Mutagenetix > Incidental Mutation

Incidental Mutation 'R7653:Vmn2r120'

580516

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r120

Ensembl Gene

ENSMUSG00000090655

Gene Name

vomeronasal 2, receptor 120

Synonyms

EG224916

MMRRC Submission

Accession Numbers

Genbank: NM_001104591; MGI: 3644483

Is this an essential gene?

Probably non essential (E-score: 0.096) question?

Stock #

R7653 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

57508783-57545314 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 57509258 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Aspartic acid at position 699 (V699D)

Ref Sequence

ENSEMBL: ENSMUSP00000129296 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000165781]

AlphaFold

A0A3Q4EG79

Predicted Effect

possibly damaging
Transcript: ENSMUST00000165781
AA Change: V699D

PolyPhen 2 Score 0.926 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000129296
Gene: ENSMUSG00000090655
AA Change: V699D

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:ANF_receptor	80	474	5.9e-42	PFAM
Pfam:NCD3G	517	570	7.5e-22	PFAM
Pfam:7tm_3	598	836	1.3e-54	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A730049H05Rik	A	T	6: 92,828,069	Q70L	unknown	Het
Adamts12	T	A	15: 11,257,029	N489K	probably benign	Het
Alms1	A	G	6: 85,620,595	D801G	possibly damaging	Het
Apex1	T	G	14: 50,926,538	N173K	probably damaging	Het
Arhgap32	A	T	9: 32,257,145	N808I	probably benign	Het
Arhgef28	T	C	13: 97,969,313	Y706C	probably benign	Het
Atg2b	A	T	12: 105,636,472	F1604Y	possibly damaging	Het
Atm	A	T	9: 53,490,302	Y1422*	probably null	Het
Bace2	T	A	16: 97,436,652	V38E		Het
BC053393	A	C	11: 46,584,373	S132R	probably benign	Het
Birc6	C	A	17: 74,647,734	L3442I	possibly damaging	Het
C6	T	A	15: 4,814,762	S889T		Het
Calcrl	A	T	2: 84,345,185	L275*	probably null	Het
Casp6	T	C	3: 129,912,223	Y180H	probably benign	Het
Cd5	T	C	19: 10,726,546	M51V	probably benign	Het
Cdhr1	G	T	14: 37,082,201	P500Q	probably benign	Het
Celsr3	G	A	9: 108,835,070	W1732*	probably null	Het
Ces2g	T	C	8: 104,962,653	V87A	probably damaging	Het
Chil6	T	C	3: 106,394,325	N153S	possibly damaging	Het
Chrna5	A	T	9: 55,002,434	D113V	probably benign	Het
Cox20	A	G	1: 178,322,599	T113A	probably benign	Het
Cryl1	T	C	14: 57,303,691	I179V	probably benign	Het
Dennd3	A	G	15: 73,562,426	T982A	probably damaging	Het
Drosha	G	A	15: 12,859,436	V577I	probably benign	Het
Dync2h1	A	G	9: 7,117,570	S2240P	probably benign	Het
Fam166b	T	G	4: 43,427,273		probably null	Het
Fbxl5	C	T	5: 43,758,774	S432N	probably benign	Het
Fez1	T	A	9: 36,860,850	S150R	probably benign	Het
Gabrb2	T	G	11: 42,487,212	M85R	probably damaging	Het
Gm2035	T	A	12: 87,919,478	D127V	unknown	Het
Lhx4	A	G	1: 155,704,871	V203A	probably damaging	Het
Med23	G	A	10: 24,904,384	D977N	probably damaging	Het
Mplkip	T	C	13: 17,695,782	F100L	probably damaging	Het
Ncoa7	C	T	10: 30,694,243	G240E	probably damaging	Het
Nedd4	A	G	9: 72,743,628	E827G	probably damaging	Het
Nfatc2	A	G	2: 168,571,145	F207L	probably benign	Het
Nr2f1	A	T	13: 78,195,597	S183T	probably benign	Het
Ocel1	A	G	8: 71,371,916	E81G	probably benign	Het
Olfr1513	C	A	14: 52,349,432	G205*	probably null	Het
Olfr432	T	C	1: 174,050,922	V183A	probably benign	Het
Olfr733	C	T	14: 50,299,147	G54E	possibly damaging	Het
Pcdh8	G	A	14: 79,767,646	P980S	probably benign	Het
Pex26	A	T	6: 121,193,551	Q285L	possibly damaging	Het
Plce1	A	T	19: 38,749,319	N1603I	probably benign	Het
Poli	A	T	18: 70,509,627	C501S	probably benign	Het
Ppp4r4	C	T	12: 103,584,145	T276I	probably damaging	Het
Rbpj	T	A	5: 53,590,351	M1K	probably null	Het
Recql4	T	A	15: 76,703,782	M1204L	probably benign	Het
Ribc2	T	C	15: 85,141,675	I284T	probably benign	Het
Rreb1	C	A	13: 37,930,386	Q574K	probably benign	Het
Scn9a	A	T	2: 66,527,080	L959Q	probably damaging	Het
Shank1	C	A	7: 44,319,669	H329Q	unknown	Het
Soat2	A	T	15: 102,162,578	D469V	probably damaging	Het
Spag7	T	A	11: 70,664,865	H82L	probably damaging	Het
Sptb	T	C	12: 76,628,497	I248V	probably benign	Het
Tacr3	A	G	3: 134,861,082	I239V	probably benign	Het
Tbc1d1	T	C	5: 64,256,790	F165L	probably benign	Het
Tchhl1	A	G	3: 93,471,144	E385G	probably benign	Het
Tecta	C	T	9: 42,337,236	D1957N	probably damaging	Het
Tenm2	T	C	11: 36,047,347	I1501V	probably benign	Het
Tet2	G	T	3: 133,486,385	Q763K	probably benign	Het
Tmem8	T	A	17: 26,120,449	M579K	probably damaging	Het
Tox3	G	A	8: 90,248,989	T338I	probably damaging	Het
Usp30	G	A	5: 114,121,669	D479N	probably damaging	Het
Vmn1r27	T	C	6: 58,215,800	D73G	possibly damaging	Het
Vmn1r27	A	T	6: 58,215,894	S42T	probably benign	Het
Vwa2	A	T	19: 56,909,335	T691S	probably benign	Het
Wdr31	T	A	4: 62,463,429	Q55L	probably benign	Het
Xdh	A	G	17: 73,897,045	F1107L	probably benign	Het
Zfp184	A	G	13: 21,959,717	H531R	probably damaging	Het
Zfp366	T	C	13: 99,229,201	L290P	probably damaging	Het

