Incidental Mutation 'R7490:Tiam1'
ID 580712
Institutional Source Beutler Lab
Gene Symbol Tiam1
Ensembl Gene ENSMUSG00000002489
Gene Name T cell lymphoma invasion and metastasis 1
Synonyms D16Ium10, D16Ium10e
MMRRC Submission 045564-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R7490 (G1)
Quality Score 225.009
Status Not validated
Chromosome 16
Chromosomal Location 89583999-89940657 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 89695083 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Glycine at position 125 (S125G)
Ref Sequence ENSEMBL: ENSMUSP00000002588 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000002588] [ENSMUST00000114124] [ENSMUST00000163370]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000002588
AA Change: S125G

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
SMART Domains Protein: ENSMUSP00000002588
Gene: ENSMUSG00000002489
AA Change: S125G

DomainStartEndE-ValueType
low complexity region 52 67 N/A INTRINSIC
low complexity region 178 189 N/A INTRINSIC
low complexity region 367 377 N/A INTRINSIC
PH 434 549 1.32e-13 SMART
low complexity region 573 586 N/A INTRINSIC
low complexity region 683 695 N/A INTRINSIC
RBD 765 832 1.76e-22 SMART
PDZ 856 928 1.15e-5 SMART
low complexity region 1013 1028 N/A INTRINSIC
RhoGEF 1044 1233 1.42e-63 SMART
PH 1262 1397 9.58e-2 SMART
low complexity region 1445 1454 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000114124
AA Change: S125G
SMART Domains Protein: ENSMUSP00000109759
Gene: ENSMUSG00000002489
AA Change: S125G

DomainStartEndE-ValueType
low complexity region 52 67 N/A INTRINSIC
low complexity region 178 189 N/A INTRINSIC
low complexity region 367 377 N/A INTRINSIC
PH 434 549 1.32e-13 SMART
low complexity region 573 586 N/A INTRINSIC
low complexity region 683 695 N/A INTRINSIC
RBD 765 832 1.76e-22 SMART
PDZ 856 928 1.15e-5 SMART
low complexity region 1013 1028 N/A INTRINSIC
RhoGEF 1044 1233 1.42e-63 SMART
PH 1262 1397 9.58e-2 SMART
low complexity region 1445 1454 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000163370
AA Change: S125G

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
SMART Domains Protein: ENSMUSP00000132137
Gene: ENSMUSG00000002489
AA Change: S125G

DomainStartEndE-ValueType
low complexity region 52 67 N/A INTRINSIC
low complexity region 178 189 N/A INTRINSIC
low complexity region 367 377 N/A INTRINSIC
PH 434 549 1.32e-13 SMART
low complexity region 573 586 N/A INTRINSIC
low complexity region 683 695 N/A INTRINSIC
RBD 765 832 1.76e-22 SMART
PDZ 856 928 1.15e-5 SMART
low complexity region 1013 1028 N/A INTRINSIC
RhoGEF 1044 1233 1.42e-63 SMART
PH 1262 1397 9.58e-2 SMART
low complexity region 1445 1454 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.8%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a targeted null allele display resistance to chemically-induced tumors, however, tumors that do develop progress to malignancy. Mice homozygous for a gene trap allele display anencephaly, exencephaly and/or neural tube defects. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 77 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700019A02Rik T C 1: 53,202,389 (GRCm39) D132G possibly damaging Het
Abca5 T C 11: 110,168,437 (GRCm39) E1424G possibly damaging Het
Adamts4 C T 1: 171,084,169 (GRCm39) Q549* probably null Het
