Mutagenetix > Incidental Mutation

Incidental Mutation 'R7466:Prkcz'

578758

Institutional Source

Beutler Lab

Gene Symbol

Prkcz

Ensembl Gene

ENSMUSG00000029053

Gene Name

protein kinase C, zeta

Synonyms

Pkcz, zetaPKC, aPKCzeta

MMRRC Submission

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7466 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

155260129-155361361 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 155271602 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Serine at position 355 (F355S)

Ref Sequence

ENSEMBL: ENSMUSP00000030922 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030922] [ENSMUST00000103178]

AlphaFold

Q02956

Predicted Effect

probably damaging
Transcript: ENSMUST00000030922
AA Change: F355S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000030922
Gene: ENSMUSG00000029053
AA Change: F355S

Domain	Start	End	E-Value	Type
PB1	15	98	4.55e-24	SMART
C1	131	180	6.73e-17	SMART
S_TKc	252	518	5.49e-94	SMART
S_TK_X	519	582	2.58e-21	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000103178
AA Change: F172S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000099467
Gene: ENSMUSG00000029053
AA Change: F172S

Domain	Start	End	E-Value	Type
S_TKc	69	335	5.49e-94	SMART
S_TK_X	336	399	2.58e-21	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

99% (83/84)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Protein kinase C (PKC) zeta is a member of the PKC family of serine/threonine kinases which are involved in a variety of cellular processes such as proliferation, differentiation and secretion. Unlike the classical PKC isoenzymes which are calcium-dependent, PKC zeta exhibits a kinase activity which is independent of calcium and diacylglycerol but not of phosphatidylserine. Furthermore, it is insensitive to typical PKC inhibitors and cannot be activated by phorbol ester. Unlike the classical PKC isoenzymes, it has only a single zinc finger module. These structural and biochemical properties indicate that the zeta subspecies is related to, but distinct from other isoenzymes of PKC. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
PHENOTYPE: Young, not mature, homozygous null mice have reduced B cell numbers and abnormal secondary lymph organ structure. Young mice have fewer Peyer's patches, poor delineation of B & T cell zones, and fewer follicles of small size. Spleens have less prominent B cell follicles and abnormal marginal zones. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 83 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
AI182371	T	A	2: 35,088,741	K203*	probably null	Het
Akr1c13	T	C	13: 4,192,437		probably benign	Het
Amer3	A	G	1: 34,587,993	S438G	probably damaging	Het
Aqp9	T	A	9: 71,163,261		probably null	Het
Art4	G	T	6: 136,854,850	H98N	probably damaging	Het
Bdh1	T	C	16: 31,447,604	S70P	probably benign	Het
Ccdc61	A	C	7: 18,891,105	Y503D	probably damaging	Het
Cd163l1	T	C	7: 140,220,706		probably null	Het
Cd180	A	T	13: 102,704,995	N183I	probably damaging	Het
Cd200r2	C	T	16: 44,909,174	A64V	probably damaging	Het
Ceacam9	A	C	7: 16,723,855	K98Q	probably benign	Het
Cep44	AACGC	A	8: 56,540,983		probably null	Het
Cfap77	G	T	2: 28,955,613	D247E	probably benign	Het
Cftr	T	C	6: 18,227,973	M388T	probably benign	Het
Chrnb1	G	A	11: 69,784,650	H493Y	probably damaging	Het
Ckap2	A	C	8: 22,177,386	M153R	probably benign	Het
Cnot6l	A	G	5: 96,131,128	V77A	probably benign	Het
