Mutagenetix > Incidental Mutation

Incidental Mutation 'R7490:Orai3'

580678

Institutional Source

Beutler Lab

Gene Symbol

Orai3

Ensembl Gene

ENSMUSG00000043964

Gene Name

ORAI calcium release-activated calcium modulator 3

Synonyms

Tmem142c

MMRRC Submission

045564-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.162) question?

Stock #

R7490 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

127368987-127374322 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 127372799 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Valine at position 100 (A100V)

Ref Sequence

ENSEMBL: ENSMUSP00000050279 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033081] [ENSMUST00000047075] [ENSMUST00000047157] [ENSMUST00000061587] [ENSMUST00000118865] [ENSMUST00000121504] [ENSMUST00000126761] [ENSMUST00000143951] [ENSMUST00000144406] [ENSMUST00000186116] [ENSMUST00000186207] [ENSMUST00000188580] [ENSMUST00000206893]

AlphaFold

Q6P8G8

Predicted Effect

probably benign
Transcript: ENSMUST00000033081

SMART Domains

Protein: ENSMUSP00000033081
Gene: ENSMUSG00000030811

Domain	Start	End	E-Value	Type
Pfam:zf-CXXC	11	57	1.7e-16	PFAM
PHD	67	129	4e-4	SMART
low complexity region	166	183	N/A	INTRINSIC
low complexity region	302	325	N/A	INTRINSIC
low complexity region	355	377	N/A	INTRINSIC
FBOX	404	444	4.6e-4	SMART
low complexity region	509	520	N/A	INTRINSIC
LRR	576	601	3.58e1	SMART
LRR	631	656	1.28e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000047075

SMART Domains

Protein: ENSMUSP00000047672
Gene: ENSMUSG00000042308

Domain	Start	End	E-Value	Type
RRM	95	168	7.6e-6	SMART
low complexity region	209	242	N/A	INTRINSIC
low complexity region	278	295	N/A	INTRINSIC
low complexity region	315	357	N/A	INTRINSIC
low complexity region	427	487	N/A	INTRINSIC
Blast:SET	488	976	N/A	BLAST
low complexity region	977	1007	N/A	INTRINSIC
low complexity region	1015	1079	N/A	INTRINSIC
low complexity region	1087	1098	N/A	INTRINSIC
low complexity region	1122	1152	N/A	INTRINSIC
low complexity region	1157	1173	N/A	INTRINSIC
Blast:SET	1193	1310	2e-24	BLAST
low complexity region	1311	1368	N/A	INTRINSIC
low complexity region	1369	1396	N/A	INTRINSIC
N-SET	1428	1567	6.75e-64	SMART
SET	1577	1700	3.22e-35	SMART
PostSET	1700	1716	1.16e-4	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000047157

SMART Domains

Protein: ENSMUSP00000037600
Gene: ENSMUSG00000042308

Domain	Start	End	E-Value	Type
RRM	95	168	7.6e-6	SMART
low complexity region	209	242	N/A	INTRINSIC
low complexity region	278	295	N/A	INTRINSIC
low complexity region	315	357	N/A	INTRINSIC
low complexity region	427	487	N/A	INTRINSIC
Blast:SET	488	976	N/A	BLAST
low complexity region	977	1007	N/A	INTRINSIC
low complexity region	1015	1079	N/A	INTRINSIC
low complexity region	1087	1098	N/A	INTRINSIC
low complexity region	1122	1152	N/A	INTRINSIC
low complexity region	1157	1173	N/A	INTRINSIC
Blast:SET	1193	1310	2e-24	BLAST
low complexity region	1311	1368	N/A	INTRINSIC
low complexity region	1369	1396	N/A	INTRINSIC
N-SET	1428	1567	6.75e-64	SMART
SET	1577	1700	3.22e-35	SMART
PostSET	1700	1716	1.16e-4	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000061587
AA Change: A100V

PolyPhen 2 Score 0.529 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000050279
Gene: ENSMUSG00000043964
AA Change: A100V

