Mutagenetix > Incidental Mutation

Incidental Mutation 'R7476:Csmd1'

579494

Institutional Source

Beutler Lab

Gene Symbol

Csmd1

Ensembl Gene

ENSMUSG00000060924

Gene Name

CUB and Sushi multiple domains 1

Synonyms

MMRRC Submission

045550-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7476 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

15892537-17535586 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 15895731 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Arginine at position 3561 (C3561R)

Ref Sequence

ENSEMBL: ENSMUSP00000080751 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000082104]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000082104
AA Change: C3561R

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000080751
Gene: ENSMUSG00000060924
AA Change: C3561R

Domain	Start	End	E-Value	Type
signal peptide	1	29	N/A	INTRINSIC
CUB	32	140	1.46e-26	SMART
CCP	145	202	1.01e-11	SMART
CUB	208	312	1.05e-27	SMART
CCP	349	406	1.28e-8	SMART
CUB	411	522	2.34e-25	SMART
CCP	527	580	1.22e-14	SMART
CUB	584	692	1.61e-37	SMART
CCP	697	754	4.41e-12	SMART
CUB	758	866	6.55e-38	SMART
CCP	873	926	2.53e-12	SMART
CUB	930	1040	8.94e-22	SMART
CCP	1045	1100	7.06e-11	SMART
CUB	1104	1212	3.14e-26	SMART
CCP	1217	1273	1.18e-12	SMART
CUB	1277	1386	9.72e-32	SMART
CCP	1391	1447	2.06e-12	SMART
CUB	1451	1559	1.68e-35	SMART
CCP	1564	1621	2.53e-12	SMART
CUB	1625	1733	4.24e-14	SMART
CCP	1741	1798	9.46e-12	SMART
CUB	1802	1910	4.23e-32	SMART
CCP	1915	1970	8.23e-12	SMART
CUB	1974	2082	8.59e-33	SMART
CCP	2087	2142	6.09e-15	SMART
CUB	2146	2253	2.36e-30	SMART
CCP	2258	2315	1.1e-12	SMART
CUB	2320	2430	4.3e-24	SMART
CCP	2432	2490	2.94e-8	SMART
CCP	2495	2552	2.03e-11	SMART
CCP	2557	2617	1.22e-5	SMART
CCP	2622	2675	2.72e-12	SMART
CCP	2680	2733	5.86e-17	SMART
CCP	2738	2791	6.09e-15	SMART
CCP	2796	2854	9.1e-14	SMART
CCP	2859	2912	3.96e-14	SMART
CCP	2920	2973	4.41e-12	SMART
CCP	2978	3032	2.94e-8	SMART
CCP	3037	3092	6.59e-11	SMART
CCP	3097	3150	4.12e-12	SMART
CCP	3155	3208	7.92e-14	SMART
CCP	3216	3270	2.8e-14	SMART
CCP	3275	3330	3.78e-11	SMART
transmembrane domain	3487	3509	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.2%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice exhibit normal pre-pulse inhibition, social interaction, sucrose preference and d-amphetamine sensitivity. [provided by MGI curators]

Allele List at MGI

All alleles(1) : Targeted, knock-out(1)