Col12a1	C	T	9: 79,655,407	E1798K	possibly damaging	Het
Cth	T	A	3: 157,924,885	D49V	probably benign	Het
Ctnnb1	T	C	9: 120,955,416	S425P	probably damaging	Het
Ctnnd1	T	C	2: 84,610,785	N690S	probably benign	Het
Cyhr1	C	T	15: 76,648,186	D241N	probably benign	Het
Dennd4c	A	G	4: 86,774,331	D26G	probably damaging	Het
Dlg5	G	A	14: 24,245,212	P80L	probably damaging	Het
Eef2k	A	G	7: 120,903,484		probably null	Het
Ephb2	C	T	4: 136,659,065	R791H	probably damaging	Het
Erh	T	C	12: 80,640,983	Y22C	probably benign	Het
F5	C	T	1: 164,193,328	T1124I	possibly damaging	Het
Fam220a	T	A	5: 143,563,471	C213S	possibly damaging	Het
Fat2	G	T	11: 55,310,432	N605K	probably damaging	Het
Ganab	C	A	19: 8,914,569	S780*	probably null	Het
Gbgt1	C	T	2: 28,502,207	P67S	probably damaging	Het
Gm17190	G	T	13: 96,082,779	G208*	probably null	Het
Grhl2	A	G	15: 37,291,616	Y316C	probably damaging	Het
H2-T10	T	C	17: 36,120,849	T38A	probably benign	Het
Ins1	A	G	19: 52,264,420		probably benign	Het
Ippk	T	C	13: 49,432,467		probably null	Het
Klc4	T	A	17: 46,639,910	I258F	probably benign	Het
Manba	C	A	3: 135,542,393	L348I	probably benign	Het
Mgam	A	G	6: 40,744,789	N347S	probably benign	Het
Myo18b	T	C	5: 112,723,892	T2108A	probably benign	Het
Naip5	A	T	13: 100,221,986	L914*	probably null	Het
Nsa2	C	T	13: 97,131,220	A242T	probably benign	Het
Nsd2	G	A	5: 33,882,147	W834*	probably null	Het
Olfr1134	T	C	2: 87,656,396	N175S	possibly damaging	Het
Olfr1419	T	A	19: 11,870,316	D300V	possibly damaging	Het
Olfr285	T	C	15: 98,313,380	M57V	probably damaging	Het
Olfr469	A	T	7: 107,822,922	C182*	probably null	Het
Pam	A	T	1: 97,842,247	D599E	probably damaging	Het
Phf20l1	A	G	15: 66,636,884	K864R	probably damaging	Het
Plcl2	A	G	17: 50,608,468	D835G	probably damaging	Het
Ppm1m	C	A	9: 106,196,157	A329S	probably damaging	Het
Prep	T	C	10: 45,150,438	V486A	probably benign	Het
Prkcb	A	T	7: 122,516,844	N182I	probably damaging	Het
Psg20	C	T	7: 18,684,467	S125N	probably benign	Het
Psmd12	A	G	11: 107,492,057	D234G	probably benign	Het
Pvrig	A	T	5: 138,342,008	M14L	probably benign	Het
Rabgap1l	C	T	1: 160,226,484		probably null	Het
Rfc1	A	T	5: 65,275,426	C764S	probably damaging	Het
Ryr3	T	C	2: 112,926,957	D351G	probably benign	Het
Serpinb9g	T	C	13: 33,495,167	F340S	probably benign	Het
Sirpb1c	C	A	3: 15,832,266	L315F	probably damaging	Het
Slc24a1	C	G	9: 64,928,404	E814Q	unknown	Het
Slc26a11	A	T	11: 119,374,502	Q355L	probably damaging	Het
Sp100	C	T	1: 85,707,239	L483F	possibly damaging	Het
St5	A	G	7: 109,525,346	L1096P	probably damaging	Het
Ston1	T	A	17: 88,635,901	M245K	probably benign	Het
Swap70	T	A	7: 110,274,772	D442E	probably benign	Het
Syne2	T	A	12: 76,046,186	V450D	possibly damaging	Het
Tbck	T	A	3: 132,752,563	N651K	probably damaging	Het
Timd4	A	T	11: 46,817,758	T204S	probably benign	Het
Tmem102	A	G	11: 69,804,885	L87P	probably damaging	Het
Tmem55a	T	A	4: 14,912,477	Y195*	probably null	Het
Tmprss11e	T	A	5: 86,709,480	T325S	probably benign	Het
Trpm1	G	A	7: 64,240,582	V978M	probably damaging	Het
Wdr12	A	T	1: 60,094,511	D19E	probably benign	Het
Wdr35	G	A	12: 9,005,773	V482I	probably benign	Het
Wdr63	T	C	3: 146,055,618	D661G	probably benign	Het
Zer1	T	C	2: 30,101,484		probably null	Het
Zfp503	T	C	14: 21,986,011	D279G	probably benign	Het
Zfp870	A	T	17: 32,883,762	C198S	possibly damaging	Het
Zfyve26	C	T	12: 79,287,807	E146K	probably benign	Het
Zkscan6	T	C	11: 65,828,531	V459A	probably damaging	Het