Adcy4 A G 14: 56,007,890 (GRCm39) I893T possibly damaging Het
Ago1 A T 4: 126,333,298 (GRCm39) *858R probably null Het
Ank2 T A 3: 126,752,538 (GRCm39) I393L probably damaging Het
Ankrd44 T C 1: 54,687,459 (GRCm39) T987A probably benign Het
Ap2a1 G T 7: 44,552,213 (GRCm39) N790K probably benign Het
Aqr A G 2: 113,989,349 (GRCm39) probably null Het
Arel1 G T 12: 84,988,685 (GRCm39) F21L probably damaging Het
Atp1a3 T C 7: 24,686,895 (GRCm39) D743G probably damaging Het
Atp9a A T 2: 168,517,272 (GRCm39) F354I probably benign Het
Bag6 A G 17: 35,359,818 (GRCm39) H259R unknown Het
BC028528 CTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTT CTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTTCTGTGGTCACTGGTT 3: 95,795,448 (GRCm39) probably benign Het
BC028528 TGGTT TGGTTCTGTGGTCACGGGTT 3: 95,795,498 (GRCm39) probably benign Het
BC028528 GTCACTGGTTCTGTG GTCACTGGTTCTGTGTTCACTGGTTCTGTG 3: 95,795,478 (GRCm39) probably benign Het
Bckdk T A 7: 127,504,145 (GRCm39) S15T unknown Het
C4b G T 17: 34,950,054 (GRCm39) Y1405* probably null Het
Camk4 G A 18: 33,072,598 (GRCm39) probably null Het
Car11 T A 7: 45,349,742 (GRCm39) W16R probably benign Het
Ccdc80 A C 16: 44,916,763 (GRCm39) E506D probably damaging Het
Chmp6 C T 11: 119,806,269 (GRCm39) Q32* probably null Het
Colq G A 14: 31,267,043 (GRCm39) P166S possibly damaging Het
Ctxn3 T C 18: 57,610,357 (GRCm39) M58T probably damaging Het
Cxcl3 A T 5: 90,934,516 (GRCm39) I93L unknown Het
Dnaaf2 T C 12: 69,244,380 (GRCm39) Y227C probably damaging Het
Dner CGCTGCTGCTGCTGCTGCTGCTGCTGC CGCTGCTGCTGCTGCTGCTGCTGC 1: 84,563,270 (GRCm39) probably benign Het
Dnmt3a G A 12: 3,954,204 (GRCm39) G792D probably damaging Het
Dsg4 T A 18: 20,584,993 (GRCm39) probably null Het
Ecm2 C T 13: 49,683,818 (GRCm39) Q599* probably null Het
Fbxl13 T A 5: 21,728,058 (GRCm39) R550* probably null Het
Gm4302 A T 10: 100,177,445 (GRCm39) Q243L unknown Het
Gm7168 A T 17: 14,169,275 (GRCm39) Y214F probably benign Het
Gtf3c1 C T 7: 125,246,663 (GRCm39) D1549N probably damaging Het
Gtf3c5 A T 2: 28,461,153 (GRCm39) D320E probably damaging Het
Hivep1 T A 13: 42,311,126 (GRCm39) V1122D probably damaging Het
Ibtk T C 9: 85,600,987 (GRCm39) probably null Het
Irs1 T A 1: 82,264,985 (GRCm39) Q1077L probably damaging Het
Ivd A T 2: 118,707,373 (GRCm39) M296L possibly damaging Het
Katnal1 T C 5: 148,828,492 (GRCm39) D318G probably null Het
L3mbtl3 C T 10: 26,215,129 (GRCm39) V194I unknown Het
Malt1 C A 18: 65,581,282 (GRCm39) Q237K probably benign Het
Marchf11 C T 15: 26,311,187 (GRCm39) A221V possibly damaging Het
Nfe2l3 A G 6: 51,434,524 (GRCm39) I361M possibly damaging Het
Nrg1 G A 8: 32,308,682 (GRCm39) R493C probably damaging Het
Oga G A 19: 45,755,886 (GRCm39) R586* probably null Het
Or10g9b T A 9: 39,917,720 (GRCm39) H175L probably damaging Het
Or2f1 T C 6: 42,721,739 (GRCm39) I256T probably damaging Het
Or4c107 A C 2: 88,789,392 (GRCm39) Y194S probably benign Het
Or51g2 G A 7: 102,623,017 (GRCm39) P61S probably damaging Het
Or5ar1 A T 2: 85,671,307 (GRCm39) V276E probably damaging Het
Or7g16 A T 9: 18,727,229 (GRCm39) Y120* probably null Het
Orai3 C T 7: 127,372,799 (GRCm39) A100V possibly damaging Het
Oxsm T A 14: 16,241,066 (GRCm38) M328L probably benign Het