Other mutations in Vmn2r120

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01335:Vmn2r120	APN	17	57525732	missense	possibly damaging	0.86
IGL01346:Vmn2r120	APN	17	57545232	missense	probably benign	0.11
IGL01996:Vmn2r120	APN	17	57525222	missense	possibly damaging	0.92
IGL02503:Vmn2r120	APN	17	57509385	missense	probably benign	0.40
IGL02582:Vmn2r120	APN	17	57524724	missense	probably damaging	0.99
IGL02747:Vmn2r120	APN	17	57524719	missense	probably benign	0.19
IGL02896:Vmn2r120	APN	17	57509008	missense	probably damaging	1.00
IGL03139:Vmn2r120	APN	17	57524742	missense	probably benign	0.39
IGL03342:Vmn2r120	APN	17	57509372	missense	probably benign	0.03
A4554:Vmn2r120	UTSW	17	57525715	missense	probably benign	0.01
R0207:Vmn2r120	UTSW	17	57525052	missense	probably benign	0.17
R0472:Vmn2r120	UTSW	17	57524518	missense	probably benign	0.03
R0517:Vmn2r120	UTSW	17	57508949	missense	probably damaging	1.00
R1109:Vmn2r120	UTSW	17	57525829	missense	probably benign	0.09
R1316:Vmn2r120	UTSW	17	57525939	missense	probably benign	0.28
R1543:Vmn2r120	UTSW	17	57522374	missense	probably benign	0.09
R1795:Vmn2r120	UTSW	17	57525038	missense	probably benign	0.35
R1850:Vmn2r120	UTSW	17	57525826	missense	probably benign	0.19
R1920:Vmn2r120	UTSW	17	57524839	missense	probably benign	0.01
R1921:Vmn2r120	UTSW	17	57524839	missense	probably benign	0.01
R1922:Vmn2r120	UTSW	17	57524839	missense	probably benign	0.01
R2063:Vmn2r120	UTSW	17	57524553	missense	possibly damaging	0.88
R2064:Vmn2r120	UTSW	17	57524553	missense	possibly damaging	0.88
R2065:Vmn2r120	UTSW	17	57524553	missense	possibly damaging	0.88
R2067:Vmn2r120	UTSW	17	57524553	missense	possibly damaging	0.88
R2286:Vmn2r120	UTSW	17	57508958	missense	probably damaging	1.00
R2291:Vmn2r120	UTSW	17	57509479	missense	probably damaging	1.00
R3416:Vmn2r120	UTSW	17	57509241	missense	possibly damaging	0.89
R3874:Vmn2r120	UTSW	17	57524954	missense	probably benign	0.40
R4023:Vmn2r120	UTSW	17	57536718	missense	possibly damaging	0.92
R4024:Vmn2r120	UTSW	17	57536718	missense	possibly damaging	0.92
R4348:Vmn2r120	UTSW	17	57522466	missense	possibly damaging	0.47
R4409:Vmn2r120	UTSW	17	57509477	missense	probably damaging	1.00
R4610:Vmn2r120	UTSW	17	57509120	missense	probably damaging	1.00
R4771:Vmn2r120	UTSW	17	57524887	missense	probably damaging	1.00
R4786:Vmn2r120	UTSW	17	57522048	missense	probably benign	0.14
