Incidental Mutation 'R7466:Dennd4c'
ID 578756
Institutional Source Beutler Lab
Gene Symbol Dennd4c
Ensembl Gene ENSMUSG00000038024
Gene Name DENN/MADD domain containing 4C
Synonyms 1700065A05Rik
MMRRC Submission 045540-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R7466 (G1)
Quality Score 225.009
Status Validated
Chromosome 4
Chromosomal Location 86748555-86850603 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 86774331 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glycine at position 26 (D26G)
Ref Sequence ENSEMBL: ENSMUSP00000123367 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000045512] [ENSMUST00000082026] [ENSMUST00000142837]
AlphaFold A6H8H2
Predicted Effect possibly damaging
Transcript: ENSMUST00000045512
AA Change: D26G

PolyPhen 2 Score 0.703 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000039860
Gene: ENSMUSG00000038024
AA Change: D26G

DomainStartEndE-ValueType
internal_repeat_1 43 91 2.15e-5 PROSPERO
uDENN 168 275 3.96e-24 SMART
DENN 307 491 7.16e-72 SMART
dDENN 557 631 1.85e-24 SMART
low complexity region 983 1001 N/A INTRINSIC
low complexity region 1013 1025 N/A INTRINSIC
low complexity region 1045 1052 N/A INTRINSIC
low complexity region 1102 1113 N/A INTRINSIC
low complexity region 1175 1186 N/A INTRINSIC
low complexity region 1377 1392 N/A INTRINSIC
low complexity region 1472 1486 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000082026
AA Change: D26G

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000080685
Gene: ENSMUSG00000038024
AA Change: D26G

DomainStartEndE-ValueType
internal_repeat_1 43 91 3.19e-5 PROSPERO
uDENN 168 275 3.96e-24 SMART
DENN 307 491 7.16e-72 SMART
dDENN 557 631 1.85e-24 SMART
low complexity region 983 1001 N/A INTRINSIC
low complexity region 1013 1025 N/A INTRINSIC
low complexity region 1045 1052 N/A INTRINSIC
low complexity region 1102 1113 N/A INTRINSIC
low complexity region 1175 1186 N/A INTRINSIC
low complexity region 1377 1392 N/A INTRINSIC
low complexity region 1472 1486 N/A INTRINSIC
low complexity region 1724 1739 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000142837
AA Change: D26G

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000123367
Gene: ENSMUSG00000038024
AA Change: D26G

DomainStartEndE-ValueType
internal_repeat_1 43 91 2.68e-5 PROSPERO
uDENN 168 275 3.96e-24 SMART
DENN 307 491 7.16e-72 SMART
dDENN 557 631 1.85e-24 SMART
low complexity region 934 952 N/A INTRINSIC
low complexity region 964 976 N/A INTRINSIC
low complexity region 996 1003 N/A INTRINSIC
low complexity region 1053 1064 N/A INTRINSIC
low complexity region 1126 1137 N/A INTRINSIC
low complexity region 1328 1343 N/A INTRINSIC
low complexity region 1423 1437 N/A INTRINSIC
low complexity region 1675 1690 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency 99% (83/84)
Allele List at MGI
Other mutations in this stock
Total: 83 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
AI182371 T A 2: 35,088,741 (GRCm38) K203* probably null Het
