Mutagenetix > Incidental Mutation

Incidental Mutation 'R7427:Bpifb5'

576155

Institutional Source

Beutler Lab

Gene Symbol

Bpifb5

Ensembl Gene

ENSMUSG00000038572

Gene Name

BPI fold containing family B, member 5

Synonyms

BC018465

MMRRC Submission

045505-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7427 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

154065662-154082822 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 154067042 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Isoleucine at position 98 (M98I)

Ref Sequence

ENSEMBL: ENSMUSP00000046683 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000028987] [ENSMUST00000045959] [ENSMUST00000081816]

AlphaFold

Q3UQ05

Predicted Effect

probably benign
Transcript: ENSMUST00000028987

SMART Domains

Protein: ENSMUSP00000028987
Gene: ENSMUSG00000027485

Domain	Start	End	E-Value	Type
signal peptide	1	21	N/A	INTRINSIC
BPI1	36	256	3.3e-40	SMART
Pfam:LBP_BPI_CETP_C	331	470	1.6e-8	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000045959
AA Change: M98I

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000046683
Gene: ENSMUSG00000038572
AA Change: M98I

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
coiled coil region	26	54	N/A	INTRINSIC
Pfam:LBP_BPI_CETP	94	231	7.6e-14	PFAM
Blast:BPI2	291	488	4e-91	BLAST
SCOP:d1ewfa2	433	486	8e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000081816

SMART Domains

Protein: ENSMUSP00000080501
Gene: ENSMUSG00000027485

Domain	Start	End	E-Value	Type
signal peptide	1	21	N/A	INTRINSIC
BPI1	36	256	3.3e-40	SMART
Pfam:LBP_BPI_CETP_C	331	470	1.6e-8	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.4%

Validation Efficiency

100% (78/78)

Allele List at MGI

All alleles(1) : Targeted, other(1)

