Incidental Mutation 'R0629:Fuca1'
ID 57745
Institutional Source Beutler Lab
Gene Symbol Fuca1
Ensembl Gene ENSMUSG00000028673
Gene Name fucosidase, alpha-L- 1, tissue
Synonyms 0610006A03Rik, Afuc, 9530055J05Rik
MMRRC Submission 038818-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R0629 (G1)
Quality Score 201
Status Validated
Chromosome 4
Chromosomal Location 135920735-135940311 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 135925644 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 193 (V193A)
Ref Sequence ENSEMBL: ENSMUSP00000030434 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000030434]
AlphaFold Q99LJ1
Predicted Effect possibly damaging
Transcript: ENSMUST00000030434
AA Change: V193A

PolyPhen 2 Score 0.559 (Sensitivity: 0.88; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000030434
Gene: ENSMUSG00000028673
AA Change: V193A

low complexity region 2 19 N/A INTRINSIC
Alpha_L_fucos 22 399 7.97e-234 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153592
Meta Mutation Damage Score 0.4418 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.9%
  • 10x: 97.6%
  • 20x: 95.6%
Validation Efficiency 100% (66/66)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a lysosomal enzyme involved in the degradation of fucose-containing glycoproteins and glycolipids. Mutations in this gene are associated with fucosidosis (FUCA1D), which is an autosomal recessive lysosomal storage disease. A pseudogene of this locus is present on chr 2.[provided by RefSeq, Oct 2009]
PHENOTYPE: Strain differences are probably due to a structural variant in Fuca1. Strains A/J, BDP, LP, P, SEA/Gn and 129/J have high FUCA activity and high heat stability; C57BL/6, C3H/He, DBA/2, BALB/c and 22 other strains have low activity and low heat stability. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aars2 A T 17: 45,507,547 (GRCm38) D86V probably damaging Het
Adamts14 G A 10: 61,211,624 (GRCm38) Q733* probably null Het
Adcy10 A G 1: 165,543,105 (GRCm38) D651G probably damaging Het
Apcdd1 T A 18: 62,933,970 (GRCm38) C52S probably damaging Het
Bclaf1 T C 10: 20,333,426 (GRCm38) S463P probably damaging Het
Cabcoco1 T C 10: 68,516,278 (GRCm38) Y68C probably damaging Het
Cacna1f G A X: 7,620,434 (GRCm38) S888N probably damaging Het
Cacna1g A G 11: 94,409,543 (GRCm38) C2134R possibly damaging Het
Cdc37 A C 9: 21,140,768 (GRCm38) M325R possibly damaging Het
Clca2 T A 3: 145,072,239 (GRCm38) M762L probably benign Het
Cntn3 C T 6: 102,203,976 (GRCm38) V753M probably damaging Het
Col6a6 A T 9: 105,727,165 (GRCm38) probably benign Het
Dscaml1 A G 9: 45,721,418 (GRCm38) D1194G probably damaging Het
Egfr G A 11: 16,869,333 (GRCm38) G288S probably damaging Het
Fbxl17 G T 17: 63,471,414 (GRCm38) N19K probably damaging Het
Fmo3 A G 1: 162,958,227 (GRCm38) probably benign Het
Frmd6 T C 12: 70,883,762 (GRCm38) Y219H probably damaging Het
Gm1141 G C X: 71,938,773 (GRCm38) R296P possibly damaging Het
Gm7461 C T 8: 4,677,769 (GRCm38) noncoding transcript Het
Gpc5 T A 14: 115,552,239 (GRCm38) N508K possibly damaging Het
Iqch A T 9: 63,425,382 (GRCm38) D1019E probably benign Het
Isyna1 A G 8: 70,594,708 (GRCm38) Y27C probably damaging Het
Itgb8 T G 12: 119,202,481 (GRCm38) H105P probably benign Het
Kbtbd11 C T 8: 15,027,572 (GRCm38) P57L probably benign Het
Kcns3 A C 12: 11,092,558 (GRCm38) C47G probably damaging Het
Kif21b A T 1: 136,172,157 (GRCm38) probably null Het
Lama3 A T 18: 12,419,245 (GRCm38) H418L possibly damaging Het
Lrit3 A G 3: 129,788,302 (GRCm38) Y679H probably damaging Het
Lrrc19 T A 4: 94,638,252 (GRCm38) D356V probably damaging Het
Morc2b A G 17: 33,135,807 (GRCm38) M997T probably benign Het
Mroh9 T C 1: 163,060,636 (GRCm38) H290R possibly damaging Het
Mtcl1 A T 17: 66,338,142 (GRCm38) S1886T possibly damaging Het