Pan2 T C 10: 128,144,309 (GRCm39) V186A probably benign Het
Pkd1l1 T A 11: 8,866,265 (GRCm39) D980V Het
Ppp1r16b T C 2: 158,603,388 (GRCm39) Y438H probably damaging Het
Ppp4c A T 7: 126,386,504 (GRCm39) H164Q probably damaging Het
Prl8a2 C A 13: 27,536,753 (GRCm39) T125K possibly damaging Het
Rasa2 T C 9: 96,448,175 (GRCm39) N494S possibly damaging Het
Rpl18a T C 8: 71,348,150 (GRCm39) D147G probably benign Het
Scg3 T C 9: 75,576,559 (GRCm39) D272G possibly damaging Het
Serpinb6c T A 13: 34,077,818 (GRCm39) D184V probably benign Het
Simc1 T G 13: 54,672,162 (GRCm39) L170R possibly damaging Het
Slx4 T C 16: 3,797,995 (GRCm39) E1463G possibly damaging Het
Stk31 T A 6: 49,416,166 (GRCm39) probably null Het
Tas1r3 A G 4: 155,946,480 (GRCm39) I375T probably damaging Het
Tbc1d24 T C 17: 24,401,494 (GRCm39) D405G probably damaging Het
Tcerg1l G A 7: 137,861,557 (GRCm39) P391S probably damaging Het
Trim16 C A 11: 62,724,949 (GRCm39) H246N probably damaging Het
Tti1 T A 2: 157,837,392 (GRCm39) N896I probably damaging Het
Ubash3a A G 17: 31,451,286 (GRCm39) N395S probably damaging Het
Uggt1 T C 1: 36,203,589 (GRCm39) I1014V probably benign Het
Vmn1r30 T A 6: 58,412,214 (GRCm39) Q206L possibly damaging Het
Washc5 T A 15: 59,209,053 (GRCm39) N1057I probably benign Het
Xpo4 GGTATTAGCGGAGT GGT 14: 57,840,078 (GRCm39) probably null Het
Zcchc14 A T 8: 122,331,756 (GRCm39) S536T unknown Het
Other mutations in Tiam1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00929:Tiam1 APN 16 89,591,627 (GRCm39) missense probably damaging 1.00
IGL01356:Tiam1 APN 16 89,634,676 (GRCm39) missense probably damaging 0.99
IGL01583:Tiam1 APN 16 89,586,168 (GRCm39) missense probably damaging 1.00
IGL01626:Tiam1 APN 16 89,609,856 (GRCm39) missense probably damaging 1.00
IGL01802:Tiam1 APN 16 89,695,260 (GRCm39) missense possibly damaging 0.94
IGL01818:Tiam1 APN 16 89,664,592 (GRCm39) missense probably damaging 1.00
IGL02146:Tiam1 APN 16 89,646,569 (GRCm39) missense probably benign 0.20
IGL02329:Tiam1 APN 16 89,596,924 (GRCm39) missense probably benign 0.08
IGL02341:Tiam1 APN 16 89,695,257 (GRCm39) missense probably damaging 1.00
IGL02622:Tiam1 APN 16 89,595,588 (GRCm39) missense possibly damaging 0.59
F5770:Tiam1 UTSW 16 89,662,159 (GRCm39) missense probably damaging 1.00
PIT4515001:Tiam1 UTSW 16 89,657,130 (GRCm39) missense probably damaging 0.99
R0130:Tiam1 UTSW 16 89,694,642 (GRCm39) missense probably benign 0.01
R0143:Tiam1 UTSW 16 89,695,088 (GRCm39) missense probably benign 0.01
R0158:Tiam1 UTSW 16 89,589,889 (GRCm39) critical splice donor site probably benign
R0413:Tiam1 UTSW 16 89,606,253 (GRCm39) splice site probably benign
R0449:Tiam1 UTSW 16 89,634,715 (GRCm39) missense possibly damaging 0.75
R0520:Tiam1 UTSW 16 89,614,839 (GRCm39) splice site probably benign
R0667:Tiam1 UTSW 16 89,694,872 (GRCm39) missense probably damaging 1.00
R0787:Tiam1 UTSW 16 89,586,449 (GRCm39) missense probably damaging 1.00
R1355:Tiam1 UTSW 16 89,695,109 (GRCm39) missense probably benign 0.09
R1370:Tiam1 UTSW 16 89,695,109 (GRCm39) missense probably benign 0.09
R1534:Tiam1 UTSW 16 89,664,396 (GRCm39) critical splice donor site probably null
R1769:Tiam1 UTSW 16 89,657,167 (GRCm39) missense probably damaging 1.00
R1831:Tiam1 UTSW 16 89,657,182 (GRCm39) missense probably benign 0.01