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
5730596B20Rik	C	T	6: 52,179,034 (GRCm38)	P27S	unknown	Het
Abi3bp	A	T	16: 56,614,746 (GRCm38)	K602*	probably null	Het
Adam29	G	T	8: 55,873,195 (GRCm38)	H75N	probably damaging	Het
Ajap1	C	T	4: 153,384,855 (GRCm38)	E373K	probably damaging	Het
Alg6	C	A	4: 99,743,876 (GRCm38)	H206N	probably damaging	Het
Alox5	A	T	6: 116,415,433 (GRCm38)	S376T	probably benign	Het
Arhgap19	A	T	19: 41,782,363 (GRCm38)	Y321N	probably benign	Het
Brip1	A	G	11: 86,157,808 (GRCm38)	V236A	probably benign	Het
C1ra	C	T	6: 124,522,699 (GRCm38)	P615S	probably damaging	Het
Ccdc69	C	T	11: 55,051,198 (GRCm38)	V161I	possibly damaging	Het
Chil5	G	A	3: 106,020,007 (GRCm38)	R163C	possibly damaging	Het
Cldnd1	A	G	16: 58,729,544 (GRCm38)	D30G	probably damaging	Het
Colca2	G	A	9: 51,277,600 (GRCm38)	A19V	possibly damaging	Het
Daxx	T	G	17: 33,911,281 (GRCm38)	V90G	probably damaging	Het
Dgkg	T	A	16: 22,622,304 (GRCm38)		probably benign	Het
Dmrta2	A	G	4: 109,982,025 (GRCm38)	H323R	probably damaging	Het
Dysf	A	T	6: 84,064,896 (GRCm38)	T161S	probably benign	Het
Fat1	G	T	8: 45,031,274 (GRCm38)	R3183L	probably benign	Het
Fcho1	C	A	8: 71,713,546 (GRCm38)	D347Y	probably damaging	Het
Gm21798	T	C	15: 64,817,706 (GRCm38)	C5R	unknown	Het
Hmcn1	T	C	1: 150,580,267 (GRCm38)	R5301G	probably damaging	Het
Hoxd11	T	C	2: 74,684,115 (GRCm38)	F330L	probably damaging	Het
Lactbl1	A	G	4: 136,637,639 (GRCm38)	D434G	probably benign	Het
Lgals8	A	T	13: 12,448,481 (GRCm38)	N191K	probably damaging	Het
Lmod2	T	A	6: 24,597,921 (GRCm38)	Y13*	probably null	Het
Malrd1	T	C	2: 16,142,304 (GRCm38)	S1986P	unknown	Het
Map3k9	C	T	12: 81,743,808 (GRCm38)	D324N	probably damaging	Het
Mcmbp	C	A	7: 128,703,582 (GRCm38)	K487N	probably damaging	Het
Mrpl4	G	T	9: 21,002,771 (GRCm38)		probably benign	Het
Nectin2	T	C	7: 19,717,621 (GRCm38)	D496G	possibly damaging	Het
Nom1	T	C	5: 29,442,536 (GRCm38)	S590P	probably benign	Het
Noto	T	C	6: 85,425,499 (GRCm38)	F156L	probably damaging	Het
Nrf1	T	A	6: 30,116,272 (GRCm38)	D314E	probably damaging	Het
Nup93	T	C	8: 94,303,632 (GRCm38)	L373P	probably damaging	Het
Olfr1002	T	A	2: 85,648,168 (GRCm38)	Q51L	not run	Het
Olfr1168	A	T	2: 88,184,966 (GRCm38)	M30L	probably benign	Het
Olfr1205	A	G	2: 88,831,588 (GRCm38)	Q157R	probably benign	Het
Olfr1239	T	C	2: 89,417,499 (GRCm38)	K305E	possibly damaging	Het
Olfr1369-ps1	A	C	13: 21,116,021 (GRCm38)	I110L	probably benign	Het
Olfr1412	A	C	1: 92,589,264 (GRCm38)	R311S	probably benign	Het
Pclo	A	T	5: 14,521,331 (GRCm38)	K243N	probably damaging	Het
Pdgfra	T	A	5: 75,170,603 (GRCm38)	C290S	probably damaging	Het
Pnlip	G	A	19: 58,679,634 (GRCm38)		probably null	Het
Ptprm	A	T	17: 66,725,791 (GRCm38)	H1022Q	probably benign	Het
Rfx2	T	C	17: 56,803,527 (GRCm38)	D153G	probably benign	Het
Rps6ka2	T	C	17: 7,271,633 (GRCm38)	F317L	probably damaging	Het
Rtl1	T	A	12: 109,591,105 (GRCm38)	E1433D	unknown	Het
Sarnp	A	G	10: 128,833,354 (GRCm38)	T27A	probably benign	Het
Shc3	A	T	13: 51,448,006 (GRCm38)	M295K	probably benign	Het
Slc1a3	T	A	15: 8,643,084 (GRCm38)	M304L	probably damaging	Het
Slco1a6	G	T	6: 142,103,001 (GRCm38)	T351K	possibly damaging	Het
Snrk	A	G	9: 122,157,222 (GRCm38)	N219S	probably damaging	Het
Spats2	T	A	15: 99,212,141 (GRCm38)	V473E	probably benign	Het
Stk35	T	C	2: 129,810,725 (GRCm38)	L382P	probably damaging	Het
Tbx10	T	C	19: 3,999,034 (GRCm38)	V315A	probably benign	Het
Tdpoz1	A	G	3: 93,670,775 (GRCm38)	L234P	probably damaging	Het
Ttn	T	G	2: 76,714,145 (GRCm38)	E32832D	probably benign	Het
Ttn	T	C	2: 76,771,186 (GRCm38)	Y18678C	probably damaging	Het
Ugt2a2	A	T	5: 87,474,494 (GRCm38)	M205K	probably damaging	Het
Utrn	C	A	10: 12,640,951 (GRCm38)	V2300L	probably benign	Het
Vmn1r175	T	C	7: 23,808,422 (GRCm38)	N260S	probably benign	Het
Vmn1r63	T	A	7: 5,803,001 (GRCm38)	I211L	probably benign	Het
Vmn1r83	A	G	7: 12,321,615 (GRCm38)	W172R	possibly damaging	Het
Xirp2	T	C	2: 67,510,634 (GRCm38)	L1073P	probably benign	Het
Zfp82	A	G	7: 30,056,172 (GRCm38)	V495A	possibly damaging	Het

