Mutagenetix > Incidental Mutation

Incidental Mutation 'R7334:Elmod1'

580613

Institutional Source

Beutler Lab

Gene Symbol

Elmod1

Ensembl Gene

ENSMUSG00000041986

Gene Name

ELMO/CED-12 domain containing 1

Synonyms

MMRRC Submission

045371-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7334 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

53818741-53882585 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 53841508 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000129082 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000048409] [ENSMUST00000166580]

AlphaFold

Q3V1U8

Predicted Effect

probably null
Transcript: ENSMUST00000048409

SMART Domains

Protein: ENSMUSP00000046191
Gene: ENSMUSG00000041986

Domain	Start	End	E-Value	Type
Pfam:ELMO_CED12	117	295	3.8e-49	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000166580

SMART Domains

Protein: ENSMUSP00000129082
Gene: ENSMUSG00000041986

Domain	Start	End	E-Value	Type
Pfam:ELMO_CED12	114	296	9.6e-53	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

99% (75/76)

MGI Phenotype

PHENOTYPE: Mice homozygous for a spontaneous allele exhibit circling, absent startle reflex, deafness, organ of Corti degeneration and abnormal cochlear hair stereociliary bundle. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl2fm3	T	A	3: 59,776,380 (GRCm39)	C184S	probably damaging	Het
Acadm	G	T	3: 153,644,698 (GRCm39)	S9*	probably null	Het
Acot10	C	T	15: 20,665,629 (GRCm39)	V371I	possibly damaging	Het
Adam8	T	C	7: 139,568,903 (GRCm39)	E199G	probably damaging	Het
Aldh18a1	A	T	19: 40,539,696 (GRCm39)	W762R	probably damaging	Het
Aldh1a1	T	A	19: 20,599,075 (GRCm39)	V162E	probably damaging	Het
Alms1	A	G	6: 85,618,432 (GRCm39)	D2357G	probably damaging	Het
Arfgef1	G	T	1: 10,254,685 (GRCm39)	Q718K	probably damaging	Het
Arid5b	A	C	10: 68,079,007 (GRCm39)	V110G	possibly damaging	Het
Bpifb3	T	A	2: 153,761,654 (GRCm39)	D34E	probably damaging	Het
Cacfd1	C	T	2: 26,905,558 (GRCm39)	A85V	possibly damaging	Het
Cep57l1	C	A	10: 41,597,596 (GRCm39)	S345I	probably benign	Het
Cibar2	T	C	8: 120,901,589 (GRCm39)	T39A	probably damaging	Het
Clca3b	G	A	3: 144,542,417 (GRCm39)	R462*	probably null	Het
Cyp26c1	G	A	19: 37,677,323 (GRCm39)	V251I	probably benign	Het
Dip2a	A	G	10: 76,110,080 (GRCm39)	S1179P	possibly damaging	Het
Dnal1	T	C	12: 84,173,780 (GRCm39)	L27P	probably damaging	Het
Dock7	A	G	4: 98,864,180 (GRCm39)	V1288A	unknown	Het
Epb41l5	T	G	1: 119,551,679 (GRCm39)	K102T	probably damaging	Het
Fermt3	T	C	19: 6,980,406 (GRCm39)	I358V	probably benign	Het
Frmd3	A	G	4: 74,079,955 (GRCm39)	I316V	probably benign	Het
Fryl	T	C	5: 73,204,839 (GRCm39)		probably null	Het
Gm4131	T	A	14: 62,702,356 (GRCm39)	H204L	possibly damaging	Het
Hmcn2	G	A	2: 31,325,806 (GRCm39)	G4278R	probably damaging	Het
Hmcn2	A	G	2: 31,343,147 (GRCm39)	S4558G	possibly damaging	Het
Igkv1-132	A	G	6: 67,737,108 (GRCm39)	T25A	probably benign	Het