Other mutations in Prkcz

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00501:Prkcz	APN	4	155294401	splice site	probably benign
IGL02114:Prkcz	APN	4	155271590	missense	probably damaging	1.00
IGL02582:Prkcz	APN	4	155271256	missense	probably damaging	1.00
IGL03010:Prkcz	APN	4	155286805	missense	probably damaging	1.00
IGL03199:Prkcz	APN	4	155272984	missense	possibly damaging	0.85
IGL03225:Prkcz	APN	4	155268195	missense	probably damaging	0.99
IGL03229:Prkcz	APN	4	155262506	missense	probably benign	0.19
IGL03299:Prkcz	APN	4	155286790	missense	possibly damaging	0.78
PIT4403001:Prkcz	UTSW	4	155293156	critical splice donor site	probably null
R0389:Prkcz	UTSW	4	155269140	missense	probably damaging	1.00
R0443:Prkcz	UTSW	4	155269140	missense	probably damaging	1.00
R1666:Prkcz	UTSW	4	155289751	missense	probably damaging	1.00
R1668:Prkcz	UTSW	4	155289751	missense	probably damaging	1.00
R1686:Prkcz	UTSW	4	155271256	missense	probably damaging	1.00
R1710:Prkcz	UTSW	4	155262512	missense	probably damaging	1.00
R2025:Prkcz	UTSW	4	155289710	missense	probably damaging	1.00
R3162:Prkcz	UTSW	4	155290524	missense	probably benign	0.00
R3162:Prkcz	UTSW	4	155290524	missense	probably benign	0.00
R4399:Prkcz	UTSW	4	155269077	missense	possibly damaging	0.86
R4780:Prkcz	UTSW	4	155289702	missense	probably damaging	1.00
R4923:Prkcz	UTSW	4	155357489	missense	probably damaging	1.00
R5160:Prkcz	UTSW	4	155293232	missense	probably benign	0.22
R5510:Prkcz	UTSW	4	155272936	splice site	probably null
R6278:Prkcz	UTSW	4	155268195	missense	probably damaging	0.99
R6290:Prkcz	UTSW	4	155356499	missense	probably damaging	1.00
R6881:Prkcz	UTSW	4	155269056	missense	possibly damaging	0.90
R7055:Prkcz	UTSW	4	155289634	missense	probably benign	0.01
R7108:Prkcz	UTSW	4	155286793	nonsense	probably null
R7241:Prkcz	UTSW	4	155269059	missense	probably benign	0.00
R7355:Prkcz	UTSW	4	155357496	missense	probably damaging	1.00
R7522:Prkcz	UTSW	4	155271285	missense	probably damaging	1.00
R7618:Prkcz	UTSW	4	155262482	missense	probably damaging	1.00
R7753:Prkcz	UTSW	4	155272968	missense	possibly damaging	0.61
R8079:Prkcz	UTSW	4	155357505	missense	probably damaging	1.00
R8407:Prkcz	UTSW	4	155268216	missense	probably damaging	0.99
R8523:Prkcz	UTSW	4	155262511	missense	probably damaging	1.00
R8824:Prkcz	UTSW	4	155344828	start gained	probably benign
X0067:Prkcz	UTSW	4	155354704	missense	probably benign	0.25
Z1176:Prkcz	UTSW	4	155354680	missense	probably damaging	1.00
Z1176:Prkcz	UTSW	4	155356468	missense	probably damaging	1.00
Z1177:Prkcz	UTSW	4	155301004	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GGTGTCAAGGGCAGACAATC -3'
(R):5'- CTCATGTTCTGAGGGACCTTCC -3'

Sequencing Primer
(F):5'- TCAAGGGCAGACAATCGAGTTG -3'
(R):5'- ACATTGTGGGGCTCTATG -3'

Posted On

2019-10-07