Other mutations in Csmd1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00095:Csmd1	APN	8	16,009,297 (GRCm38)	splice site	probably benign
IGL00433:Csmd1	APN	8	16,231,373 (GRCm38)	missense	probably damaging	1.00
IGL00500:Csmd1	APN	8	15,921,139 (GRCm38)	missense	probably damaging	1.00
IGL00666:Csmd1	APN	8	16,189,990 (GRCm38)	missense	probably damaging	1.00
IGL00913:Csmd1	APN	8	16,071,287 (GRCm38)	missense	probably benign	0.00
IGL01012:Csmd1	APN	8	15,917,341 (GRCm38)	missense	probably benign	0.00
IGL01123:Csmd1	APN	8	17,534,928 (GRCm38)	missense	possibly damaging	0.96
IGL01348:Csmd1	APN	8	15,910,596 (GRCm38)	missense	probably damaging	0.99
IGL01444:Csmd1	APN	8	16,200,055 (GRCm38)	missense	probably benign	0.00
IGL01530:Csmd1	APN	8	15,903,195 (GRCm38)	missense	probably damaging	0.99
IGL01548:Csmd1	APN	8	16,288,646 (GRCm38)	nonsense	probably null
IGL01814:Csmd1	APN	8	16,501,375 (GRCm38)	missense	probably damaging	1.00
IGL01889:Csmd1	APN	8	15,998,857 (GRCm38)	missense	probably damaging	1.00
IGL02055:Csmd1	APN	8	16,069,001 (GRCm38)	missense	probably damaging	0.99
IGL02066:Csmd1	APN	8	15,926,594 (GRCm38)	missense	probably damaging	1.00
IGL02097:Csmd1	APN	8	16,211,759 (GRCm38)	missense	probably null	0.17
IGL02112:Csmd1	APN	8	16,081,705 (GRCm38)	missense	probably benign	0.18
IGL02161:Csmd1	APN	8	16,358,412 (GRCm38)	missense	probably damaging	0.97
IGL02189:Csmd1	APN	8	16,271,606 (GRCm38)	missense	probably damaging	0.99
IGL02272:Csmd1	APN	8	16,199,893 (GRCm38)	missense	probably damaging	0.99
IGL02292:Csmd1	APN	8	16,211,870 (GRCm38)	missense	probably damaging	1.00
IGL02385:Csmd1	APN	8	15,903,275 (GRCm38)	missense	probably benign	0.08
IGL02424:Csmd1	APN	8	16,092,326 (GRCm38)	missense	probably benign	0.22
IGL02492:Csmd1	APN	8	16,002,597 (GRCm38)	missense	probably benign	0.13
IGL02507:Csmd1	APN	8	17,534,976 (GRCm38)	utr 5 prime	probably benign
IGL02513:Csmd1	APN	8	15,999,869 (GRCm38)	splice site	probably benign
IGL02727:Csmd1	APN	8	16,231,327 (GRCm38)	missense	probably damaging	1.00
IGL02728:Csmd1	APN	8	15,999,779 (GRCm38)	critical splice donor site	probably null
IGL02852:Csmd1	APN	8	15,895,728 (GRCm38)	missense	probably damaging	0.99
IGL02935:Csmd1	APN	8	16,223,334 (GRCm38)	missense	probably damaging	1.00
IGL02945:Csmd1	APN	8	16,271,570 (GRCm38)	missense	possibly damaging	0.92
IGL02959:Csmd1	APN	8	15,910,465 (GRCm38)	missense	probably damaging	0.99
IGL03113:Csmd1	APN	8	16,028,698 (GRCm38)	missense	probably benign
IGL03129:Csmd1	APN	8	15,961,521 (GRCm38)	missense	probably damaging	0.99
IGL03131:Csmd1	APN	8	16,088,217 (GRCm38)	missense	probably damaging	1.00
IGL03275:Csmd1	APN	8	16,157,092 (GRCm38)	missense	probably benign	0.00
IGL03297:Csmd1	APN	8	16,009,432 (GRCm38)	nonsense	probably null
ikura	UTSW	8	16,231,271 (GRCm38)	missense	probably damaging	1.00
I2289:Csmd1	UTSW	8	15,912,381 (GRCm38)	missense	probably benign	0.10
IGL03055:Csmd1	UTSW	8	16,095,501 (GRCm38)	missense	probably damaging	1.00
IGL03097:Csmd1	UTSW	8	15,945,127 (GRCm38)	missense	probably damaging	1.00
PIT4260001:Csmd1	UTSW	8	16,070,313 (GRCm38)	missense	probably damaging	1.00
PIT4378001:Csmd1	UTSW	8	15,895,728 (GRCm38)	missense	probably damaging	0.99
PIT4520001:Csmd1	UTSW	8	15,906,023 (GRCm38)	missense	probably benign	0.01
R0037:Csmd1	UTSW	8	15,917,248 (GRCm38)	missense	probably damaging	0.97
R0095:Csmd1	UTSW	8	16,233,051 (GRCm38)	missense	probably damaging	1.00