Kcp	T	C	6: 29,485,511 (GRCm39)	E1161G	probably damaging	Het
Macf1	A	T	4: 123,293,235 (GRCm39)	I5371K	probably damaging	Het
Malrd1	T	A	2: 16,011,529 (GRCm39)	C1670S	probably damaging	Het
Mfsd13a	T	A	19: 46,356,809 (GRCm39)	V270E	probably damaging	Het
Mroh1	A	G	15: 76,311,838 (GRCm39)	I524V	probably benign	Het
Mta1	T	C	12: 113,090,418 (GRCm39)	S175P	possibly damaging	Het
Myo7a	C	T	7: 97,728,573 (GRCm39)	R800H	probably benign	Het
Ncald	T	A	15: 37,397,524 (GRCm39)	Y52F	probably damaging	Het
Nherf1	C	T	11: 115,054,593 (GRCm39)	A81V	possibly damaging	Het
Nomo1	T	C	7: 45,732,692 (GRCm39)	S1152P	probably damaging	Het
Nr3c1	A	G	18: 39,620,090 (GRCm39)	F66L	probably benign	Het
Nrf1	T	C	6: 30,118,970 (GRCm39)	L363S	probably benign	Het
Or4n4	C	A	14: 50,519,036 (GRCm39)	V225F	probably benign	Het
Or8b12b	A	T	9: 37,684,293 (GRCm39)	I113F	probably damaging	Het
Osbpl3	A	G	6: 50,321,886 (GRCm39)	M300T	possibly damaging	Het
Parpbp	T	A	10: 87,947,617 (GRCm39)	N339I	probably damaging	Het
Pdlim5	A	T	3: 141,950,678 (GRCm39)	H578Q	probably damaging	Het
Pear1	T	C	3: 87,657,532 (GRCm39)	N1009S	probably damaging	Het
Pnpla8	A	G	12: 44,358,286 (GRCm39)	I745M	probably damaging	Het
Pom121l12	C	A	11: 14,549,681 (GRCm39)	T129K	probably damaging	Het
Ppp1r14a	T	C	7: 28,992,687 (GRCm39)	S130P	probably damaging	Het
Prss12	A	C	3: 123,280,780 (GRCm39)	L488F	probably benign	Het
Psd3	C	T	8: 68,361,357 (GRCm39)	V559I	possibly damaging	Het
Rrh	T	C	3: 129,602,631 (GRCm39)	T364A	probably benign	Het
Shcbp1	A	T	8: 4,791,876 (GRCm39)	M479K	probably damaging	Het
Shcbp1	A	C	8: 4,804,310 (GRCm39)	F200C	probably damaging	Het
Slx1b	G	T	7: 126,291,699 (GRCm39)	R122S	probably damaging	Het
Spata31f1e	G	A	4: 42,793,856 (GRCm39)	T92I	possibly damaging	Het
Spidr	A	G	16: 15,932,689 (GRCm39)		probably null	Het
St18	G	A	1: 6,872,783 (GRCm39)	D173N	probably benign	Het
Stambpl1	T	C	19: 34,204,048 (GRCm39)	I46T	probably damaging	Het
Syne1	C	T	10: 5,007,886 (GRCm39)	D113N	probably damaging	Het
Tg	G	A	15: 66,597,121 (GRCm39)	V1741I	probably benign	Het
Thsd7b	T	A	1: 130,123,012 (GRCm39)	W1544R	probably benign	Het
Tiam2	G	A	17: 3,553,283 (GRCm39)	R1120H	possibly damaging	Het
Tinag	A	T	9: 76,908,931 (GRCm39)	C337S	probably damaging	Het
Tm4sf1	G	C	3: 57,200,510 (GRCm39)	A64G	probably damaging	Het
Tmprss6	A	G	15: 78,328,017 (GRCm39)	Y572H	unknown	Het
Tnfrsf11a	G	A	1: 105,754,854 (GRCm39)	A309T	possibly damaging	Het
Txndc11	A	G	16: 10,946,425 (GRCm39)	Y129H	probably damaging	Het
Ube3b	T	C	5: 114,553,742 (GRCm39)	F974S	possibly damaging	Het
Utrn	C	A	10: 12,603,753 (GRCm39)		probably null	Het
Vmn1r58	T	A	7: 5,414,066 (GRCm39)	M55L	probably benign	Het
Vnn1	T	A	10: 23,776,658 (GRCm39)	S336R	probably benign	Het
Wwc2	T	C	8: 48,322,829 (GRCm39)	Y424C	unknown	Het
Zfp507	T	C	7: 35,475,505 (GRCm39)	I903V	probably damaging	Het
Zfp551	C	T	7: 12,150,681 (GRCm39)	G243R	probably damaging	Het
Zfp60	T	A	7: 27,448,444 (GRCm39)	C371S	probably damaging	Het