Akr1c13 T C 13: 4,192,437 (GRCm38) probably benign Het
Amer3 A G 1: 34,587,993 (GRCm38) S438G probably damaging Het
Aqp9 T A 9: 71,163,261 (GRCm38) probably null Het
Art4 G T 6: 136,854,850 (GRCm38) H98N probably damaging Het
Bdh1 T C 16: 31,447,604 (GRCm38) S70P probably benign Het
Ccdc61 A C 7: 18,891,105 (GRCm38) Y503D probably damaging Het
Cd163l1 T C 7: 140,220,706 (GRCm38) probably null Het
Cd180 A T 13: 102,704,995 (GRCm38) N183I probably damaging Het
Cd200r2 C T 16: 44,909,174 (GRCm38) A64V probably damaging Het
Ceacam9 A C 7: 16,723,855 (GRCm38) K98Q probably benign Het
Cep44 AACGC A 8: 56,540,983 (GRCm38) probably null Het
Cfap77 G T 2: 28,955,613 (GRCm38) D247E probably benign Het
Cftr T C 6: 18,227,973 (GRCm38) M388T probably benign Het
Chrnb1 G A 11: 69,784,650 (GRCm38) H493Y probably damaging Het
Ckap2 A C 8: 22,177,386 (GRCm38) M153R probably benign Het
Cnot6l A G 5: 96,131,128 (GRCm38) V77A probably benign Het
Col12a1 C T 9: 79,655,407 (GRCm38) E1798K possibly damaging Het
Cth T A 3: 157,924,885 (GRCm38) D49V probably benign Het
Ctnnb1 T C 9: 120,955,416 (GRCm38) S425P probably damaging Het
Ctnnd1 T C 2: 84,610,785 (GRCm38) N690S probably benign Het
Cyhr1 C T 15: 76,648,186 (GRCm38) D241N probably benign Het
Dlg5 G A 14: 24,245,212 (GRCm38) P80L probably damaging Het
Eef2k A G 7: 120,903,484 (GRCm38) probably null Het
Ephb2 C T 4: 136,659,065 (GRCm38) R791H probably damaging Het
Erh T C 12: 80,640,983 (GRCm38) Y22C probably benign Het
F5 C T 1: 164,193,328 (GRCm38) T1124I possibly damaging Het
Fam220a T A 5: 143,563,471 (GRCm38) C213S possibly damaging Het
Fat2 G T 11: 55,310,432 (GRCm38) N605K probably damaging Het
Ganab C A 19: 8,914,569 (GRCm38) S780* probably null Het
Gbgt1 C T 2: 28,502,207 (GRCm38) P67S probably damaging Het
Gm17190 G T 13: 96,082,779 (GRCm38) G208* probably null Het
Grhl2 A G 15: 37,291,616 (GRCm38) Y316C probably damaging Het
H2-T10 T C 17: 36,120,849 (GRCm38) T38A probably benign Het
Ins1 A G 19: 52,264,420 (GRCm38) probably benign Het
Ippk T C 13: 49,432,467 (GRCm38) probably null Het
Klc4 T A 17: 46,639,910 (GRCm38) I258F probably benign Het
Manba C A 3: 135,542,393 (GRCm38) L348I probably benign Het
Mgam A G 6: 40,744,789 (GRCm38) N347S probably benign Het
Myo18b T C 5: 112,723,892 (GRCm38) T2108A probably benign Het
Naip5 A T 13: 100,221,986 (GRCm38) L914* probably null Het
Nsa2 C T 13: 97,131,220 (GRCm38) A242T probably benign Het
Nsd2 G A 5: 33,882,147 (GRCm38) W834* probably null Het
Olfr1134 T C 2: 87,656,396 (GRCm38) N175S possibly damaging Het
Olfr1419 T A 19: 11,870,316 (GRCm38) D300V possibly damaging Het
Olfr285 T C 15: 98,313,380 (GRCm38) M57V probably damaging Het
Olfr469 A T 7: 107,822,922 (GRCm38) C182* probably null Het
Pam A T 1: 97,842,247 (GRCm38) D599E probably damaging Het
Phf20l1 A G 15: 66,636,884 (GRCm38) K864R probably damaging Het
Plcl2 A G 17: 50,608,468 (GRCm38) D835G probably damaging Het
Ppm1m C A 9: 106,196,157 (GRCm38) A329S probably damaging Het
