTSW |
1 |
84,716,463 (GRCm39) |
missense |
probably damaging |
0.99 |
R8221:Trip12
|
UTSW |
1 |
84,743,771 (GRCm39) |
missense |
possibly damaging |
0.80 |
R8336:Trip12
|
UTSW |
1 |
84,743,762 (GRCm39) |
missense |
probably benign |
0.37 |
R8373:Trip12
|
UTSW |
1 |
84,773,488 (GRCm39) |
missense |
probably damaging |
0.98 |
R8719:Trip12
|
UTSW |
1 |
84,722,790 (GRCm39) |
missense |
probably damaging |
0.98 |
R8771:Trip12
|
UTSW |
1 |
84,721,018 (GRCm39) |
unclassified |
probably benign |
|
R8997:Trip12
|
UTSW |
1 |
84,771,596 (GRCm39) |
missense |
probably benign |
0.10 |
R9146:Trip12
|
UTSW |
1 |
84,771,881 (GRCm39) |
missense |
possibly damaging |
0.89 |
R9236:Trip12
|
UTSW |
1 |
84,703,550 (GRCm39) |
missense |
probably damaging |
1.00 |
R9338:Trip12
|
UTSW |
1 |
84,727,019 (GRCm39) |
missense |
probably damaging |
0.99 |
R9391:Trip12
|
UTSW |
1 |
84,773,473 (GRCm39) |
missense |
probably benign |
0.00 |
R9516:Trip12
|
UTSW |
1 |
84,735,215 (GRCm39) |
missense |
probably damaging |
1.00 |
X0023:Trip12
|
UTSW |
1 |
84,738,508 (GRCm39) |
missense |
probably benign |
0.12 |
X0065:Trip12
|
UTSW |
1 |
84,726,884 (GRCm39) |
missense |
probably benign |
0.21 |
Z1088:Trip12
|
UTSW |
1 |
84,743,889 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGAGGCCATCTCATGTACTTCCTTAACT -3'
(R):5'- TCTTTTCTCTTGAAGGTTCTAAGGCCCA -3'
Sequencing Primer
(F):5'- TCAAAGCATCACTAATGGGCTG -3'
(R):5'- AGCAGCTTCTTCAAGGACTAC -3'
|
Posted On |
2013-07-11 |