Other mutations in Elmod1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00391:Elmod1	APN	9	53,831,682 (GRCm39)	critical splice donor site	probably null
IGL01803:Elmod1	APN	9	53,838,764 (GRCm39)	missense	probably benign	0.01
IGL01966:Elmod1	APN	9	53,828,611 (GRCm39)	missense	probably benign	0.00
IGL02354:Elmod1	APN	9	53,838,842 (GRCm39)	missense	probably damaging	1.00
IGL02361:Elmod1	APN	9	53,838,842 (GRCm39)	missense	probably damaging	1.00
IGL03107:Elmod1	APN	9	53,841,507 (GRCm39)	splice site	probably benign
IGL03277:Elmod1	APN	9	53,833,272 (GRCm39)	missense	probably damaging	1.00
R0013:Elmod1	UTSW	9	53,820,185 (GRCm39)	splice site	probably benign
R0013:Elmod1	UTSW	9	53,820,185 (GRCm39)	splice site	probably benign
R0243:Elmod1	UTSW	9	53,842,831 (GRCm39)	splice site	probably benign
R0530:Elmod1	UTSW	9	53,833,260 (GRCm39)	missense	probably damaging	0.96
R0555:Elmod1	UTSW	9	53,838,876 (GRCm39)	splice site	probably benign
R0592:Elmod1	UTSW	9	53,833,390 (GRCm39)	splice site	probably benign
R0670:Elmod1	UTSW	9	53,820,106 (GRCm39)	missense	probably damaging	0.96
R1054:Elmod1	UTSW	9	53,820,058 (GRCm39)	missense	probably benign	0.02
R1195:Elmod1	UTSW	9	53,843,052 (GRCm39)	missense	probably damaging	1.00
R1195:Elmod1	UTSW	9	53,843,052 (GRCm39)	missense	probably damaging	1.00
R1195:Elmod1	UTSW	9	53,843,052 (GRCm39)	missense	probably damaging	1.00
R1875:Elmod1	UTSW	9	53,843,151 (GRCm39)	missense	probably benign	0.00
R4445:Elmod1	UTSW	9	53,841,413 (GRCm39)	missense	probably damaging	1.00
R4573:Elmod1	UTSW	9	53,833,256 (GRCm39)	missense	probably damaging	1.00
R5895:Elmod1	UTSW	9	53,843,091 (GRCm39)	missense	probably damaging	0.99
R6826:Elmod1	UTSW	9	53,826,883 (GRCm39)	missense	probably benign	0.02
R7181:Elmod1	UTSW	9	53,841,382 (GRCm39)	splice site	probably null
R7422:Elmod1	UTSW	9	53,820,127 (GRCm39)	missense	probably damaging	0.99
R7964:Elmod1	UTSW	9	53,838,860 (GRCm39)	missense	probably benign	0.00
R8511:Elmod1	UTSW	9	53,820,095 (GRCm39)	missense	probably damaging	1.00
R9335:Elmod1	UTSW	9	53,843,116 (GRCm39)	missense	probably benign	0.01
R9362:Elmod1	UTSW	9	53,833,304 (GRCm39)	missense	possibly damaging	0.80
Z1088:Elmod1	UTSW	9	53,826,898 (GRCm39)	missense	probably benign	0.00
Z1176:Elmod1	UTSW	9	53,854,144 (GRCm39)	missense	probably benign	0.22

Predicted Primers

PCR Primer
(F):5'- TTACGAACATGAAGAGCCCC -3'
(R):5'- CGTAACCAGGAAAATGGCGC -3'

Sequencing Primer
(F):5'- TCTGAAATTCAAAACACTACAGATGG -3'
(R):5'- AGGAAAATGGCGCCCCCTAG -3'

Posted On

2019-10-14