Mutagenetix > Incidental Mutation

Incidental Mutation 'R7500:Rnf169'

581424

Institutional Source

Beutler Lab

Gene Symbol

Rnf169

Ensembl Gene

ENSMUSG00000058761

Gene Name

ring finger protein 169

Synonyms

2900057K09Rik

MMRRC Submission

045573-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.155) question?

Stock #

R7500 (G1)

Quality Score

194.009

Status

Not validated

Chromosome

Chromosomal Location

99569461-99629655 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 99629445 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 66 (E66G)

Ref Sequence

ENSEMBL: ENSMUSP00000079631 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000080817]

AlphaFold

E9Q7F2

Predicted Effect

probably damaging
Transcript: ENSMUST00000080817
AA Change: E66G

PolyPhen 2 Score 0.992 (Sensitivity: 0.70; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000079631
Gene: ENSMUSG00000058761
AA Change: E66G

Domain	Start	End	E-Value	Type
low complexity region	2	27	N/A	INTRINSIC
low complexity region	32	46	N/A	INTRINSIC
RING	61	96	3.16e-1	SMART
Blast:RING	133	176	7e-8	BLAST
low complexity region	302	314	N/A	INTRINSIC
low complexity region	649	661	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

98% (49/50)

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acaa1a	A	G	9: 119,173,564 (GRCm39)	M146V	probably benign	Het
Adcy1	C	T	11: 7,094,762 (GRCm39)	R563C	probably damaging	Het
Ambn	A	T	5: 88,609,493 (GRCm39)	Y67F	possibly damaging	Het
Ankrd42	T	A	7: 92,241,080 (GRCm39)	E426D	probably benign	Het
Ankzf1	A	G	1: 75,174,623 (GRCm39)	T538A	probably benign	Het
Arhgap20	A	G	9: 51,751,802 (GRCm39)	I418V	probably benign	Het
Arhgef28	A	G	13: 98,115,003 (GRCm39)	Y616H	probably benign	Het
B4galt4	T	C	16: 38,588,376 (GRCm39)	F340S	probably damaging	Het
Bmp1	C	T	14: 70,727,562 (GRCm39)	E674K	probably benign	Het
Ccr9	T	A	9: 123,608,534 (GRCm39)	V72D	probably damaging	Het
Chd2	T	A	7: 73,101,556 (GRCm39)	K1390I	probably damaging	Het
Col5a3	C	T	9: 20,711,585 (GRCm39)	R513Q	unknown	Het
Cracd	A	G	5: 76,805,905 (GRCm39)	R126G	unknown	Het
Cttnbp2	G	T	6: 18,378,419 (GRCm39)	N1472K	probably benign	Het
Edn3	A	G	2: 174,621,328 (GRCm39)		probably null	Het
Eps15l1	A	G	8: 73,136,634 (GRCm39)	F331L	probably damaging	Het
Gm45337	CACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCTACAGCCTCC	CACAGCCTCC	7: 141,698,021 (GRCm39)		probably benign	Het
Lrrc56	A	G	7: 140,789,443 (GRCm39)	S487G	probably benign	Het
Moxd2	A	G	6: 40,868,746 (GRCm39)	T93A	probably benign	Het
Ngp	G	T	9: 110,248,833 (GRCm39)		probably null	Het
Npr2	T	C	4: 43,650,415 (GRCm39)	V970A	probably damaging	Het
Or4a79	T	C	2: 89,552,281 (GRCm39)	Y58C	possibly damaging	Het
Or5an10	T	C	19: 12,276,041 (GRCm39)	S152G	probably damaging	Het
Or8b9	T	C	9: 37,766,314 (GRCm39)	S67P	probably damaging	Het
Or8g28	T	G	9: 39,169,762 (GRCm39)	I69L	probably benign	Het
Pacc1	A	G	1: 191,078,910 (GRCm39)		probably null	Het
Pdf	A	T	8: 107,773,781 (GRCm39)	F221I	probably damaging	Het
Plekhn1	A	C	4: 156,317,771 (GRCm39)	S205R	probably benign	Het
Ppp6r1	G	A	7: 4,639,129 (GRCm39)	A606V	probably benign	Het
Prpf38b	C	T	3: 108,812,446 (GRCm39)	V256I	probably benign	Het
Rbbp5	T	A	1: 132,421,879 (GRCm39)	H291Q	probably benign	Het
Rp1	T	A	1: 4,381,501 (GRCm39)	N328Y	unknown	Het
Skint5	A	T	4: 113,417,035 (GRCm39)	V1138E	unknown	Het
Slc27a4	T	C	2: 29,702,717 (GRCm39)	V539A	probably damaging	Het
Smo	G	T	6: 29,755,534 (GRCm39)	R402L	probably benign	Het
Srgap2	A	T	1: 131,364,569 (GRCm39)	L4Q	probably damaging	Het
Tbxas1	A	T	6: 38,959,146 (GRCm39)	R110*	probably null	Het
Thoc7	A	C	14: 13,951,204 (GRCm38)		probably null	Het
Tmub1	G	A	5: 24,652,507 (GRCm39)		probably benign	Het
Tnrc6a	A	G	7: 122,772,673 (GRCm39)		probably null	Het
Traj19	T	A	14: 54,437,860 (GRCm39)	H6Q	unknown	Het
Trim30c	T	C	7: 104,036,758 (GRCm39)	E200G	probably benign	Het
Ubqlnl	A	T	7: 103,798,048 (GRCm39)	I483N	probably damaging	Het
Usp25	G	T	16: 76,874,089 (GRCm39)	R555L	probably damaging	Het
Vgll4	A	G	6: 114,839,293 (GRCm39)	S233P	probably damaging	Het
Vps13b	G	A	15: 35,910,670 (GRCm39)	C3478Y	possibly damaging	Het
Vwa8	T	A	14: 79,162,686 (GRCm39)		probably null	Het
Zfp977	A	G	7: 42,229,629 (GRCm39)	Y299H	probably damaging	Het
Zmynd11	T	A	13: 9,785,434 (GRCm39)	H17L	probably benign	Het