R4927:Vmn2r120	UTSW	17	57509125	missense	probably damaging	1.00
R5285:Vmn2r120	UTSW	17	57536703	missense	probably damaging	1.00
R5566:Vmn2r120	UTSW	17	57545290	missense	possibly damaging	0.95
R5578:Vmn2r120	UTSW	17	57522514	missense	probably benign	0.01
R5643:Vmn2r120	UTSW	17	57524977	missense	probably benign	0.01
R5644:Vmn2r120	UTSW	17	57524977	missense	probably benign	0.01
R5781:Vmn2r120	UTSW	17	57524938	missense	probably benign	0.00
R6084:Vmn2r120	UTSW	17	57525721	missense	probably benign	0.15
R6120:Vmn2r120	UTSW	17	57525973	missense	probably benign	0.02
R6160:Vmn2r120	UTSW	17	57509418	missense	probably benign	0.03
R6248:Vmn2r120	UTSW	17	57545287	missense	probably benign	0.03
R6256:Vmn2r120	UTSW	17	57524700	nonsense	probably null
R6730:Vmn2r120	UTSW	17	57525012	missense	probably benign	0.03
R6821:Vmn2r120	UTSW	17	57536659	missense	probably benign	0.00
R6868:Vmn2r120	UTSW	17	57545218	missense	probably benign	0.00
R6880:Vmn2r120	UTSW	17	57509187	missense	probably damaging	1.00
R6986:Vmn2r120	UTSW	17	57509340	missense	probably damaging	1.00
R7276:Vmn2r120	UTSW	17	57524881	missense	probably benign	0.11
R7373:Vmn2r120	UTSW	17	57509406	missense	probably benign	0.35
R7667:Vmn2r120	UTSW	17	57536657	missense	probably benign	0.04
R7775:Vmn2r120	UTSW	17	57525942	missense	probably damaging	1.00
R7778:Vmn2r120	UTSW	17	57525942	missense	probably damaging	1.00
R7797:Vmn2r120	UTSW	17	57508874	missense	probably damaging	1.00
R7824:Vmn2r120	UTSW	17	57525942	missense	probably damaging	1.00
R7902:Vmn2r120	UTSW	17	57509244	missense	possibly damaging	0.87
R7922:Vmn2r120	UTSW	17	57524683	missense	probably damaging	0.99
R8508:Vmn2r120	UTSW	17	57525843	missense	probably benign	0.03
R8847:Vmn2r120	UTSW	17	57509217	missense	probably benign	0.01
R8882:Vmn2r120	UTSW	17	57545229	missense	probably benign	0.01
R9134:Vmn2r120	UTSW	17	57525093	missense	probably damaging	1.00
R9161:Vmn2r120	UTSW	17	57524864	missense
R9336:Vmn2r120	UTSW	17	57525201	missense	possibly damaging	0.91
RF005:Vmn2r120	UTSW	17	57521991	missense	possibly damaging	0.65
Z1177:Vmn2r120	UTSW	17	57509245	missense	probably benign	0.00
Z1188:Vmn2r120	UTSW	17	57522436	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AAGCCTAGGTATCCCAGCAC -3'
(R):5'- ATTGTGAAAGCCAATAACCGC -3'

Sequencing Primer
(F):5'- TAGGTATCCCAGCACACAGTAAAAGG -3'
(R):5'- GCACTCTCAGCTACATCCTG -3'

Posted On

2019-10-07