Domain	Start	End	E-Value	Type
Pfam:Orai-1	46	271	1.3e-70	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000118865
AA Change: A100V

PolyPhen 2 Score 0.062 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000112382
Gene: ENSMUSG00000043964
AA Change: A100V

Domain	Start	End	E-Value	Type
Pfam:Orai-1	42	165	1.5e-62	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000121504

SMART Domains

Protein: ENSMUSP00000113142
Gene: ENSMUSG00000043964

Domain	Start	End	E-Value	Type
Pfam:Orai-1	42	94	1.3e-16	PFAM
low complexity region	125	133	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000126761

SMART Domains

Protein: ENSMUSP00000120666
Gene: ENSMUSG00000042308

Domain	Start	End	E-Value	Type
RRM	95	168	7.6e-6	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000143951

Predicted Effect

probably benign
Transcript: ENSMUST00000144406

SMART Domains

Protein: ENSMUSP00000115248
Gene: ENSMUSG00000042308

Domain	Start	End	E-Value	Type
RRM	95	168	7.6e-6	SMART
low complexity region	209	242	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000186116

SMART Domains

Protein: ENSMUSP00000140083
Gene: ENSMUSG00000030811

Domain	Start	End	E-Value	Type
low complexity region	10	33	N/A	INTRINSIC
low complexity region	63	85	N/A	INTRINSIC
FBOX	112	152	3e-6	SMART
low complexity region	217	228	N/A	INTRINSIC
LRR	284	309	1.5e-1	SMART
LRR	339	364	5.3e-6	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000186207

SMART Domains

Protein: ENSMUSP00000140303
Gene: ENSMUSG00000030811

Domain	Start	End	E-Value	Type
Pfam:zf-CXXC	11	57	1.7e-16	PFAM
PHD	67	129	4e-4	SMART
low complexity region	166	183	N/A	INTRINSIC
low complexity region	302	325	N/A	INTRINSIC
low complexity region	355	377	N/A	INTRINSIC
FBOX	404	444	4.6e-4	SMART
low complexity region	509	520	N/A	INTRINSIC
LRR	576	601	3.58e1	SMART
LRR	631	656	1.28e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000188580

SMART Domains

Protein: ENSMUSP00000140021
Gene: ENSMUSG00000030811

Domain	Start	End	E-Value	Type
Pfam:zf-CXXC	11	57	1.3e-16	PFAM
PHD	67	129	4e-4	SMART
low complexity region	186	209	N/A	INTRINSIC
low complexity region	239	261	N/A	INTRINSIC
FBOX	288	328	4.6e-4	SMART
low complexity region	393	404	N/A	INTRINSIC
LRR	460	485	3.58e1	SMART
LRR	515	540	1.28e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000206893