Other mutations in Rnf169

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01476:Rnf169	APN	7	99,604,691 (GRCm39)	missense	probably damaging	1.00
IGL02344:Rnf169	APN	7	99,575,642 (GRCm39)	missense	probably damaging	1.00
IGL03066:Rnf169	APN	7	99,574,760 (GRCm39)	missense	possibly damaging	0.85
R0201:Rnf169	UTSW	7	99,575,210 (GRCm39)	missense	possibly damaging	0.85
R1087:Rnf169	UTSW	7	99,592,204 (GRCm39)	missense	probably benign	0.01
R1289:Rnf169	UTSW	7	99,574,943 (GRCm39)	missense	probably benign	0.01
R1476:Rnf169	UTSW	7	99,574,535 (GRCm39)	missense	possibly damaging	0.72
R1912:Rnf169	UTSW	7	99,575,461 (GRCm39)	missense	probably damaging	1.00
R1964:Rnf169	UTSW	7	99,574,732 (GRCm39)	missense	probably damaging	1.00
R2057:Rnf169	UTSW	7	99,574,615 (GRCm39)	missense	probably damaging	1.00
R2342:Rnf169	UTSW	7	99,574,652 (GRCm39)	missense	possibly damaging	0.87
R4755:Rnf169	UTSW	7	99,574,930 (GRCm39)	missense	probably benign	0.01
R4801:Rnf169	UTSW	7	99,575,653 (GRCm39)	missense	probably damaging	1.00
R4802:Rnf169	UTSW	7	99,575,653 (GRCm39)	missense	probably damaging	1.00
R5391:Rnf169	UTSW	7	99,584,367 (GRCm39)	critical splice donor site	probably null
R5395:Rnf169	UTSW	7	99,584,367 (GRCm39)	critical splice donor site	probably null
R5643:Rnf169	UTSW	7	99,576,338 (GRCm39)	missense	possibly damaging	0.85
R5817:Rnf169	UTSW	7	99,574,976 (GRCm39)	missense	probably benign	0.02
R5952:Rnf169	UTSW	7	99,574,840 (GRCm39)	missense	probably damaging	1.00
R6009:Rnf169	UTSW	7	99,576,330 (GRCm39)	missense	possibly damaging	0.92
R6453:Rnf169	UTSW	7	99,584,434 (GRCm39)	missense	probably benign	0.01
R7238:Rnf169	UTSW	7	99,574,954 (GRCm39)	missense	probably benign	0.10
R8194:Rnf169	UTSW	7	99,575,651 (GRCm39)	missense	probably damaging	1.00
R9227:Rnf169	UTSW	7	99,574,699 (GRCm39)	missense	possibly damaging	0.82
R9469:Rnf169	UTSW	7	99,575,567 (GRCm39)	missense	possibly damaging	0.92
R9548:Rnf169	UTSW	7	99,574,690 (GRCm39)	missense	probably damaging	1.00
R9729:Rnf169	UTSW	7	99,575,477 (GRCm39)	missense	probably damaging	1.00
Z1177:Rnf169	UTSW	7	99,575,068 (GRCm39)	missense	not run

Predicted Primers

PCR Primer
(F):5'- TTCAACACGCGTACAGTTCG -3'
(R):5'- TCTCCCTTCAAACGGGAAAC -3'

Sequencing Primer
(F):5'- GTACAGTTCGCTCCAAAGTTC -3'
(R):5'- TCCCTTCAAACGGGAAACAAGATG -3'

Posted On

2019-10-17