R0113:Csmd1	UTSW	8	15,984,849 (GRCm38)	missense	probably damaging	1.00
R0129:Csmd1	UTSW	8	16,079,942 (GRCm38)	missense	possibly damaging	0.95
R0144:Csmd1	UTSW	8	16,391,824 (GRCm38)	missense	probably benign	0.16
R0166:Csmd1	UTSW	8	16,233,022 (GRCm38)	missense	probably benign	0.29
R0227:Csmd1	UTSW	8	16,391,822 (GRCm38)	missense	probably benign	0.05
R0279:Csmd1	UTSW	8	16,223,235 (GRCm38)	missense	probably damaging	0.99
R0280:Csmd1	UTSW	8	16,271,602 (GRCm38)	missense	probably damaging	1.00
R0312:Csmd1	UTSW	8	15,984,760 (GRCm38)	missense	probably damaging	1.00
R0355:Csmd1	UTSW	8	15,918,330 (GRCm38)	missense	probably damaging	0.97
R0367:Csmd1	UTSW	8	15,917,270 (GRCm38)	missense	probably damaging	1.00
R0395:Csmd1	UTSW	8	16,346,638 (GRCm38)	missense	probably damaging	0.99
R0413:Csmd1	UTSW	8	16,710,514 (GRCm38)	missense	probably damaging	0.97
R0457:Csmd1	UTSW	8	16,501,393 (GRCm38)	critical splice acceptor site	probably null
R0463:Csmd1	UTSW	8	15,921,759 (GRCm38)	missense	probably damaging	0.99
R0482:Csmd1	UTSW	8	16,233,101 (GRCm38)	missense	probably damaging	1.00
R0501:Csmd1	UTSW	8	17,027,323 (GRCm38)	missense	probably damaging	0.97
R0505:Csmd1	UTSW	8	15,992,758 (GRCm38)	missense	probably damaging	1.00
R0507:Csmd1	UTSW	8	16,185,344 (GRCm38)	splice site	probably benign
R0511:Csmd1	UTSW	8	15,932,529 (GRCm38)	missense	possibly damaging	0.80
R0555:Csmd1	UTSW	8	16,185,273 (GRCm38)	missense	probably benign
R0580:Csmd1	UTSW	8	15,910,528 (GRCm38)	missense	probably damaging	1.00
R0610:Csmd1	UTSW	8	15,918,208 (GRCm38)	missense	possibly damaging	0.95
R0634:Csmd1	UTSW	8	16,226,391 (GRCm38)	missense	probably damaging	1.00
R0666:Csmd1	UTSW	8	16,069,049 (GRCm38)	missense	possibly damaging	0.88
R0674:Csmd1	UTSW	8	16,000,550 (GRCm38)	missense	probably benign	0.03
R0675:Csmd1	UTSW	8	16,158,131 (GRCm38)	missense	probably benign	0.01
R0763:Csmd1	UTSW	8	17,027,284 (GRCm38)	missense	possibly damaging	0.67
R0781:Csmd1	UTSW	8	15,921,174 (GRCm38)	missense	probably benign	0.35
R0862:Csmd1	UTSW	8	16,190,026 (GRCm38)	missense	probably damaging	0.99
R0864:Csmd1	UTSW	8	16,190,026 (GRCm38)	missense	probably damaging	0.99
R0925:Csmd1	UTSW	8	16,710,618 (GRCm38)	missense	probably benign	0.29
R0926:Csmd1	UTSW	8	16,033,576 (GRCm38)	splice site	probably null
R1005:Csmd1	UTSW	8	16,288,693 (GRCm38)	missense	probably damaging	0.99
R1073:Csmd1	UTSW	8	16,358,463 (GRCm38)	splice site	probably benign
R1185:Csmd1	UTSW	8	16,358,348 (GRCm38)	missense	probably damaging	0.96
R1185:Csmd1	UTSW	8	16,358,348 (GRCm38)	missense	probably damaging	0.96
R1185:Csmd1	UTSW	8	16,358,348 (GRCm38)	missense	probably damaging	0.96
R1256:Csmd1	UTSW	8	16,079,964 (GRCm38)	missense	probably damaging	1.00
R1294:Csmd1	UTSW	8	16,698,036 (GRCm38)	missense	probably damaging	0.99
R1375:Csmd1	UTSW	8	16,463,081 (GRCm38)	splice site	probably null
R1447:Csmd1	UTSW	8	15,925,306 (GRCm38)	nonsense	probably null
R1450:Csmd1	UTSW	8	15,945,180 (GRCm38)	critical splice acceptor site	probably null
R1470:Csmd1	UTSW	8	16,157,204 (GRCm38)	splice site	probably benign
R1580:Csmd1	UTSW	8	15,925,299 (GRCm38)	missense	probably damaging	1.00
R1591:Csmd1	UTSW	8	15,900,710 (GRCm38)	missense	probably damaging	0.99
R1658:Csmd1	UTSW	8	16,081,725 (GRCm38)	missense	possibly damaging	0.69
R1678:Csmd1	UTSW	8	15,918,252 (GRCm38)	missense	possibly damaging	0.58
R1717:Csmd1	UTSW	8	17,216,692 (GRCm38)	missense	possibly damaging	0.58