Prep T C 10: 45,150,438 (GRCm38) V486A probably benign Het
Prkcb A T 7: 122,516,844 (GRCm38) N182I probably damaging Het
Prkcz A G 4: 155,271,602 (GRCm38) F355S probably damaging Het
Psg20 C T 7: 18,684,467 (GRCm38) S125N probably benign Het
Psmd12 A G 11: 107,492,057 (GRCm38) D234G probably benign Het
Pvrig A T 5: 138,342,008 (GRCm38) M14L probably benign Het
Rabgap1l C T 1: 160,226,484 (GRCm38) probably null Het
Rfc1 A T 5: 65,275,426 (GRCm38) C764S probably damaging Het
Ryr3 T C 2: 112,926,957 (GRCm38) D351G probably benign Het
Serpinb9g T C 13: 33,495,167 (GRCm38) F340S probably benign Het
Sirpb1c C A 3: 15,832,266 (GRCm38) L315F probably damaging Het
Slc24a1 C G 9: 64,928,404 (GRCm38) E814Q unknown Het
Slc26a11 A T 11: 119,374,502 (GRCm38) Q355L probably damaging Het
Sp100 C T 1: 85,707,239 (GRCm38) L483F possibly damaging Het
St5 A G 7: 109,525,346 (GRCm38) L1096P probably damaging Het
Ston1 T A 17: 88,635,901 (GRCm38) M245K probably benign Het
Swap70 T A 7: 110,274,772 (GRCm38) D442E probably benign Het
Syne2 T A 12: 76,046,186 (GRCm38) V450D possibly damaging Het
Tbck T A 3: 132,752,563 (GRCm38) N651K probably damaging Het
Timd4 A T 11: 46,817,758 (GRCm38) T204S probably benign Het
Tmem102 A G 11: 69,804,885 (GRCm38) L87P probably damaging Het
Tmem55a T A 4: 14,912,477 (GRCm38) Y195* probably null Het
Tmprss11e T A 5: 86,709,480 (GRCm38) T325S probably benign Het
Trpm1 G A 7: 64,240,582 (GRCm38) V978M probably damaging Het
Wdr12 A T 1: 60,094,511 (GRCm38) D19E probably benign Het
Wdr35 G A 12: 9,005,773 (GRCm38) V482I probably benign Het
Wdr63 T C 3: 146,055,618 (GRCm38) D661G probably benign Het
Zer1 T C 2: 30,101,484 (GRCm38) probably null Het
Zfp503 T C 14: 21,986,011 (GRCm38) D279G probably benign Het
Zfp870 A T 17: 32,883,762 (GRCm38) C198S possibly damaging Het
Zfyve26 C T 12: 79,287,807 (GRCm38) E146K probably benign Het
Zkscan6 T C 11: 65,828,531 (GRCm38) V459A probably damaging Het
Other mutations in Dennd4c
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01309:Dennd4c APN 4 86,805,487 (GRCm38) splice site probably benign
IGL01810:Dennd4c APN 4 86,799,551 (GRCm38) missense possibly damaging 0.94
IGL02203:Dennd4c APN 4 86,802,936 (GRCm38) missense probably benign 0.00
IGL02217:Dennd4c APN 4 86,813,799 (GRCm38) missense probably benign
IGL02236:Dennd4c APN 4 86,807,435 (GRCm38) missense possibly damaging 0.68
IGL02256:Dennd4c APN 4 86,799,541 (GRCm38) missense probably damaging 0.96
IGL02396:Dennd4c APN 4 86,825,000 (GRCm38) missense probably damaging 1.00
IGL02523:Dennd4c APN 4 86,774,253 (GRCm38) unclassified probably benign
IGL02615:Dennd4c APN 4 86,821,467 (GRCm38) missense probably benign 0.00
IGL03069:Dennd4c APN 4 86,774,437 (GRCm38) nonsense probably null
IGL03116:Dennd4c APN 4 86,788,820 (GRCm38) splice site probably benign
IGL03117:Dennd4c APN 4 86,777,903 (GRCm38) missense possibly damaging 0.95
IGL03273:Dennd4c APN 4 86,777,796 (GRCm38) missense probably damaging 1.00