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700019A02Rik	T	C	1: 53,202,389 (GRCm39)	D132G	possibly damaging	Het
Abca5	T	C	11: 110,168,437 (GRCm39)	E1424G	possibly damaging	Het
Adamts4	C	T	1: 171,084,169 (GRCm39)	Q549*	probably null	Het
Adcy4	A	G	14: 56,007,890 (GRCm39)	I893T	possibly damaging	Het
Ago1	A	T	4: 126,333,298 (GRCm39)	*858R	probably null	Het
Ank2	T	A	3: 126,752,538 (GRCm39)	I393L	probably damaging	Het
Ankrd44	T	C	1: 54,687,459 (GRCm39)	T987A	probably benign	Het
Ap2a1	G	T	7: 44,552,213 (GRCm39)	N790K	probably benign	Het
Aqr	A	G	2: 113,989,349 (GRCm39)		probably null	Het
Arel1	G	T	12: 84,988,685 (GRCm39)	F21L	probably damaging	Het
Atp1a3	T	C	7: 24,686,895 (GRCm39)	D743G	probably damaging	Het
Atp9a	A	T	2: 168,517,272 (GRCm39)	F354I	probably benign	Het
Bag6	A	G	17: 35,359,818 (GRCm39)	H259R	unknown	Het
BC028528	CTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTT	CTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTT	3: 95,795,448 (GRCm39)		probably benign	Het
BC028528	TGGTT	TGGTTCTGTGGTCACGGGTT	3: 95,795,498 (GRCm39)		probably benign	Het
BC028528	GTCACTGGTTCTGTG	GTCACTGGTTCTGTGTTCACTGGTTCTGTG	3: 95,795,478 (GRCm39)		probably benign	Het
Bckdk	T	A	7: 127,504,145 (GRCm39)	S15T	unknown	Het
C4b	G	T	17: 34,950,054 (GRCm39)	Y1405*	probably null	Het
Camk4	G	A	18: 33,072,598 (GRCm39)		probably null	Het
Car11	T	A	7: 45,349,742 (GRCm39)	W16R	probably benign	Het
Ccdc80	A	C	16: 44,916,763 (GRCm39)	E506D	probably damaging	Het
Chmp6	C	T	11: 119,806,269 (GRCm39)	Q32*	probably null	Het
Colq	G	A	14: 31,267,043 (GRCm39)	P166S	possibly damaging	Het
Ctxn3	T	C	18: 57,610,357 (GRCm39)	M58T	probably damaging	Het
Cxcl3	A	T	5: 90,934,516 (GRCm39)	I93L	unknown	Het
Dnaaf2	T	C	12: 69,244,380 (GRCm39)	Y227C	probably damaging	Het
Dner	CGCTGCTGCTGCTGCTGCTGCTGCTGC	CGCTGCTGCTGCTGCTGCTGCTGC	1: 84,563,270 (GRCm39)		probably benign	Het
Dnmt3a	G	A	12: 3,954,204 (GRCm39)	G792D	probably damaging	Het
Dsg4	T	A	18: 20,584,993 (GRCm39)		probably null	Het
Ecm2	C	T	13: 49,683,818 (GRCm39)	Q599*	probably null	Het
Fbxl13	T	A	5: 21,728,058 (GRCm39)	R550*	probably null	Het
Gm4302	A	T	10: 100,177,445 (GRCm39)	Q243L	unknown	Het
Gm7168	A	T	17: 14,169,275 (GRCm39)	Y214F	probably benign	Het
Gtf3c1	C	T	7: 125,246,663 (GRCm39)	D1549N	probably damaging	Het
Gtf3c5	A	T	2: 28,461,153 (GRCm39)	D320E	probably damaging	Het
Hivep1	T	A	13: 42,311,126 (GRCm39)	V1122D	probably damaging	Het
Ibtk	T	C	9: 85,600,987 (GRCm39)		probably null	Het
Irs1	T	A	1: 82,264,985 (GRCm39)	Q1077L	probably damaging	Het
Ivd	A	T	2: 118,707,373 (GRCm39)	M296L	possibly damaging	Het
Katnal1	T	C	5: 148,828,492 (GRCm39)	D318G	probably null	Het
L3mbtl3	C	T	10: 26,215,129 (GRCm39)	V194I	unknown	Het
Malt1	C	A	18: 65,581,282 (GRCm39)	Q237K	probably benign	Het
Marchf11	C	T	15: 26,311,187 (GRCm39)	A221V	possibly damaging	Het
Nfe2l3	A	G	6: 51,434,524 (GRCm39)	I361M	possibly damaging	Het
Nrg1	G	A	8: 32,308,682 (GRCm39)	R493C	probably damaging	Het
Oga	G	A	19: 45,755,886 (GRCm39)	R586*	probably null	Het
Or10g9b	T	A	9: 39,917,720 (GRCm39)	H175L	probably damaging	Het
Or2f1	T	C	6: 42,721,739 (GRCm39)	I256T	probably damaging	Het
Or4c107	A	C	2: 88,789,392 (GRCm39)	Y194S	probably benign	Het
Or51g2	G	A	7: 102,623,017 (GRCm39)	P61S	probably damaging	Het
Or5ar1	A	T	2: 85,671,307 (GRCm39)	V276E	probably damaging	Het
Or7g16	A	T	9: 18,727,229 (GRCm39)	Y120*	probably null	Het
Oxsm	T	A	14: 16,241,066 (GRCm38)	M328L	probably benign	Het
Pan2	T	C	10: 128,144,309 (GRCm39)	V186A	probably benign	Het
Pkd1l1	T	A	11: 8,866,265 (GRCm39)	D980V		Het
Ppp1r16b	T	C	2: 158,603,388 (GRCm39)	Y438H	probably damaging	Het
Ppp4c	A	T	7: 126,386,504 (GRCm39)	H164Q	probably damaging	Het
Prl8a2	C	A	13: 27,536,753 (GRCm39)	T125K	possibly damaging	Het
Rasa2	T	C	9: 96,448,175 (GRCm39)	N494S	possibly damaging	Het
Rpl18a	T	C	8: 71,348,150 (GRCm39)	D147G	probably benign	Het
Scg3	T	C	9: 75,576,559 (GRCm39)	D272G	possibly damaging	Het
Serpinb6c	T	A	13: 34,077,818 (GRCm39)	D184V	probably benign	Het
Simc1	T	G	13: 54,672,162 (GRCm39)	L170R	possibly damaging	Het
Slx4	T	C	16: 3,797,995 (GRCm39)	E1463G	possibly damaging	Het
Stk31	T	A	6: 49,416,166 (GRCm39)		probably null	Het
Tas1r3	A	G	4: 155,946,480 (GRCm39)	I375T	probably damaging	Het
Tbc1d24	T	C	17: 24,401,494 (GRCm39)	D405G	probably damaging	Het
Tcerg1l	G	A	7: 137,861,557 (GRCm39)	P391S	probably damaging	Het
Tiam1	T	C	16: 89,695,083 (GRCm39)	S125G	probably benign	Het
Trim16	C	A	11: 62,724,949 (GRCm39)	H246N	probably damaging	Het
Tti1	T	A	2: 157,837,392 (GRCm39)	N896I	probably damaging	Het
Ubash3a	A	G	17: 31,451,286 (GRCm39)	N395S	probably damaging	Het
Uggt1	T	C	1: 36,203,589 (GRCm39)	I1014V	probably benign	Het
Vmn1r30	T	A	6: 58,412,214 (GRCm39)	Q206L	possibly damaging	Het
Washc5	T	A	15: 59,209,053 (GRCm39)	N1057I	probably benign	Het
Xpo4	GGTATTAGCGGAGT	GGT	14: 57,840,078 (GRCm39)		probably null	Het
Zcchc14	A	T	8: 122,331,756 (GRCm39)	S536T	unknown	Het