R1735:Csmd1	UTSW	8	15,932,610 (GRCm38)	missense	probably damaging	0.99
R1750:Csmd1	UTSW	8	15,917,303 (GRCm38)	missense	probably damaging	0.99
R1753:Csmd1	UTSW	8	16,157,120 (GRCm38)	nonsense	probably null
R1822:Csmd1	UTSW	8	16,223,326 (GRCm38)	missense	probably damaging	1.00
R1875:Csmd1	UTSW	8	15,929,101 (GRCm38)	missense	probably damaging	0.99
R1909:Csmd1	UTSW	8	15,906,116 (GRCm38)	missense	probably damaging	1.00
R1912:Csmd1	UTSW	8	16,233,998 (GRCm38)	critical splice donor site	probably null
R1993:Csmd1	UTSW	8	16,346,684 (GRCm38)	missense	probably damaging	0.99
R2067:Csmd1	UTSW	8	15,900,782 (GRCm38)	missense	probably benign
R2094:Csmd1	UTSW	8	16,079,978 (GRCm38)	missense	probably damaging	0.99
R2119:Csmd1	UTSW	8	17,216,733 (GRCm38)	missense	probably damaging	0.98
R2127:Csmd1	UTSW	8	15,917,392 (GRCm38)	missense	probably damaging	1.00
R2138:Csmd1	UTSW	8	15,929,088 (GRCm38)	missense	probably damaging	0.96
R2216:Csmd1	UTSW	8	17,027,339 (GRCm38)	critical splice acceptor site	probably null
R2220:Csmd1	UTSW	8	15,992,641 (GRCm38)	missense	possibly damaging	0.94
R2380:Csmd1	UTSW	8	16,190,087 (GRCm38)	missense	probably damaging	1.00
R2471:Csmd1	UTSW	8	16,211,762 (GRCm38)	missense	probably damaging	1.00
R2984:Csmd1	UTSW	8	15,953,782 (GRCm38)	missense	probably damaging	1.00
R3001:Csmd1	UTSW	8	16,196,170 (GRCm38)	missense	probably damaging	0.98
R3002:Csmd1	UTSW	8	16,196,170 (GRCm38)	missense	probably damaging	0.98
R3003:Csmd1	UTSW	8	16,196,170 (GRCm38)	missense	probably damaging	0.98
R3103:Csmd1	UTSW	8	15,917,405 (GRCm38)	missense	probably damaging	1.00
R3104:Csmd1	UTSW	8	17,027,231 (GRCm38)	missense	probably damaging	1.00
R3620:Csmd1	UTSW	8	15,992,684 (GRCm38)	missense	probably benign	0.29
R3621:Csmd1	UTSW	8	15,992,684 (GRCm38)	missense	probably benign	0.29
R3748:Csmd1	UTSW	8	15,906,071 (GRCm38)	missense	probably damaging	0.99
R3780:Csmd1	UTSW	8	16,201,986 (GRCm38)	missense	probably damaging	1.00
R3815:Csmd1	UTSW	8	16,002,522 (GRCm38)	missense	probably damaging	1.00
R3816:Csmd1	UTSW	8	16,002,522 (GRCm38)	missense	probably damaging	1.00
R3818:Csmd1	UTSW	8	16,002,522 (GRCm38)	missense	probably damaging	1.00
R3819:Csmd1	UTSW	8	16,002,522 (GRCm38)	missense	probably damaging	1.00
R3850:Csmd1	UTSW	8	16,079,922 (GRCm38)	missense	probably benign	0.00
R3945:Csmd1	UTSW	8	15,910,619 (GRCm38)	splice site	probably null
R3980:Csmd1	UTSW	8	15,906,056 (GRCm38)	nonsense	probably null
R4061:Csmd1	UTSW	8	15,945,158 (GRCm38)	missense	probably benign	0.00
R4086:Csmd1	UTSW	8	15,992,738 (GRCm38)	missense	probably damaging	0.99
R4087:Csmd1	UTSW	8	15,992,738 (GRCm38)	missense	probably damaging	0.99
R4089:Csmd1	UTSW	8	15,992,738 (GRCm38)	missense	probably damaging	0.99
R4183:Csmd1	UTSW	8	15,910,464 (GRCm38)	missense	probably damaging	0.99
R4226:Csmd1	UTSW	8	16,000,490 (GRCm38)	missense	probably damaging	0.99
R4454:Csmd1	UTSW	8	15,945,011 (GRCm38)	missense	probably damaging	0.99
R4533:Csmd1	UTSW	8	15,931,037 (GRCm38)	splice site	probably null
R4544:Csmd1	UTSW	8	16,710,636 (GRCm38)	missense	possibly damaging	0.93
R4547:Csmd1	UTSW	8	16,391,797 (GRCm38)	missense	possibly damaging	0.48
R4612:Csmd1	UTSW	8	15,921,908 (GRCm38)	splice site	probably null
R4620:Csmd1	UTSW	8	16,002,694 (GRCm38)	critical splice acceptor site	probably null
R4627:Csmd1	UTSW	8	16,697,917 (GRCm38)	missense	probably benign	0.00