IGL03329:Dennd4c APN 4 86,777,876 (GRCm38) missense probably damaging 1.00
IGL03365:Dennd4c APN 4 86,807,426 (GRCm38) critical splice acceptor site probably null
PIT4486001:Dennd4c UTSW 4 86,799,464 (GRCm38) nonsense probably null
R0010:Dennd4c UTSW 4 86,781,577 (GRCm38) missense probably damaging 1.00
R0032:Dennd4c UTSW 4 86,828,150 (GRCm38) critical splice donor site probably null
R0032:Dennd4c UTSW 4 86,828,150 (GRCm38) critical splice donor site probably null
R0092:Dennd4c UTSW 4 86,781,607 (GRCm38) missense probably damaging 1.00
R0103:Dennd4c UTSW 4 86,812,446 (GRCm38) missense probably benign 0.07
R0103:Dennd4c UTSW 4 86,812,446 (GRCm38) missense probably benign 0.07
R0511:Dennd4c UTSW 4 86,826,022 (GRCm38) missense probably damaging 1.00
R0515:Dennd4c UTSW 4 86,813,466 (GRCm38) missense possibly damaging 0.94
R0578:Dennd4c UTSW 4 86,812,422 (GRCm38) missense probably damaging 1.00
R0759:Dennd4c UTSW 4 86,788,829 (GRCm38) missense probably damaging 1.00
R0784:Dennd4c UTSW 4 86,844,908 (GRCm38) missense probably benign 0.37
R1156:Dennd4c UTSW 4 86,807,466 (GRCm38) missense probably damaging 1.00
R1370:Dennd4c UTSW 4 86,811,510 (GRCm38) missense probably damaging 1.00
R1381:Dennd4c UTSW 4 86,774,532 (GRCm38) missense probably benign 0.24
R1569:Dennd4c UTSW 4 86,786,094 (GRCm38) missense possibly damaging 0.59
R1747:Dennd4c UTSW 4 86,807,438 (GRCm38) missense probably damaging 1.00
R1764:Dennd4c UTSW 4 86,803,010 (GRCm38) missense probably damaging 1.00
R1838:Dennd4c UTSW 4 86,825,178 (GRCm38) missense probably benign 0.00
R1997:Dennd4c UTSW 4 86,837,397 (GRCm38) missense probably benign
R2244:Dennd4c UTSW 4 86,774,543 (GRCm38) missense probably damaging 1.00
R2348:Dennd4c UTSW 4 86,811,527 (GRCm38) missense probably benign 0.04
R2968:Dennd4c UTSW 4 86,781,644 (GRCm38) missense possibly damaging 0.93
R3033:Dennd4c UTSW 4 86,825,320 (GRCm38) small deletion probably benign
R3401:Dennd4c UTSW 4 86,774,543 (GRCm38) missense probably damaging 1.00
R3402:Dennd4c UTSW 4 86,774,543 (GRCm38) missense probably damaging 1.00
R3403:Dennd4c UTSW 4 86,774,543 (GRCm38) missense probably damaging 1.00
R3855:Dennd4c UTSW 4 86,779,847 (GRCm38) missense probably damaging 1.00
R3939:Dennd4c UTSW 4 86,774,280 (GRCm38) missense probably damaging 1.00
R4164:Dennd4c UTSW 4 86,807,527 (GRCm38) missense probably benign 0.01
R4384:Dennd4c UTSW 4 86,811,450 (GRCm38) missense probably damaging 1.00
R4435:Dennd4c UTSW 4 86,798,075 (GRCm38) missense probably benign 0.44
R4788:Dennd4c UTSW 4 86,819,963 (GRCm38) missense probably benign 0.00
R4801:Dennd4c UTSW 4 86,819,884 (GRCm38) nonsense probably null
R4802:Dennd4c UTSW 4 86,819,884 (GRCm38) nonsense probably null
R4818:Dennd4c UTSW 4 86,825,274 (GRCm38) missense probably benign 0.00
R4923:Dennd4c UTSW 4 86,807,538 (GRCm38) missense probably damaging 1.00
R4958:Dennd4c UTSW 4 86,781,679 (GRCm38) missense probably damaging 1.00
R5025:Dennd4c UTSW 4 86,795,299 (GRCm38) critical splice donor site probably null