Other mutations in Orai3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02378:Orai3	APN	7	127,369,333 (GRCm39)	missense	probably damaging	1.00
IGL03105:Orai3	APN	7	127,372,725 (GRCm39)	unclassified	probably benign
R1493:Orai3	UTSW	7	127,373,077 (GRCm39)	missense	possibly damaging	0.69
R4795:Orai3	UTSW	7	127,373,060 (GRCm39)	missense	probably benign	0.03
R4973:Orai3	UTSW	7	127,373,348 (GRCm39)	missense	probably damaging	1.00
R6053:Orai3	UTSW	7	127,373,050 (GRCm39)	missense	probably benign	0.00
R6684:Orai3	UTSW	7	127,372,892 (GRCm39)	missense	probably damaging	1.00
R7651:Orai3	UTSW	7	127,373,236 (GRCm39)	missense	probably damaging	0.97
R7762:Orai3	UTSW	7	127,372,743 (GRCm39)	missense	unknown
R9269:Orai3	UTSW	7	127,373,194 (GRCm39)	missense	probably benign
R9584:Orai3	UTSW	7	127,373,177 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- AGCTGAGTATCTTCTATGCTCTAAG -3'
(R):5'- TGGGCACAAACTTGACCCAG -3'

Sequencing Primer
(F):5'- GCTCTAAGTTTTAGGATGTTGTAGTC -3'
(R):5'- CTTCAGCCAGGAAGAGAAAGGTACC -3'

Posted On

2019-10-17