R4633:Csmd1	UTSW	8	16,002,620 (GRCm38)	missense	probably damaging	0.99
R4646:Csmd1	UTSW	8	15,932,511 (GRCm38)	missense	possibly damaging	0.87
R4648:Csmd1	UTSW	8	15,998,788 (GRCm38)	nonsense	probably null
R4668:Csmd1	UTSW	8	16,023,891 (GRCm38)	missense	possibly damaging	0.50
R4709:Csmd1	UTSW	8	16,710,506 (GRCm38)	critical splice donor site	probably null
R4709:Csmd1	UTSW	8	16,023,891 (GRCm38)	missense	possibly damaging	0.96
R4741:Csmd1	UTSW	8	15,910,447 (GRCm38)	missense	probably damaging	0.99
R4774:Csmd1	UTSW	8	16,009,369 (GRCm38)	missense	probably benign	0.11
R4793:Csmd1	UTSW	8	16,088,263 (GRCm38)	missense	probably damaging	1.00
R4829:Csmd1	UTSW	8	16,127,296 (GRCm38)	missense	probably damaging	1.00
R4888:Csmd1	UTSW	8	15,895,674 (GRCm38)	utr 3 prime	probably benign
R4896:Csmd1	UTSW	8	16,009,439 (GRCm38)	missense	probably benign	0.00
R4932:Csmd1	UTSW	8	16,023,765 (GRCm38)	missense	probably damaging	0.99
R4944:Csmd1	UTSW	8	15,998,772 (GRCm38)	missense	probably damaging	1.00
R4953:Csmd1	UTSW	8	16,199,917 (GRCm38)	missense	probably damaging	0.99
R4996:Csmd1	UTSW	8	15,910,452 (GRCm38)	missense	probably damaging	0.97
R5028:Csmd1	UTSW	8	15,989,090 (GRCm38)	missense	probably damaging	1.00
R5146:Csmd1	UTSW	8	16,196,190 (GRCm38)	missense	probably damaging	1.00
R5272:Csmd1	UTSW	8	16,199,944 (GRCm38)	missense	probably damaging	0.99
R5327:Csmd1	UTSW	8	17,216,712 (GRCm38)	missense	possibly damaging	0.94
R5399:Csmd1	UTSW	8	16,710,597 (GRCm38)	missense	probably damaging	1.00
R5411:Csmd1	UTSW	8	15,910,471 (GRCm38)	missense	probably damaging	1.00
R5462:Csmd1	UTSW	8	15,961,486 (GRCm38)	missense	probably benign	0.12
R5463:Csmd1	UTSW	8	15,984,860 (GRCm38)	missense	probably benign	0.34
R5497:Csmd1	UTSW	8	16,085,181 (GRCm38)	missense	probably benign	0.20
R5536:Csmd1	UTSW	8	16,288,660 (GRCm38)	missense	probably damaging	0.99
R5711:Csmd1	UTSW	8	15,953,703 (GRCm38)	missense	probably damaging	1.00
R5730:Csmd1	UTSW	8	16,185,192 (GRCm38)	nonsense	probably null
R5788:Csmd1	UTSW	8	16,201,966 (GRCm38)	missense	probably damaging	1.00
R5941:Csmd1	UTSW	8	15,932,471 (GRCm38)	missense	probably damaging	0.99
R5960:Csmd1	UTSW	8	16,071,416 (GRCm38)	missense	possibly damaging	0.68
R5961:Csmd1	UTSW	8	16,070,352 (GRCm38)	missense	probably damaging	0.99
R5969:Csmd1	UTSW	8	16,071,353 (GRCm38)	missense	probably benign	0.00
R5998:Csmd1	UTSW	8	15,910,443 (GRCm38)	missense	probably damaging	1.00
R6062:Csmd1	UTSW	8	16,092,305 (GRCm38)	missense	possibly damaging	0.68
R6109:Csmd1	UTSW	8	16,199,860 (GRCm38)	missense	possibly damaging	0.93
R6116:Csmd1	UTSW	8	16,211,850 (GRCm38)	missense	probably damaging	1.00
R6143:Csmd1	UTSW	8	16,088,301 (GRCm38)	missense	probably damaging	1.00
R6155:Csmd1	UTSW	8	15,903,231 (GRCm38)	missense	probably benign	0.01
R6197:Csmd1	UTSW	8	15,926,611 (GRCm38)	missense	probably benign	0.32
R6247:Csmd1	UTSW	8	16,196,235 (GRCm38)	missense	possibly damaging	0.91
R6304:Csmd1	UTSW	8	16,058,674 (GRCm38)	missense	probably damaging	1.00
R6317:Csmd1	UTSW	8	16,710,642 (GRCm38)	missense	possibly damaging	0.89
R6318:Csmd1	UTSW	8	15,903,212 (GRCm38)	missense	probably damaging	1.00
R6338:Csmd1	UTSW	8	15,932,492 (GRCm38)	missense	possibly damaging	0.75
R6369:Csmd1	UTSW	8	17,535,004 (GRCm38)	start gained	probably benign
R6447:Csmd1	UTSW	8	15,910,527 (GRCm38)	missense	probably damaging	1.00
R6454:Csmd1	UTSW	8	15,921,150 (GRCm38)	missense	probably damaging	0.99