R5434:Dennd4c UTSW 4 86,811,456 (GRCm38) missense probably benign 0.10
R5662:Dennd4c UTSW 4 86,795,288 (GRCm38) missense probably benign 0.13
R5802:Dennd4c UTSW 4 86,811,453 (GRCm38) missense probably benign 0.02
R5849:Dennd4c UTSW 4 86,825,986 (GRCm38) missense possibly damaging 0.58
R5861:Dennd4c UTSW 4 86,791,352 (GRCm38) missense probably benign 0.30
R5970:Dennd4c UTSW 4 86,825,512 (GRCm38) missense probably damaging 1.00
R6163:Dennd4c UTSW 4 86,805,591 (GRCm38) missense possibly damaging 0.56
R6356:Dennd4c UTSW 4 86,825,449 (GRCm38) missense probably benign
R6661:Dennd4c UTSW 4 86,799,389 (GRCm38) missense possibly damaging 0.66
R6855:Dennd4c UTSW 4 86,836,457 (GRCm38) missense probably benign
R6983:Dennd4c UTSW 4 86,799,493 (GRCm38) missense probably damaging 1.00
R7035:Dennd4c UTSW 4 86,812,337 (GRCm38) missense probably damaging 1.00
R7126:Dennd4c UTSW 4 86,807,430 (GRCm38) missense probably damaging 1.00
R7185:Dennd4c UTSW 4 86,811,450 (GRCm38) missense probably damaging 1.00
R7212:Dennd4c UTSW 4 86,802,991 (GRCm38) missense probably damaging 1.00
R7324:Dennd4c UTSW 4 86,829,738 (GRCm38) missense unknown
R7329:Dennd4c UTSW 4 86,841,081 (GRCm38) missense probably damaging 1.00
R7329:Dennd4c UTSW 4 86,779,874 (GRCm38) missense possibly damaging 0.81
R7479:Dennd4c UTSW 4 86,799,353 (GRCm38) missense probably damaging 1.00
R7538:Dennd4c UTSW 4 86,774,516 (GRCm38) missense probably damaging 1.00
R7599:Dennd4c UTSW 4 86,811,612 (GRCm38) missense probably damaging 1.00
R7688:Dennd4c UTSW 4 86,795,140 (GRCm38) missense probably damaging 1.00
R7725:Dennd4c UTSW 4 86,786,093 (GRCm38) missense probably benign 0.00
R7751:Dennd4c UTSW 4 86,828,942 (GRCm38) missense probably benign 0.05
R7790:Dennd4c UTSW 4 86,799,517 (GRCm38) missense probably damaging 0.96
R8056:Dennd4c UTSW 4 86,844,976 (GRCm38) missense probably null 0.71
R8307:Dennd4c UTSW 4 86,825,872 (GRCm38) missense probably benign 0.12
R8494:Dennd4c UTSW 4 86,841,075 (GRCm38) missense probably damaging 1.00
R8531:Dennd4c UTSW 4 86,826,082 (GRCm38) critical splice donor site probably null
R9014:Dennd4c UTSW 4 86,836,429 (GRCm38) missense probably benign 0.00
R9014:Dennd4c UTSW 4 86,821,465 (GRCm38) missense probably benign 0.07
R9017:Dennd4c UTSW 4 86,825,112 (GRCm38) missense probably benign 0.33
R9142:Dennd4c UTSW 4 86,837,400 (GRCm38) missense probably benign 0.32
R9224:Dennd4c UTSW 4 86,819,933 (GRCm38) nonsense probably null
R9570:Dennd4c UTSW 4 86,828,971 (GRCm38) missense possibly damaging 0.71
R9644:Dennd4c UTSW 4 86,795,126 (GRCm38) missense probably damaging 0.99
R9649:Dennd4c UTSW 4 86,824,923 (GRCm38) missense probably benign 0.00
R9658:Dennd4c UTSW 4 86,836,388 (GRCm38) nonsense probably null
Predicted Primers PCR Primer
(F):5'- GTGGTACCTGATTATTCCTAACTCAAG -3'
(R):5'- TGTAAGGGGCGGCTTATCTCTC -3'

Sequencing Primer
(F):5'- CTCAAGAATGTCTTCATCTTGATCAG -3'
(R):5'- CTGTAGCACAGGAAAAGCTCTG -3'
Posted On 2019-10-07