Other mutations in this stock

Total: 78 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adck5	T	A	15: 76,478,585 (GRCm39)	C318S	possibly damaging	Het
Aspm	T	A	1: 139,385,354 (GRCm39)	C333S	probably benign	Het
B3gnt4	A	G	5: 123,648,794 (GRCm39)	N53S	probably damaging	Het
Cacna2d3	A	G	14: 28,786,232 (GRCm39)	M585T	probably damaging	Het
Cbarp	T	C	10: 79,967,138 (GRCm39)	D701G	probably damaging	Het
Ccn2	T	G	10: 24,473,397 (GRCm39)	M312R	probably damaging	Het
Cntrl	T	A	2: 35,060,546 (GRCm39)	W1913R	probably benign	Het
Cry2	T	C	2: 92,243,392 (GRCm39)	D483G	possibly damaging	Het
Csmd1	A	G	8: 16,073,864 (GRCm39)	F2044L	possibly damaging	Het
Cxcl16	A	G	11: 70,349,630 (GRCm39)	V78A	possibly damaging	Het
Cxcr6	A	T	9: 123,639,305 (GRCm39)	Y109F	probably benign	Het
Cyb5b	A	G	8: 107,897,048 (GRCm39)	D106G	probably benign	Het
D630036H23Rik	T	C	12: 36,431,537 (GRCm39)	R154G	unknown	Het
Dnah9	T	C	11: 65,846,045 (GRCm39)	T2998A	probably benign	Het
Focad	T	C	4: 88,286,988 (GRCm39)	S1254P	unknown	Het
Gm21886	A	T	18: 80,132,867 (GRCm39)	L97Q	probably damaging	Het
Gpr158	A	C	2: 21,832,129 (GRCm39)	L1076F	probably benign	Het
Hivep2	T	C	10: 14,009,485 (GRCm39)	M1714T	possibly damaging	Het
Hlcs	A	G	16: 94,068,758 (GRCm39)	V154A	probably benign	Het
Hpdl	A	T	4: 116,678,062 (GRCm39)	L133Q	probably damaging	Het
Il1rn	C	A	2: 24,239,554 (GRCm39)	T150K	probably benign	Het
Il6st	A	G	13: 112,625,094 (GRCm39)	I237V	probably benign	Het
Inpp5f	A	G	7: 128,281,529 (GRCm39)	D510G	probably damaging	Het
Ism2	G	T	12: 87,333,769 (GRCm39)	T92K	possibly damaging	Het
Kif13b	T	C	14: 65,025,909 (GRCm39)	I1422T	probably benign	Het
Kit	G	A	5: 75,806,507 (GRCm39)	V671I	possibly damaging	Het
Klhdc8a	A	T	1: 132,230,705 (GRCm39)	N190I	probably damaging	Het
Lad1	C	T	1: 135,753,576 (GRCm39)	T41I	probably damaging	Het
Lrrc7	G	T	3: 157,903,778 (GRCm39)	T294K	probably benign	Het
Megf8	C	T	7: 25,037,796 (GRCm39)	R771C	probably benign	Het
Micu3	A	C	8: 40,831,955 (GRCm39)	N440T	possibly damaging	Het
Mnx1	T	C	5: 29,679,211 (GRCm39)	N291D	unknown	Het
Mthfr	A	G	4: 148,136,060 (GRCm39)	M378V	probably benign	Het
Mup2	A	T	4: 60,138,454 (GRCm39)	D79E	probably benign	Het
Myzap	T	C	9: 71,412,465 (GRCm39)	T451A	probably benign	Het
Nlrp9c	T	C	7: 26,070,860 (GRCm39)	D907G	probably benign	Het
Nr1h4	T	C	10: 89,334,267 (GRCm39)	E41G	probably benign	Het
Nup98	A	T	7: 101,784,208 (GRCm39)		probably null	Het
Nxpe5	A	C	5: 138,238,022 (GRCm39)	Y194S	probably damaging	Het
Omd	A	T	13: 49,745,745 (GRCm39)	E385V	possibly damaging	Het
Or12d15	T	C	17: 37,694,190 (GRCm39)	V244A	probably damaging	Het
Or12e9	G	T	2: 87,202,034 (GRCm39)	V53L	probably benign	Het
Or2av9	A	G	11: 58,380,606 (GRCm39)	I325T	probably benign	Het
Or52m1	A	G	7: 102,289,533 (GRCm39)	I27V	probably benign	Het
Or5m12	T	A	2: 85,734,475 (GRCm39)	R308*	probably null	Het
Or5m3	A	T	2: 85,838,563 (GRCm39)	I148L	probably benign	Het
Or9s18	A	G	13: 65,300,866 (GRCm39)	Y276C	probably damaging	Het
Pcdh9	G	T	14: 94,124,547 (GRCm39)	T541K	probably damaging	Het
Pdia6	T	C	12: 17,328,546 (GRCm39)	V167A	probably damaging	Het
Phf7	C	T	14: 30,962,370 (GRCm39)	R145Q	possibly damaging	Het
Pitx3	T	C	19: 46,125,863 (GRCm39)	D20G	possibly damaging	Het
Plxnb1	T	C	9: 108,937,236 (GRCm39)	V1139A	probably benign	Het
Pon2	A	T	6: 5,268,995 (GRCm39)	N226K	probably damaging	Het
Potegl	C	T	2: 23,147,006 (GRCm39)	R337C	probably benign	Het
Ppp1r10	T	A	17: 36,241,025 (GRCm39)	H642Q	possibly damaging	Het
Prom2	A	G	2: 127,381,731 (GRCm39)	L195P	probably damaging	Het
Psg23	C	T	7: 18,345,908 (GRCm39)		probably null	Het
Rfx4	C	A	10: 84,731,876 (GRCm39)	Q618K	probably benign	Het
Rhobtb1	T	A	10: 69,084,654 (GRCm39)	I15N	probably damaging	Het
Rhot2	A	T	17: 26,060,583 (GRCm39)	V233E	probably damaging	Het
Ripply2	T	C	9: 86,901,809 (GRCm39)	S112P	possibly damaging	Het
Slc12a1	C	A	2: 125,056,052 (GRCm39)	T861N	probably benign	Het
Slc35f1	T	A	10: 52,965,510 (GRCm39)	S308R	probably damaging	Het
Slc35f4	T	A	14: 49,536,355 (GRCm39)	I427F	probably damaging	Het
Slco1a8	T	G	6: 141,949,234 (GRCm39)		probably null	Het
Sned1	G	A	1: 93,217,080 (GRCm39)	V1322I	probably benign	Het
Sprr2f	G	A	3: 92,273,251 (GRCm39)	V17M	unknown	Het
Srd5a3	A	G	5: 76,302,490 (GRCm39)	H285R	probably benign	Het
Stab1	T	C	14: 30,881,216 (GRCm39)	T605A	probably benign	Het
Syne1	T	C	10: 5,223,718 (GRCm39)	Q3054R	probably damaging	Het
Tas1r1	T	C	4: 152,122,765 (GRCm39)	T27A	probably benign	Het
Tmem150b	A	T	7: 4,719,209 (GRCm39)	V237E	probably benign	Het
Trpv6	C	T	6: 41,602,087 (GRCm39)	M407I	probably benign	Het
Ttn	T	G	2: 76,550,698 (GRCm39)	D31528A	probably damaging	Het
Uroc1	A	T	6: 90,323,344 (GRCm39)	D354V	possibly damaging	Het
Vmn2r69	T	C	7: 85,060,467 (GRCm39)	I372M	probably benign	Het
Vmn2r93	A	T	17: 18,546,672 (GRCm39)	H848L	probably benign	Het
Zfp971	T	A	2: 177,674,967 (GRCm39)	C189S	probably damaging	Het