R6494:Csmd1	UTSW	8	16,211,695 (GRCm38)	splice site	probably null
R6614:Csmd1	UTSW	8	17,216,787 (GRCm38)	missense	probably damaging	1.00
R6736:Csmd1	UTSW	8	16,002,626 (GRCm38)	missense	probably damaging	0.99
R6769:Csmd1	UTSW	8	16,071,394 (GRCm38)	missense	possibly damaging	0.80
R6771:Csmd1	UTSW	8	16,071,394 (GRCm38)	missense	possibly damaging	0.80
R6804:Csmd1	UTSW	8	16,037,246 (GRCm38)	missense	probably damaging	1.00
R6818:Csmd1	UTSW	8	16,185,327 (GRCm38)	missense	probably damaging	1.00
R6863:Csmd1	UTSW	8	17,534,913 (GRCm38)	missense	possibly damaging	0.85
R6930:Csmd1	UTSW	8	16,092,395 (GRCm38)	missense	probably damaging	0.97
R6969:Csmd1	UTSW	8	17,216,789 (GRCm38)	missense	possibly damaging	0.94
R7112:Csmd1	UTSW	8	16,101,128 (GRCm38)	missense	probably damaging	1.00
R7124:Csmd1	UTSW	8	15,903,202 (GRCm38)	missense	probably damaging	1.00
R7167:Csmd1	UTSW	8	15,926,524 (GRCm38)	missense	probably benign
R7243:Csmd1	UTSW	8	15,915,357 (GRCm38)	missense	probably damaging	1.00
R7260:Csmd1	UTSW	8	16,000,574 (GRCm38)	missense	probably damaging	1.00
R7271:Csmd1	UTSW	8	17,027,279 (GRCm38)	missense	probably damaging	0.99
R7324:Csmd1	UTSW	8	16,058,707 (GRCm38)	missense	probably damaging	1.00
R7325:Csmd1	UTSW	8	16,058,707 (GRCm38)	missense	probably damaging	1.00
R7327:Csmd1	UTSW	8	16,058,707 (GRCm38)	missense	probably damaging	1.00
R7373:Csmd1	UTSW	8	15,992,713 (GRCm38)	missense	probably damaging	1.00
R7406:Csmd1	UTSW	8	16,288,693 (GRCm38)	missense	probably damaging	0.99
R7427:Csmd1	UTSW	8	16,023,850 (GRCm38)	missense	possibly damaging	0.91
R7428:Csmd1	UTSW	8	16,023,850 (GRCm38)	missense	possibly damaging	0.91
R7445:Csmd1	UTSW	8	16,158,254 (GRCm38)	missense	possibly damaging	0.61
R7458:Csmd1	UTSW	8	15,953,738 (GRCm38)	missense	probably damaging	1.00
R7527:Csmd1	UTSW	8	16,211,718 (GRCm38)	missense	probably damaging	1.00
R7544:Csmd1	UTSW	8	16,092,296 (GRCm38)	missense	probably damaging	1.00
R7583:Csmd1	UTSW	8	15,998,833 (GRCm38)	missense	probably damaging	0.96
R7603:Csmd1	UTSW	8	16,288,682 (GRCm38)	missense	probably damaging	1.00
R7607:Csmd1	UTSW	8	15,918,331 (GRCm38)	missense	possibly damaging	0.94
R7642:Csmd1	UTSW	8	16,085,178 (GRCm38)	missense	probably damaging	0.99
R7669:Csmd1	UTSW	8	15,917,273 (GRCm38)	missense	probably damaging	1.00
R7720:Csmd1	UTSW	8	15,931,108 (GRCm38)	missense	probably damaging	1.00
R7728:Csmd1	UTSW	8	16,231,271 (GRCm38)	missense	probably damaging	1.00
R7738:Csmd1	UTSW	8	16,100,990 (GRCm38)	missense	probably damaging	1.00
R7745:Csmd1	UTSW	8	15,932,461 (GRCm38)	critical splice donor site	probably null
R7879:Csmd1	UTSW	8	16,391,806 (GRCm38)	missense	probably benign	0.28
R7884:Csmd1	UTSW	8	15,961,418 (GRCm38)	missense	probably damaging	1.00
R7897:Csmd1	UTSW	8	17,534,919 (GRCm38)	missense	possibly damaging	0.96
R8111:Csmd1	UTSW	8	15,917,306 (GRCm38)	missense	probably benign
R8119:Csmd1	UTSW	8	17,027,294 (GRCm38)	missense	probably damaging	0.99
R8134:Csmd1	UTSW	8	15,932,550 (GRCm38)	missense	probably damaging	0.99
R8187:Csmd1	UTSW	8	16,127,174 (GRCm38)	missense	probably damaging	0.99
R8196:Csmd1	UTSW	8	16,009,468 (GRCm38)	missense	probably benign	0.18
R8231:Csmd1	UTSW	8	16,697,923 (GRCm38)	missense	possibly damaging	0.82
R8242:Csmd1	UTSW	8	16,710,654 (GRCm38)	missense	probably benign	0.42
R8274:Csmd1	UTSW	8	15,910,453 (GRCm38)	missense	possibly damaging	0.93
R8286:Csmd1	UTSW	8	15,989,188 (GRCm38)	missense	probably benign	0.18