Muc20 T C 16: 32,793,421 (GRCm38) T529A possibly damaging Het
Myo7a A C 7: 98,085,466 (GRCm38) L607R probably damaging Het
Myom2 T A 8: 15,069,783 (GRCm38) F180I probably damaging Het
Myt1l G A 12: 29,811,485 (GRCm38) E89K unknown Het
Nek2 A G 1: 191,831,317 (GRCm38) N431S probably benign Het
Olfr1086 T A 2: 86,676,529 (GRCm38) H268L possibly damaging Het
Olfr169 A T 16: 19,565,980 (GRCm38) V301E possibly damaging Het
Oprm1 A T 10: 6,832,604 (GRCm38) probably null Het
Oxsr1 A G 9: 119,241,784 (GRCm38) probably benign Het
Pdgfrb G A 18: 61,078,648 (GRCm38) probably null Het
Proser1 C A 3: 53,479,064 (GRCm38) P789Q probably benign Het
Ptgs2 A G 1: 150,101,037 (GRCm38) Q7R probably benign Het
Rab3d A G 9: 21,914,686 (GRCm38) V144A probably benign Het
Ralgapb T A 2: 158,439,547 (GRCm38) L167H probably damaging Het
Ranbp3 A G 17: 56,708,200 (GRCm38) T301A possibly damaging Het
Rasgrf1 G A 9: 89,984,269 (GRCm38) V587M probably damaging Het
Sec16b A G 1: 157,564,863 (GRCm38) probably benign Het
Sin3b T C 8: 72,753,536 (GRCm38) probably benign Het
Slc10a2 T C 8: 5,098,562 (GRCm38) S128G probably benign Het
Tbl1xr1 G A 3: 22,210,401 (GRCm38) V507I probably benign Het
Tmem8b T G 4: 43,669,896 (GRCm38) probably null Het
Trak1 A T 9: 121,367,167 (GRCm38) T22S probably benign Het
Trim30d A G 7: 104,487,655 (GRCm38) I114T probably damaging Het
Ttc13 A T 8: 124,674,366 (GRCm38) S624T probably damaging Het
Ttn T C 2: 76,828,130 (GRCm38) probably benign Het
Vipr1 T A 9: 121,660,171 (GRCm38) Y99* probably null Het
Vmn1r210 T C 13: 22,827,874 (GRCm38) K81E probably damaging Het
Wwc1 T C 11: 35,853,472 (GRCm38) Y841C probably benign Het
Xrcc4 A G 13: 90,000,905 (GRCm38) probably benign Het
Zdhhc22 A T 12: 86,988,297 (GRCm38) I127N probably damaging Het
Zdhhc7 A G 8: 120,088,046 (GRCm38) L8P possibly damaging Het
Zfp664 C A 5: 124,885,595 (GRCm38) L18I probably damaging Het
Other mutations in Fuca1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01627:Fuca1 APN 4 135,925,551 (GRCm38) missense possibly damaging 0.87
IGL01767:Fuca1 APN 4 135,939,201 (GRCm38) missense probably benign 0.02
IGL01949:Fuca1 APN 4 135,923,109 (GRCm38) unclassified probably benign
IGL02220:Fuca1 APN 4 135,939,219 (GRCm38) utr 3 prime probably benign
IGL02457:Fuca1 APN 4 135,934,762 (GRCm38) missense probably benign 0.00
Bereitzt UTSW 4 135,934,803 (GRCm38) nonsense probably null
decoration UTSW 4 135,929,921 (GRCm38) missense probably damaging 1.00
R2899:Fuca1 UTSW 4 135,923,012 (GRCm38) nonsense probably null
R5025:Fuca1 UTSW 4 135,932,926 (GRCm38) missense probably damaging 0.98
R5298:Fuca1 UTSW 4 135,936,926 (GRCm38) nonsense probably null
R5416:Fuca1 UTSW 4 135,922,980 (GRCm38) missense probably damaging 1.00
R5742:Fuca1 UTSW 4 135,922,975 (GRCm38) missense probably damaging 1.00
R5821:Fuca1 UTSW 4 135,922,962 (GRCm38) splice site probably null
R6127:Fuca1 UTSW 4 135,934,811 (GRCm38) missense probably damaging 0.97
R6329:Fuca1 UTSW 4 135,934,826 (GRCm38) missense probably damaging 1.00
R6819:Fuca1 UTSW 4 135,932,956 (GRCm38) missense probably damaging 1.00
R7623:Fuca1 UTSW 4 135,933,094 (GRCm38) missense probably benign 0.15
R7654:Fuca1 UTSW 4 135,929,921 (GRCm38) missense probably damaging 1.00
R7921:Fuca1 UTSW 4 135,929,910 (GRCm38) missense probably damaging 0.98
R8084:Fuca1 UTSW 4 135,934,803 (GRCm38) nonsense probably null
R8670:Fuca1 UTSW 4 135,922,971 (GRCm38) missense possibly damaging 0.71
R8754:Fuca1 UTSW 4 135,925,578 (GRCm38) missense probably damaging 0.99
R8833:Fuca1 UTSW 4 135,920,895 (GRCm38) missense probably damaging 1.00
X0025:Fuca1 UTSW 4 135,933,064 (GRCm38) missense probably benign
Predicted Primers PCR Primer

Sequencing Primer
(F):5'- ccctccctctccccctc -3'
Posted On 2013-07-11