Other mutations in Bpifb5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01543:Bpifb5	APN	2	154,075,169 (GRCm39)	missense	possibly damaging	0.86
IGL01676:Bpifb5	APN	2	154,070,969 (GRCm39)	missense	possibly damaging	0.71
IGL02065:Bpifb5	APN	2	154,069,103 (GRCm39)	missense	probably damaging	0.98
IGL02141:Bpifb5	APN	2	154,071,477 (GRCm39)	splice site	probably null
IGL02244:Bpifb5	APN	2	154,067,068 (GRCm39)	missense	possibly damaging	0.93
IGL03118:Bpifb5	APN	2	154,078,673 (GRCm39)	splice site	probably benign
A4554:Bpifb5	UTSW	2	154,069,100 (GRCm39)	missense	possibly damaging	0.71
R0022:Bpifb5	UTSW	2	154,072,268 (GRCm39)	missense	probably damaging	0.98
R0492:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0654:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0692:Bpifb5	UTSW	2	154,076,616 (GRCm39)	missense	probably benign	0.33
R0707:Bpifb5	UTSW	2	154,070,820 (GRCm39)	missense	probably benign	0.11
R0898:Bpifb5	UTSW	2	154,075,254 (GRCm39)	missense	probably benign
R1534:Bpifb5	UTSW	2	154,071,419 (GRCm39)	missense	possibly damaging	0.86
R1539:Bpifb5	UTSW	2	154,065,776 (GRCm39)	missense	probably benign
R1874:Bpifb5	UTSW	2	154,069,122 (GRCm39)	splice site	probably benign
R1971:Bpifb5	UTSW	2	154,072,264 (GRCm39)	missense	probably benign	0.18
R2001:Bpifb5	UTSW	2	154,075,199 (GRCm39)	missense	possibly damaging	0.53
R3013:Bpifb5	UTSW	2	154,070,775 (GRCm39)	missense	possibly damaging	0.59
R3916:Bpifb5	UTSW	2	154,070,101 (GRCm39)	missense	probably benign
R4499:Bpifb5	UTSW	2	154,082,678 (GRCm39)	missense	possibly damaging	0.53
R5250:Bpifb5	UTSW	2	154,066,881 (GRCm39)	missense	probably benign
R6301:Bpifb5	UTSW	2	154,072,139 (GRCm39)	missense	possibly damaging	0.73
R6836:Bpifb5	UTSW	2	154,069,985 (GRCm39)	missense	probably benign	0.02
R6869:Bpifb5	UTSW	2	154,075,143 (GRCm39)	missense	probably benign	0.33
R7014:Bpifb5	UTSW	2	154,066,876 (GRCm39)	nonsense	probably null
R7300:Bpifb5	UTSW	2	154,070,066 (GRCm39)	missense	possibly damaging	0.85
R7428:Bpifb5	UTSW	2	154,067,042 (GRCm39)	missense	probably benign
R7439:Bpifb5	UTSW	2	154,070,853 (GRCm39)	missense	possibly damaging	0.71
R7448:Bpifb5	UTSW	2	154,072,105 (GRCm39)	missense	possibly damaging	0.53
R7935:Bpifb5	UTSW	2	154,070,975 (GRCm39)	missense	probably benign	0.01
R8964:Bpifb5	UTSW	2	154,072,198 (GRCm39)	missense	possibly damaging	0.96
R9049:Bpifb5	UTSW	2	154,070,096 (GRCm39)	missense	probably benign	0.00
R9058:Bpifb5	UTSW	2	154,080,817 (GRCm39)	missense	possibly damaging	0.85
R9349:Bpifb5	UTSW	2	154,067,005 (GRCm39)	missense	possibly damaging	0.96
T0975:Bpifb5	UTSW	2	154,071,384 (GRCm39)	splice site	probably null

Predicted Primers

PCR Primer
(F):5'- AATGGCTGAATGGACCCTGAG -3'
(R):5'- TAGCCACACAGTAGGAGGAC -3'

Sequencing Primer
(F):5'- TCCCCAGACATCTCAAATCTATTATC -3'
(R):5'- AGGAGGACCTGCTTCGTG -3'

Posted On

2019-10-07