R8289:Csmd1	UTSW	8	16,058,702 (GRCm38)	missense	probably damaging	0.99
R8314:Csmd1	UTSW	8	16,158,244 (GRCm38)	missense	probably benign
R8323:Csmd1	UTSW	8	17,216,735 (GRCm38)	nonsense	probably null
R8387:Csmd1	UTSW	8	16,000,484 (GRCm38)	missense	possibly damaging	0.94
R8413:Csmd1	UTSW	8	15,900,676 (GRCm38)	missense	probably damaging	0.98
R8672:Csmd1	UTSW	8	15,926,598 (GRCm38)	missense	probably benign	0.01
R8765:Csmd1	UTSW	8	16,710,611 (GRCm38)	nonsense	probably null
R8789:Csmd1	UTSW	8	17,216,706 (GRCm38)	missense	probably damaging	0.99
R8828:Csmd1	UTSW	8	15,998,794 (GRCm38)	missense	probably benign	0.00
R8858:Csmd1	UTSW	8	16,070,304 (GRCm38)	missense	probably benign	0.10
R8878:Csmd1	UTSW	8	15,910,528 (GRCm38)	missense	probably damaging	1.00
R8911:Csmd1	UTSW	8	16,698,003 (GRCm38)	missense	probably damaging	0.99
R8966:Csmd1	UTSW	8	16,200,045 (GRCm38)	missense	probably damaging	1.00
R8978:Csmd1	UTSW	8	15,921,056 (GRCm38)	missense	probably benign	0.37
R8996:Csmd1	UTSW	8	15,921,105 (GRCm38)	missense	possibly damaging	0.54
R9045:Csmd1	UTSW	8	16,234,074 (GRCm38)	missense	probably damaging	0.99
R9084:Csmd1	UTSW	8	16,088,311 (GRCm38)	missense	probably benign
R9124:Csmd1	UTSW	8	15,984,806 (GRCm38)	missense	probably damaging	0.99
R9127:Csmd1	UTSW	8	16,223,272 (GRCm38)	missense	probably benign	0.31
R9146:Csmd1	UTSW	8	15,998,832 (GRCm38)	missense	probably benign	0.00
R9198:Csmd1	UTSW	8	15,912,430 (GRCm38)	missense	probably damaging	1.00
R9285:Csmd1	UTSW	8	15,906,088 (GRCm38)	missense	probably damaging	1.00
R9303:Csmd1	UTSW	8	15,961,532 (GRCm38)	missense	probably benign	0.31
R9305:Csmd1	UTSW	8	15,961,532 (GRCm38)	missense	probably benign	0.31
R9326:Csmd1	UTSW	8	15,999,803 (GRCm38)	missense	probably benign	0.21
R9356:Csmd1	UTSW	8	16,202,055 (GRCm38)	missense	probably damaging	1.00
R9385:Csmd1	UTSW	8	15,984,756 (GRCm38)	missense	probably benign	0.19
R9444:Csmd1	UTSW	8	16,158,236 (GRCm38)	missense	probably benign	0.30
R9476:Csmd1	UTSW	8	15,931,215 (GRCm38)	critical splice acceptor site	probably null
R9506:Csmd1	UTSW	8	16,200,009 (GRCm38)	missense	probably damaging	1.00
R9614:Csmd1	UTSW	8	16,158,225 (GRCm38)	missense	probably benign	0.00
R9668:Csmd1	UTSW	8	16,211,758 (GRCm38)	missense	probably benign	0.00
X0011:Csmd1	UTSW	8	16,196,263 (GRCm38)	missense	probably damaging	1.00
X0021:Csmd1	UTSW	8	16,185,256 (GRCm38)	missense	probably damaging	1.00
X0024:Csmd1	UTSW	8	16,037,218 (GRCm38)	missense	probably damaging	0.99
X0028:Csmd1	UTSW	8	15,915,333 (GRCm38)	missense	possibly damaging	0.79
Z1088:Csmd1	UTSW	8	16,189,978 (GRCm38)	missense	possibly damaging	0.50
Z1088:Csmd1	UTSW	8	16,092,258 (GRCm38)	missense	probably damaging	1.00
Z1088:Csmd1	UTSW	8	15,921,875 (GRCm38)	missense	possibly damaging	0.91
Z1088:Csmd1	UTSW	8	16,346,617 (GRCm38)	missense	probably damaging	0.99
Z1088:Csmd1	UTSW	8	16,200,058 (GRCm38)	missense	probably damaging	0.97
Z1176:Csmd1	UTSW	8	16,037,198 (GRCm38)	missense	probably damaging	1.00
Z1176:Csmd1	UTSW	8	15,998,814 (GRCm38)	missense	probably damaging	1.00
Z1177:Csmd1	UTSW	8	16,200,019 (GRCm38)	missense	probably damaging	1.00
Z1177:Csmd1	UTSW	8	15,984,708 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GACTCGGTCATGGTTGAGAAG -3'
(R):5'- CTGCTGAGAATGCATGGAGAC -3'

Sequencing Primer
(F):5'- CTCGGTCATGGTTGAGAAGAAATTCC -3'
(R):5'- GAGGCTATGTCATTGCAGTTAGAATC -3'

Posted On

2019-10-07