R1913:Tiam1 UTSW 16 89,595,582 (GRCm39) missense probably damaging 1.00
R2022:Tiam1 UTSW 16 89,674,075 (GRCm39) missense probably benign
R2140:Tiam1 UTSW 16 89,646,533 (GRCm39) splice site probably benign
R2383:Tiam1 UTSW 16 89,595,572 (GRCm39) missense probably benign 0.29
R2697:Tiam1 UTSW 16 89,590,052 (GRCm39) missense probably benign 0.00
R4118:Tiam1 UTSW 16 89,673,921 (GRCm39) splice site probably null
R4327:Tiam1 UTSW 16 89,652,779 (GRCm39) missense possibly damaging 0.80
R4693:Tiam1 UTSW 16 89,640,170 (GRCm39) missense possibly damaging 0.87
R5104:Tiam1 UTSW 16 89,614,929 (GRCm39) missense probably benign 0.00
R5412:Tiam1 UTSW 16 89,681,753 (GRCm39) missense possibly damaging 0.52
R5426:Tiam1 UTSW 16 89,662,280 (GRCm39) missense possibly damaging 0.58
R5600:Tiam1 UTSW 16 89,662,253 (GRCm39) missense probably damaging 1.00
R5842:Tiam1 UTSW 16 89,652,887 (GRCm39) missense probably benign
R5986:Tiam1 UTSW 16 89,586,074 (GRCm39) missense probably benign 0.31
R6077:Tiam1 UTSW 16 89,594,918 (GRCm39) critical splice donor site probably null
R6419:Tiam1 UTSW 16 89,694,912 (GRCm39) nonsense probably null
R6525:Tiam1 UTSW 16 89,655,485 (GRCm39) critical splice donor site probably null
R6950:Tiam1 UTSW 16 89,657,092 (GRCm39) critical splice donor site probably null
R7127:Tiam1 UTSW 16 89,657,148 (GRCm39) missense probably damaging 1.00
R7197:Tiam1 UTSW 16 89,681,826 (GRCm39) missense probably damaging 1.00
R7249:Tiam1 UTSW 16 89,640,143 (GRCm39) missense probably damaging 1.00
R7825:Tiam1 UTSW 16 89,694,977 (GRCm39) missense probably benign 0.07
R8047:Tiam1 UTSW 16 89,694,672 (GRCm39) missense probably benign 0.00
R8069:Tiam1 UTSW 16 89,586,146 (GRCm39) missense probably benign
R8247:Tiam1 UTSW 16 89,695,037 (GRCm39) missense probably benign 0.26
R8490:Tiam1 UTSW 16 89,681,932 (GRCm39) missense probably damaging 0.99
R8678:Tiam1 UTSW 16 89,681,709 (GRCm39) nonsense probably null
R8690:Tiam1 UTSW 16 89,694,900 (GRCm39) missense probably damaging 1.00
R8839:Tiam1 UTSW 16 89,681,827 (GRCm39) missense probably damaging 1.00
R8857:Tiam1 UTSW 16 89,662,145 (GRCm39) missense probably damaging 0.97
R8935:Tiam1 UTSW 16 89,681,821 (GRCm39) missense probably damaging 1.00
R8972:Tiam1 UTSW 16 89,609,894 (GRCm39) missense probably damaging 1.00
R9047:Tiam1 UTSW 16 89,601,776 (GRCm39) intron probably benign
R9131:Tiam1 UTSW 16 89,657,155 (GRCm39) missense probably damaging 1.00
R9229:Tiam1 UTSW 16 89,634,719 (GRCm39) missense possibly damaging 0.94
R9383:Tiam1 UTSW 16 89,655,561 (GRCm39) missense probably damaging 1.00
R9431:Tiam1 UTSW 16 89,594,918 (GRCm39) critical splice donor site probably null
R9519:Tiam1 UTSW 16 89,608,822 (GRCm39) missense probably benign 0.06
R9567:Tiam1 UTSW 16 89,591,653 (GRCm39) missense probably damaging 1.00
R9656:Tiam1 UTSW 16 89,664,459 (GRCm39) missense probably damaging 1.00
R9714:Tiam1 UTSW 16 89,694,647 (GRCm39) missense probably benign 0.00
R9750:Tiam1 UTSW 16 89,695,394 (GRCm39) missense probably damaging 1.00
V7582:Tiam1 UTSW 16 89,662,159 (GRCm39) missense probably damaging 1.00
Z1176:Tiam1 UTSW 16 89,662,163 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GAGAATTCCAGGCTGTCCTC -3'
(R):5'- AGGAACTCTGAAGTGAGCACCC -3'

Sequencing Primer
(F):5'- TCCCGCCAGATGTCTGCAG -3'
(R):5'- TGAAGTGAGCACCCGGTCC -3'
Posted On 2019-10-17